RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 GUK1Q16774 197 aa0.72□□□□□ -2.29
CCDC93-205ENST00000466171 FAM173BQ6P4H8 233 aa0.72□□□□□ -2.29
CCDC93-205ENST00000466171 ALKAL1Q6UXT8 129 aa0.72□□□□□ -2.29
CCDC93-205ENST00000466171 Q6ZS49 121 aa0.72□□□□□ -2.29
CCDC93-205ENST00000466171 TRAPPC5Q8IUR0 188 aa0.72□□□□□ -2.29
CCDC93-205ENST00000466171 TMEM86BQ8N661 226 aa0.72□□□□□ -2.29
CCDC93-205ENST00000466171 ZNF563Q8TA94 476 aa0.72□□□□□ -2.29
CCDC93-205ENST00000466171 SLC35B4Q969S0 331 aa0.72□□□□□ -2.29
CCDC93-205ENST00000466171 HSPB9Q9BQS6 159 aa0.72□□□□□ -2.29
CCDC93-205ENST00000466171 MRPL32Q9BYC8 188 aaKnown RBP0.72□□□□□ -2.29
CCDC93-205ENST00000466171 WDR61Q9GZS3 305 aaKnown RBP0.72□□□□□ -2.29
CCDC93-205ENST00000466171 XAGE1AQ9HD64 81 aa0.72□□□□□ -2.29
CCDC93-205ENST00000466171 IL36BQ9NZH7 164 aa0.72□□□□□ -2.29
CCDC93-205ENST00000466171 DCCP43146 1447 aa0.72□□□□□ -2.29
CCDC93-205ENST00000466171 MEIS3P1A6NDR6 274 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 CIAO1O76071 339 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 KRT75O95678 551 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 OR5G3P0C626 314 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 RPS4Y1P22090 263 aaKnown RBP0.71□□□□□ -2.3
CCDC93-205ENST00000466171 EVX1P49640 407 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 SULT1A1P50225 295 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 CEBPGP53567 150 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 SUPT4H1P63272 117 aaKnown RBP0.71□□□□□ -2.3
CCDC93-205ENST00000466171 UBE2IP63279 158 aaKnown RBP0.71□□□□□ -2.3
CCDC93-205ENST00000466171 HBA1P69905 142 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 RPL18Q07020 188 aaKnown RBP0.71□□□□□ -2.3
CCDC93-205ENST00000466171 MOGQ16653 247 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 HIST3H3Q16695 136 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 ARHGAP11BQ3KRB8 267 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 AADACL3Q5VUY0 350 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 DCXRQ7Z4W1 244 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 RPP25LQ8N5L8 163 aaKnown RBP0.71□□□□□ -2.3
CCDC93-205ENST00000466171 ANKRD29Q8N6D5 301 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 MNS1Q8NEH6 495 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 OR8J2Q8NGG1 315 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 MCFD2Q8NI22 146 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 IMP4Q96G21 291 aaKnown RBP0.71□□□□□ -2.3
CCDC93-205ENST00000466171 PPP1R2P1Q96PQ5 205 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 CHST6Q9GZX3 395 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 RSL24D1Q9UHA3 163 aaKnown RBP0.71□□□□□ -2.3
CCDC93-205ENST00000466171 SCAF11Q99590 1463 aaKnown RBP0.71□□□□□ -2.3
CCDC93-205ENST00000466171 CACNA1GO43497 2377 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 ICE1Q9Y2F5 2266 aa0.71□□□□□ -2.3
CCDC93-205ENST00000466171 KIF24Q5T7B8 1368 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 DISP1Q96F81 1524 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 COL4A1P02462 1669 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 MEIKINA0A087WXM9 373 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 TRBV6-5A0A0K0K1A5 114 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 TRBV10-2A0A0K0K1G8 114 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 OR51F1A6NGY5 319 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 CLDN24A6NM45 220 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 FABP5P3A8MUU1 101 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 SDCBPO00560 298 aaPredicted RBP0.7□□□□□ -2.3
CCDC93-205ENST00000466171 CHP2O43745 196 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 RPP14O95059 124 aaKnown RBP0.7□□□□□ -2.3
CCDC93-205ENST00000466171 CRYZL1O95825 349 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 IGKV1-5P01602 117 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 HLA-DRB1P01911 266 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 PRB1P04280 392 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 PRM2P04554 102 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 UBBP0CG47 229 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 ZNF705BP0CI00 300 aaPredicted RBP0.7□□□□□ -2.3
CCDC93-205ENST00000466171 HIST1H2BOP23527 126 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 HIST1H2BBP33778 126 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 AKR1C3P42330 323 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 RPL5P46777 297 aaKnown RBP0.7□□□□□ -2.3
CCDC93-205ENST00000466171 OMPP47874 163 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 HIST1H2BDP58876 126 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 PSME3P61289 254 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 SNRPD2P62316 118 aaKnown RBP0.7□□□□□ -2.3
CCDC93-205ENST00000466171 HIST1H2BCP62807 126 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 AESQ08117 197 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 ELOBQ15370 118 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 KISS1Q15726 138 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 NDUFA5Q16718 116 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 HIST2H2BEQ16778 126 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 IMPG1Q17R60 797 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.7□□□□□ -2.3
CCDC93-205ENST00000466171 SPOPLQ6IQ16 392 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 FP248Q71RG6 208 aaPredicted RBP0.7□□□□□ -2.3
CCDC93-205ENST00000466171 BPIFA4PQ86YQ2 179 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 DYNAPQ8N1N2 210 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 CLDN22Q8N7P3 220 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 MRPL30Q8TCC3 161 aaKnown RBP0.7□□□□□ -2.3
CCDC93-205ENST00000466171 MBD3L1Q8WWY6 194 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 DNAJC9Q8WXX5 260 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 HIST1H2BHQ93079 126 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 DCUN1D1Q96GG9 259 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 C8orf76Q96K31 380 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 Q96M85 177 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 HIST1H2BNQ99877 126 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 HIST1H2BMQ99879 126 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 NAA38Q9BRA0 125 aaKnown RBP0.7□□□□□ -2.3
CCDC93-205ENST00000466171 GINS4Q9BRT9 223 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 ULBP3Q9BZM4 244 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 COMMD5Q9GZQ3 224 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 C11orf68Q9H3H3 251 aaKnown RBP0.7□□□□□ -2.3
CCDC93-205ENST00000466171 PRTFDC1Q9NRG1 225 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 TP73-AS1Q9UF72 201 aa0.7□□□□□ -2.3
CCDC93-205ENST00000466171 WRNQ14191 1432 aaPredicted RBP eCLIP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms