RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 ZNF788Q6ZQV5 615 aa8.53□□□□□ -1.04
UFD1-206ENST00000466373 Q9UFV3 132 aa8.53□□□□□ -1.04
UFD1-206ENST00000466373 ABCA4P78363 2273 aa8.53□□□□□ -1.04
UFD1-206ENST00000466373 J3QR06 171 aa8.52□□□□□ -1.04
UFD1-206ENST00000466373 OR4A8P0C604 315 aa8.52□□□□□ -1.04
UFD1-206ENST00000466373 STAG3L2P0CL84 134 aa8.52□□□□□ -1.04
UFD1-206ENST00000466373 STAG3L3P0CL85 134 aa8.52□□□□□ -1.04
UFD1-206ENST00000466373 TCF15Q12870 199 aa8.52□□□□□ -1.04
UFD1-206ENST00000466373 ZNF439Q8NDP4 499 aa8.52□□□□□ -1.04
UFD1-206ENST00000466373 OR2T10Q8NGZ9 312 aa8.52□□□□□ -1.04
UFD1-206ENST00000466373 ABHD17AQ96GS6 310 aa8.52□□□□□ -1.04
UFD1-206ENST00000466373 PACRGQ96M98 296 aaPredicted RBP8.52□□□□□ -1.04
UFD1-206ENST00000466373 LSM4Q9Y4Z0 139 aaKnown RBP8.52□□□□□ -1.04
UFD1-206ENST00000466373 ASH1LQ9NR48 2969 aaKnown RBP8.52□□□□□ -1.05
UFD1-206ENST00000466373 PDE6DO43924 150 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 EFNB3Q15768 340 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 TMEM108Q6UXF1 575 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 DOLPP1Q86YN1 238 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 OR10W1Q8NGF6 305 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 CCL17Q92583 94 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 RAB1CQ92928 201 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 HIST1H2BLQ99880 126 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 SLC35D1Q9NTN3 355 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 FOXA2Q9Y261 457 aaPredicted RBP8.52□□□□□ -1.05
UFD1-206ENST00000466373 TP53TG5Q9Y2B4 290 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 YTHDF2Q9Y5A9 579 aaKnown RBP8.52□□□□□ -1.05
UFD1-206ENST00000466373 ELOA3CA0A087WX78 387 aaPredicted RBP8.52□□□□□ -1.05
UFD1-206ENST00000466373 TRGV8A0A0C4DH27 118 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 XKRY2A2RUG3 117 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 DPRXA6NFQ7 191 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 TMPRSS3P57727 454 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 BSPH1Q075Z2 132 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 OR4P4Q8NGL7 312 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 FAM216AQ8WUB2 273 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 ANAPC16Q96DE5 110 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 PYGO2Q9BRQ0 406 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 PLEKHA3Q9HB20 300 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 KCNIP2Q9NS61 270 aa8.52□□□□□ -1.05
UFD1-206ENST00000466373 CXorf1O96002 111 aa8.51□□□□□ -1.05
UFD1-206ENST00000466373 RPL31P62899 125 aaKnown RBP8.51□□□□□ -1.05
UFD1-206ENST00000466373 FAM209BQ5JX69 171 aa8.51□□□□□ -1.05
UFD1-206ENST00000466373 H1FXQ92522 213 aaKnown RBP8.51□□□□□ -1.05
UFD1-206ENST00000466373 RAB9BQ9NP90 201 aa8.51□□□□□ -1.05
UFD1-206ENST00000466373 SLC25A10Q9UBX3 287 aaPredicted RBP8.51□□□□□ -1.05
UFD1-206ENST00000466373 RPUSD1Q9UJJ7 312 aaKnown RBP8.51□□□□□ -1.05
UFD1-206ENST00000466373 PITPNC1Q9UKF7 332 aa8.51□□□□□ -1.05
UFD1-206ENST00000466373 ZNF729A6NN14 1252 aaPredicted RBP8.51□□□□□ -1.05
UFD1-206ENST00000466373 C16orf97H3BN30 126 aa8.51□□□□□ -1.05
UFD1-206ENST00000466373 TGOLN2O43493 480 aa8.51□□□□□ -1.05
UFD1-206ENST00000466373 VENTXO95231 258 aa8.51□□□□□ -1.05
UFD1-206ENST00000466373 ADIPOQQ15848 244 aa8.51□□□□□ -1.05
UFD1-206ENST00000466373 WFIKKN1Q96NZ8 548 aa8.51□□□□□ -1.05
UFD1-206ENST00000466373 PFDN5Q99471 154 aa8.51□□□□□ -1.05
UFD1-206ENST00000466373 ZNF320A2RRD8 509 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 PRRG2O14669 202 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 LY86O95711 162 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 GCHFRP30047 84 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 DIAPH2-AS1Q14236 149 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 GAMTQ14353 236 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 MIR17HGQ75NE6 70 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.5□□□□□ -1.05
UFD1-206ENST00000466373 IGKV1OR2-108A0A075B7D4 117 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 hADV38S2A0JD32 116 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 ITGB1BP1O14713 200 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 FCN3O75636 299 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 IGHV3-48P01763 117 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 SAA1P0DJI8 122 aaPredicted RBP8.5□□□□□ -1.05
UFD1-206ENST00000466373 IL3RAP26951 378 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 RAB31Q13636 194 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 RTL8BQ17RB0 113 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 KRTCAP3Q53RY4 240 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 SLC25A48Q6ZT89 311 aaKnown RBP8.5□□□□□ -1.05
UFD1-206ENST00000466373 SGMS2Q8NHU3 365 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 MRPL20Q9BYC9 149 aaKnown RBP8.5□□□□□ -1.05
UFD1-206ENST00000466373 TEX50A0A1B0GTY4 177 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 C17orf100A8MU93 164 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 F6UZH7 168 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 CHRNB4P30926 498 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 RHOBP62745 196 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 OR1P1Q8NH06 330 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 OCC1Q8TAD7 63 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 ADTRPQ96IZ2 230 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 SAP30LQ9HAJ7 183 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 DMRT1Q9Y5R6 373 aa8.5□□□□□ -1.05
UFD1-206ENST00000466373 MKRN2OSH3BPM6 223 aa8.49□□□□□ -1.05
UFD1-206ENST00000466373 UPK2O00526 184 aa8.49□□□□□ -1.05
UFD1-206ENST00000466373 TNFRSF1AP19438 455 aa8.49□□□□□ -1.05
UFD1-206ENST00000466373 NUBP1P53384 320 aa8.49□□□□□ -1.05
UFD1-206ENST00000466373 PRB3Q04118 309 aaPredicted RBP8.49□□□□□ -1.05
UFD1-206ENST00000466373 C3orf36Q3SXR2 165 aa8.49□□□□□ -1.05
UFD1-206ENST00000466373 PRR30Q53SZ7 412 aaPredicted RBP8.49□□□□□ -1.05
UFD1-206ENST00000466373 KCNIP4Q6PIL6 250 aa8.49□□□□□ -1.05
UFD1-206ENST00000466373 LYPD2Q6UXB3 125 aa8.49□□□□□ -1.05
UFD1-206ENST00000466373 TMEM183AQ8IXX5 376 aa8.49□□□□□ -1.05
UFD1-206ENST00000466373 SFRP2Q96HF1 295 aa8.49□□□□□ -1.05
UFD1-206ENST00000466373 HARBI1Q96MB7 349 aa8.49□□□□□ -1.05
UFD1-206ENST00000466373 PRO1933Q9H354 126 aa8.49□□□□□ -1.05
UFD1-206ENST00000466373 PRNDQ9UKY0 176 aa8.49□□□□□ -1.05
UFD1-206ENST00000466373 PTPRQQ9UMZ3 2332 aa8.49□□□□□ -1.05
UFD1-206ENST00000466373 A0A1B0GUS0 222 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms