RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 ANKRD55Q3KP44 614 aa9.34□□□□□ -0.91
SOX2-OT-203ENST00000466034 DHRS11Q6UWP2 260 aa9.34□□□□□ -0.91
SOX2-OT-203ENST00000466034 HSD17B13Q7Z5P4 300 aaPredicted RBP9.34□□□□□ -0.91
SOX2-OT-203ENST00000466034 CROCCP3Q8IVE0 287 aa9.34□□□□□ -0.91
SOX2-OT-203ENST00000466034 VN1R17PQ8TDU5 208 aa9.34□□□□□ -0.91
SOX2-OT-203ENST00000466034 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
SOX2-OT-203ENST00000466034 QTRT1Q9BXR0 403 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-203ENST00000466034 ZNF436Q9C0F3 470 aaPredicted RBP9.34□□□□□ -0.91
SOX2-OT-203ENST00000466034 COMMD5Q9GZQ3 224 aa9.34□□□□□ -0.91
SOX2-OT-203ENST00000466034 TMEM140Q9NV12 185 aa9.34□□□□□ -0.91
SOX2-OT-203ENST00000466034 THYN1Q9P016 225 aa9.34□□□□□ -0.91
SOX2-OT-203ENST00000466034 S4R3C0 116 aa9.34□□□□□ -0.91
SOX2-OT-203ENST00000466034 ZNF320A2RRD8 509 aa9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 CYB5BO43169 146 aa9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 S1PR2O95136 353 aa9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 NAT1P18440 290 aa9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 HERV-K104P61576 105 aa9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 NEDD8Q15843 81 aa9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 KCTD21Q4G0X4 260 aa9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 AADACL3Q5VUY0 350 aa9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 UNQ9165/PRO28630Q6UXU0 137 aa9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 TMEM17Q86X19 198 aa9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 GDPD1Q8N9F7 314 aa9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 OR51H1Q8NH63 302 aa9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 ATP6V0BQ99437 205 aa9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 MRPL27Q9P0M9 148 aaKnown RBP9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 UFC1Q9Y3C8 167 aa9.33□□□□□ -0.92
SOX2-OT-203ENST00000466034 JTBO76095 146 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 TRAPPC2P0DI81 140 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 TRAPPC2BP0DI82 140 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 F2RP25116 425 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 GPR183P32249 361 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 TM4SF20Q53R12 229 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 UBE2NLQ5JXB2 153 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 BTNL8Q6UX41 500 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 DMBX1Q8NFW5 382 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 OR52B4Q8NGK2 314 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 OR1L8Q8NGR8 309 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 MOB3AQ96BX8 217 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 S100A16Q96FQ6 103 aaKnown RBP9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 GGTLC1Q9BX51 225 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 IFT46Q9NQC8 304 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 EHFQ9NZC4 300 aa9.32□□□□□ -0.92
SOX2-OT-203ENST00000466034 LOC102724200A0A096LPH7 203 aaPredicted RBP9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 TEX50A0A1B0GTY4 177 aa9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 MEIS3P1A6NDR6 274 aa9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 MARCH11A6NNE9 402 aa9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 TGOLN2O43493 480 aa9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 FCER2P06734 321 aa9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 SERPINE2P07093 398 aa9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 ERVK-16P61578 105 aa9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 WT1-ASQ06250 92 aa9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 PLET1Q6UQ28 207 aa9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 OR10W1Q8NGF6 305 aa9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 TMEM190Q8WZ59 177 aa9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 ZNF2Q9BSG1 426 aaPredicted RBP9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 C5orf66Q9H5L9 145 aa9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 NDUFA4L2Q9NRX3 87 aa9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 KMT2AQ03164 3969 aa9.31□□□□□ -0.92
SOX2-OT-203ENST00000466034 ELOA3CA0A087WX78 387 aaPredicted RBP9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 PGLYRP1O75594 196 aaPredicted RBP9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 SCAF4O95104 1147 aaKnown RBP9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 OR13C7P0DN81 318 aa9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 RFX2P48378 723 aa9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 TAS2R46P59540 309 aa9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 TAS2R20P59543 309 aa9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 ZNF585BQ52M93 769 aa9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 SPSB3Q6PJ21 355 aa9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 RBPMS2Q6ZRY4 209 aaKnown RBP9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 OR1L6Q8NGR2 347 aa9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 LSM10Q969L4 123 aaKnown RBP9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 BSCL2Q96G97 398 aaPredicted RBP9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 SPAG8Q99932 426 aaPredicted RBP9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 OVOL2Q9BRP0 275 aa9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 FXYD6Q9H0Q3 95 aa9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 FAM212BQ9NTI7 297 aaPredicted RBP9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 F11RQ9Y624 299 aaKnown RBP9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 SELENOKQ9Y6D0 94 aa9.3□□□□□ -0.92
SOX2-OT-203ENST00000466034 GPR31O00270 319 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 NDUFA4O00483 81 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 TSPAN4O14817 238 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 RLN1P04808 185 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 TGFBR1P36897 503 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 RPS19P39019 145 aaKnown RBP9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 LPAR6P43657 344 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 MFAP2P55001 183 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 TMEM69Q5SWH9 247 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 SLC25A24Q6NUK1 477 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 WFDC3Q8IUB2 231 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 CMTM1Q8IZ96 169 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 SLC38A6Q8IZM9 456 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 OR2C3Q8N628 320 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 OR5H2Q8NGV7 314 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 FCAMRQ8WWV6 532 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 DGCR14Q96DF8 476 aaKnown RBP9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 YIPF6Q96EC8 236 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 DAZ1Q9NQZ3 744 aaKnown RBP9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 TP53TG1Q9Y2A0 90 aa9.29□□□□□ -0.92
SOX2-OT-203ENST00000466034 IGHV3-35A0A0C4DH35 117 aa9.28□□□□□ -0.92
SOX2-OT-203ENST00000466034 OR2T8A6NH00 312 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms