RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 C16orf82Q7Z2V1 217 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 OR1L8Q8NGR8 309 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 TAF15Q92804 592 aaKnown RBP eCLIP13.63□□□□□ -0.23
PTPRU-206ENST00000465525 FKBP11Q9NYL4 201 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 SYNGR2O43760 224 aa13.62□□□□□ -0.23
PTPRU-206ENST00000465525 GPR137BO60478 399 aa13.62□□□□□ -0.23
PTPRU-206ENST00000465525 HLA-DRB1P01911 266 aa13.62□□□□□ -0.23
PTPRU-206ENST00000465525 HOXA1P49639 335 aaPredicted RBP13.62□□□□□ -0.23
PTPRU-206ENST00000465525 SPCS3P61009 180 aa13.62□□□□□ -0.23
PTPRU-206ENST00000465525 SRSF12Q8WXF0 261 aaKnown RBP13.62□□□□□ -0.23
PTPRU-206ENST00000465525 PARP11Q9NR21 331 aa13.62□□□□□ -0.23
PTPRU-206ENST00000465525 ZNF257Q9Y2Q1 563 aa13.62□□□□□ -0.23
PTPRU-206ENST00000465525 FBXO7Q9Y3I1 522 aa13.62□□□□□ -0.23
PTPRU-206ENST00000465525 MSGN1A6NI15 193 aa13.61□□□□□ -0.23
PTPRU-206ENST00000465525 REG1AP05451 166 aa13.61□□□□□ -0.23
PTPRU-206ENST00000465525 FGF2P09038 288 aa13.61□□□□□ -0.23
PTPRU-206ENST00000465525 MAS1LP35410 378 aa13.61□□□□□ -0.23
PTPRU-206ENST00000465525 PRCDQ00LT1 54 aa13.61□□□□□ -0.23
PTPRU-206ENST00000465525 NOXA1Q86UR1 476 aa13.61□□□□□ -0.23
PTPRU-206ENST00000465525 OR5B3Q8NH48 314 aa13.61□□□□□ -0.23
PTPRU-206ENST00000465525 ARPC1AQ92747 370 aa13.61□□□□□ -0.23
PTPRU-206ENST00000465525 RNF126Q9BV68 326 aa13.61□□□□□ -0.23
PTPRU-206ENST00000465525 NDUFA4L2Q9NRX3 87 aa13.61□□□□□ -0.23
PTPRU-206ENST00000465525 MBD2Q9UBB5 411 aa13.61□□□□□ -0.23
PTPRU-206ENST00000465525 FAM90A26D6RGX4 464 aa13.6□□□□□ -0.23
PTPRU-206ENST00000465525 H3BP45 60 aa13.6□□□□□ -0.23
PTPRU-206ENST00000465525 TMEM50AO95807 157 aa13.6□□□□□ -0.23
PTPRU-206ENST00000465525 RNASE1P07998 156 aaKnown RBP13.6□□□□□ -0.23
PTPRU-206ENST00000465525 UBA52P62987 128 aaKnown RBP13.6□□□□□ -0.23
PTPRU-206ENST00000465525 SRSF2Q01130 221 aaKnown RBP13.6□□□□□ -0.23
PTPRU-206ENST00000465525 ZNF562Q6V9R5 426 aa13.6□□□□□ -0.23
PTPRU-206ENST00000465525 OR52E5Q8NH55 327 aa13.6□□□□□ -0.23
PTPRU-206ENST00000465525 DTD1Q8TEA8 209 aa13.6□□□□□ -0.23
PTPRU-206ENST00000465525 ASB13Q8WXK3 278 aa13.6□□□□□ -0.23
PTPRU-206ENST00000465525 PLEKHA3Q9HB20 300 aa13.6□□□□□ -0.23
PTPRU-206ENST00000465525 CUBNO60494 3623 aa13.6□□□□□ -0.23
PTPRU-206ENST00000465525 FXYD6-FXYD2A0A087WZ82 144 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 TEX22C9J3V5 150 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 M0QZK8 103 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 ATP6V0E1O15342 81 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 DEDDO75618 318 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 C19orf35Q6ZS72 473 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 LURAP1LQ8IV03 231 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 OR11H4Q8NGC9 324 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 LINC00527Q9UJ94 153 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 MED6O75586 246 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 C1QBP02746 253 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 EGR2P11161 476 aaPredicted RBP13.59□□□□□ -0.23
PTPRU-206ENST00000465525 AREGP15514 252 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 VDAC2P45880 294 aaPredicted RBP13.59□□□□□ -0.23
PTPRU-206ENST00000465525 NKX2-5P52952 324 aaPredicted RBP13.59□□□□□ -0.23
PTPRU-206ENST00000465525 PAX9P55771 341 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 WT1-ASQ06250 92 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 TMEM95Q3KNT9 176 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 THAP6Q8TBB0 222 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 ENY2Q9NPA8 101 aa13.59□□□□□ -0.23
PTPRU-206ENST00000465525 HEYLQ9NQ87 328 aaPredicted RBP13.59□□□□□ -0.23
PTPRU-206ENST00000465525 IGLC7A0M8Q6 106 aa13.58□□□□□ -0.24
PTPRU-206ENST00000465525 FAM181BA6NEQ2 426 aa13.58□□□□□ -0.24
PTPRU-206ENST00000465525 TRIM77I1YAP6 450 aa13.58□□□□□ -0.24
PTPRU-206ENST00000465525 L7N2F9 121 aa13.58□□□□□ -0.24
PTPRU-206ENST00000465525 RLN2P04090 185 aa13.58□□□□□ -0.24
PTPRU-206ENST00000465525 RPL15P61313 204 aaKnown RBP13.58□□□□□ -0.24
PTPRU-206ENST00000465525 VAMP2P63027 116 aa13.58□□□□□ -0.24
PTPRU-206ENST00000465525 FGL1Q08830 312 aa13.58□□□□□ -0.24
PTPRU-206ENST00000465525 PDLIM3Q53GG5 364 aaPredicted RBP13.58□□□□□ -0.24
PTPRU-206ENST00000465525 PRSS54Q6PEW0 395 aa13.58□□□□□ -0.24
PTPRU-206ENST00000465525 DCUN1D4Q92564 292 aa13.58□□□□□ -0.24
PTPRU-206ENST00000465525 C11orf1Q9H5F2 150 aa13.58□□□□□ -0.24
PTPRU-206ENST00000465525 SETD2Q9BYW2 2564 aaPredicted RBP13.57□□□□□ -0.24
PTPRU-206ENST00000465525 OR13C7P0DN81 318 aa13.57□□□□□ -0.24
PTPRU-206ENST00000465525 ECSCRQ19T08 205 aa13.57□□□□□ -0.24
PTPRU-206ENST00000465525 SLC35E3Q7Z769 313 aa13.57□□□□□ -0.24
PTPRU-206ENST00000465525 LFNGQ8NES3 379 aa13.57□□□□□ -0.24
PTPRU-206ENST00000465525 PSENENQ9NZ42 101 aa13.57□□□□□ -0.24
PTPRU-206ENST00000465525 WSB1Q9Y6I7 421 aa13.57□□□□□ -0.24
PTPRU-206ENST00000465525 PET100P0DJ07 73 aa13.56□□□□□ -0.24
PTPRU-206ENST00000465525 SPANXN5Q5MJ07 72 aa13.56□□□□□ -0.24
PTPRU-206ENST00000465525 ASPHD1Q5U4P2 390 aa13.56□□□□□ -0.24
PTPRU-206ENST00000465525 NOL4LQ96MY1 436 aaPredicted RBP13.56□□□□□ -0.24
PTPRU-206ENST00000465525 OR4C12Q96R67 309 aa13.56□□□□□ -0.24
PTPRU-206ENST00000465525 NPFFR1Q9GZQ6 430 aa13.56□□□□□ -0.24
PTPRU-206ENST00000465525 HIPK2Q9H2X6 1198 aa13.56□□□□□ -0.24
PTPRU-206ENST00000465525 ZFP57Q9NU63 452 aa13.56□□□□□ -0.24
PTPRU-206ENST00000465525 NF1P21359 2839 aa13.56□□□□□ -0.24
PTPRU-206ENST00000465525 FAM24AA6NFZ4 105 aa13.56□□□□□ -0.24
PTPRU-206ENST00000465525 G3V318 75 aa13.56□□□□□ -0.24
PTPRU-206ENST00000465525 IGHG2P01859 326 aa13.56□□□□□ -0.24
PTPRU-206ENST00000465525 PVALBP20472 110 aaPredicted RBP13.56□□□□□ -0.24
PTPRU-206ENST00000465525 CAV2P51636 162 aa13.56□□□□□ -0.24
PTPRU-206ENST00000465525 TMEM267Q0VDI3 215 aaPredicted RBP13.56□□□□□ -0.24
PTPRU-206ENST00000465525 ARSJQ5FYB0 599 aaPredicted RBP13.56□□□□□ -0.24
PTPRU-206ENST00000465525 RAB40CQ96S21 281 aa13.56□□□□□ -0.24
PTPRU-206ENST00000465525 ZNF702PQ9H963 129 aa13.56□□□□□ -0.24
PTPRU-206ENST00000465525 A0A1W2PN81 502 aa13.55□□□□□ -0.24
PTPRU-206ENST00000465525 E5RGE8 158 aa13.55□□□□□ -0.24
PTPRU-206ENST00000465525 CRYBA1P05813 215 aa13.55□□□□□ -0.24
PTPRU-206ENST00000465525 CHRNA7P36544 502 aa13.55□□□□□ -0.24
PTPRU-206ENST00000465525 UNQ5815/PRO19632Q6UWF5 114 aa13.55□□□□□ -0.24
PTPRU-206ENST00000465525 OR5T1Q8NG75 326 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms