RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 OR13A1Q8NGR1 328 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 TCF19Q9Y242 345 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 R4GN57 208 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 IGHV3-43A0A0B4J1X8 118 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 IGHV3-43DP0DP04 118 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 CRYBB3P26998 211 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 CDKN1BP46527 198 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 DOLPP1Q86YN1 238 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 RNASE8Q8TDE3 154 aaKnown RBP16.3■□□□□ 0.2
SDF4-205ENST00000465727 RNASE7Q9H1E1 156 aaKnown RBP16.3■□□□□ 0.2
SDF4-205ENST00000465727 TUBG2Q9NRH3 451 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 LOXL2Q9Y4K0 774 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 CACNA1DQ01668 2161 aa16.29■□□□□ 0.2
SDF4-205ENST00000465727 COTL1Q14019 142 aa16.29■□□□□ 0.2
SDF4-205ENST00000465727 PSG5Q15238 335 aa16.29■□□□□ 0.2
SDF4-205ENST00000465727 IBA57Q5T440 356 aaKnown RBP16.29■□□□□ 0.2
SDF4-205ENST00000465727 Q6ZR03 302 aa16.29■□□□□ 0.2
SDF4-205ENST00000465727 VASH2Q86V25 355 aa16.29■□□□□ 0.2
SDF4-205ENST00000465727 Q8TCH9 128 aa16.29■□□□□ 0.2
SDF4-205ENST00000465727 WIPF2Q8TF74 440 aaPredicted RBP16.29■□□□□ 0.2
SDF4-205ENST00000465727 COMMD5Q9GZQ3 224 aa16.29■□□□□ 0.2
SDF4-205ENST00000465727 WNT10AQ9GZT5 417 aa16.29■□□□□ 0.2
SDF4-205ENST00000465727 IZUMO1RA6ND01 250 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 C15orf65H3BRN8 121 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 SPINK4O60575 86 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 NPY1RP25929 384 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 CXCL12P48061 93 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 SLC24A4Q8NFF2 622 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 SLC25A40Q8TBP6 338 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 TMEM140Q9NV12 185 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 JPT1Q9UK76 154 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 DOCK10Q96BY6 2186 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 TET2Q6N021 2002 aaPredicted RBP16.28■□□□□ 0.2
SDF4-205ENST00000465727 IGHV2OR16-5A0A0B4J2B6 119 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 IGHV1-69-2A0A0G2JMI3 117 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 DEFB108AA8MXU0 73 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 WNT9BO14905 357 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 PROP1O75360 226 aa16.28■□□□□ 0.2
SDF4-205ENST00000465727 TECRQ9NZ01 308 aaKnown RBP16.28■□□□□ 0.2
SDF4-205ENST00000465727 MUC3AQ02505 3323 aa16.27■□□□□ 0.2
SDF4-205ENST00000465727 NCOR1O75376 2440 aa16.27■□□□□ 0.2
SDF4-205ENST00000465727 TRAV9-2A0A087WT02 112 aa16.27■□□□□ 0.2
SDF4-205ENST00000465727 IGHV3-64DA0A0J9YX35 117 aa16.27■□□□□ 0.2
SDF4-205ENST00000465727 MAGEA5P43359 124 aa16.27■□□□□ 0.2
SDF4-205ENST00000465727 ALKBH6Q3KRA9 238 aa16.27■□□□□ 0.2
SDF4-205ENST00000465727 MIR17HGQ75NE6 70 aa16.27■□□□□ 0.2
SDF4-205ENST00000465727 C18orf32Q8TCD1 76 aa16.27■□□□□ 0.2
SDF4-205ENST00000465727 NEUROG1Q92886 237 aa16.27■□□□□ 0.2
SDF4-205ENST00000465727 C19orf24Q9BVV8 132 aa16.27■□□□□ 0.2
SDF4-205ENST00000465727 TTTY12Q9BZ98 90 aa16.27■□□□□ 0.2
SDF4-205ENST00000465727 OBP2BQ9NPH6 170 aa16.27■□□□□ 0.2
SDF4-205ENST00000465727 ZNF331Q9NQX6 463 aaPredicted RBP16.27■□□□□ 0.2
SDF4-205ENST00000465727 C15orf61A6NNL5 157 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 LINC00869P0C866 280 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 PPOXP50336 477 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 DUSP3P51452 185 aaPredicted RBP16.26■□□□□ 0.19
SDF4-205ENST00000465727 FXYD3Q14802 87 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 MRPL54Q6P161 138 aaKnown RBP16.26■□□□□ 0.19
SDF4-205ENST00000465727 C11orf53Q8IXP5 236 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 RFESDQ8TAC1 157 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 S1PR3Q99500 378 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 CLEC7AQ9BXN2 247 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 C12orf49Q9H741 205 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 BDP1A6H8Y1 2624 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 M0R1X1 148 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 USF1P22415 310 aaPredicted RBP16.26■□□□□ 0.19
SDF4-205ENST00000465727 HINT1P49773 126 aaPredicted RBP16.26■□□□□ 0.19
SDF4-205ENST00000465727 TAS2R45P59539 299 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 SMIM21Q3B7S5 101 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 CXXC4Q9H2H0 198 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 FSCN3Q9NQT6 498 aa16.26■□□□□ 0.19
SDF4-205ENST00000465727 TRAV34A0A0B4J273 112 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 A0A1W2PRE2 83 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 IGLV2-8P01709 118 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 NTF3P20783 257 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 TCL1AP56279 114 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 SLC35B1P78383 322 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 FAM19A2Q8N3H0 131 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 IGF2BP2-AS1Q96M15 143 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 ENY2Q9NPA8 101 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 FOXA2Q9Y261 457 aaPredicted RBP16.25■□□□□ 0.19
SDF4-205ENST00000465727 DOCK7Q96N67 2140 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 IGHV2-70DA0A0C4DH43 119 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 IGFBP2P18065 325 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 TNFSF4P23510 183 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 TBR1Q16650 682 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 ZNF826PQ6ZT77 177 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 VKORC1L1Q8N0U8 176 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 OR4S2Q8NH73 311 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 GNG12Q9UBI6 72 aa16.25■□□□□ 0.19
SDF4-205ENST00000465727 WDFY3Q8IZQ1 3526 aa16.24■□□□□ 0.19
SDF4-205ENST00000465727 TRAV3A0A0B4J244 114 aa16.24■□□□□ 0.19
SDF4-205ENST00000465727 IGLC7A0M8Q6 106 aa16.24■□□□□ 0.19
SDF4-205ENST00000465727 KLF5Q13887 457 aaPredicted RBP16.24■□□□□ 0.19
SDF4-205ENST00000465727 UNQ5815/PRO19632Q6UWF5 114 aa16.24■□□□□ 0.19
SDF4-205ENST00000465727 WDR82Q6UXN9 313 aa16.24■□□□□ 0.19
SDF4-205ENST00000465727 TPRX1Q8N7U7 411 aa16.24■□□□□ 0.19
SDF4-205ENST00000465727 NABP2Q9BQ15 211 aa16.24■□□□□ 0.19
SDF4-205ENST00000465727 ALKBH7Q9BT30 221 aaPredicted RBP16.24■□□□□ 0.19
SDF4-205ENST00000465727 PLEKHA3Q9HB20 300 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms