RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 GRPEL2Q8TAA5 225 aa13.7□□□□□ -0.22
CPSF4-209ENST00000465132 HSPB9Q9BQS6 159 aa13.7□□□□□ -0.22
CPSF4-209ENST00000465132 QTRT1Q9BXR0 403 aaKnown RBP13.7□□□□□ -0.22
CPSF4-209ENST00000465132 ENY2Q9NPA8 101 aa13.7□□□□□ -0.22
CPSF4-209ENST00000465132 TPSG1Q9NRR2 321 aa13.7□□□□□ -0.22
CPSF4-209ENST00000465132 TMEM14BQ9NUH8 114 aa13.7□□□□□ -0.22
CPSF4-209ENST00000465132 AURKAIP1Q9NWT8 199 aaPredicted RBP13.7□□□□□ -0.22
CPSF4-209ENST00000465132 DNAH3Q8TD57 4116 aa13.7□□□□□ -0.22
CPSF4-209ENST00000465132 PSMB11A5LHX3 300 aa13.69□□□□□ -0.22
CPSF4-209ENST00000465132 ATP6V0E1O15342 81 aa13.69□□□□□ -0.22
CPSF4-209ENST00000465132 IFNA17P01571 189 aa13.69□□□□□ -0.22
CPSF4-209ENST00000465132 HSPE1P61604 102 aaKnown RBP13.69□□□□□ -0.22
CPSF4-209ENST00000465132 PJVKQ0ZLH3 352 aa13.69□□□□□ -0.22
CPSF4-209ENST00000465132 Q6ZS46 218 aa13.69□□□□□ -0.22
CPSF4-209ENST00000465132 LYZL2Q7Z4W2 148 aa13.69□□□□□ -0.22
CPSF4-209ENST00000465132 UXS1Q8NBZ7 420 aa13.69□□□□□ -0.22
CPSF4-209ENST00000465132 OR5M8Q8NGP6 311 aa13.69□□□□□ -0.22
CPSF4-209ENST00000465132 OR52E5Q8NH55 327 aa13.69□□□□□ -0.22
CPSF4-209ENST00000465132 OR1S1Q8NH92 325 aa13.69□□□□□ -0.22
CPSF4-209ENST00000465132 LHFPL5Q8TAF8 219 aa13.69□□□□□ -0.22
CPSF4-209ENST00000465132 MSGN1A6NI15 193 aa13.68□□□□□ -0.22
CPSF4-209ENST00000465132 SH2D7A6NKC9 451 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-209ENST00000465132 SSNA1O43805 119 aa13.68□□□□□ -0.22
CPSF4-209ENST00000465132 MED6O75586 246 aa13.68□□□□□ -0.22
CPSF4-209ENST00000465132 HOXB5P09067 269 aa13.68□□□□□ -0.22
CPSF4-209ENST00000465132 OR9G9P0C7N8 305 aa13.68□□□□□ -0.22
CPSF4-209ENST00000465132 P0C879 139 aa13.68□□□□□ -0.22
CPSF4-209ENST00000465132 OXA1LQ15070 435 aa13.68□□□□□ -0.22
CPSF4-209ENST00000465132 NMSQ5H8A3 153 aa13.68□□□□□ -0.22
CPSF4-209ENST00000465132 TEX38Q6PEX7 206 aa13.68□□□□□ -0.22
CPSF4-209ENST00000465132 UNQ5815/PRO19632Q6UWF5 114 aa13.68□□□□□ -0.22
CPSF4-209ENST00000465132 OR4X2Q8NGF9 303 aa13.68□□□□□ -0.22
CPSF4-209ENST00000465132 OR1L6Q8NGR2 347 aa13.68□□□□□ -0.22
CPSF4-209ENST00000465132 FYTTD1Q96QD9 318 aaKnown RBP13.68□□□□□ -0.22
CPSF4-209ENST00000465132 SEC22CQ9BRL7 303 aa13.68□□□□□ -0.22
CPSF4-209ENST00000465132 CACNG5Q9UF02 275 aa13.68□□□□□ -0.22
CPSF4-209ENST00000465132 TEX50A0A1B0GTY4 177 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 FAM90A26D6RGX4 464 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 H3BUA1 57 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 OR2B8PP59922 312 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 SPCS3P61009 180 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 TATDN3Q17R31 274 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 ECSCRQ19T08 205 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 TMEM95Q3KNT9 176 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 TMEM65Q6PI78 240 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 WFDC9Q8NEX5 89 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 GPR146Q96CH1 333 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 RBMXL1Q96E39 390 aaKnown RBP13.67□□□□□ -0.22
CPSF4-209ENST00000465132 HINT2Q9BX68 163 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 PLEKHA3Q9HB20 300 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 ZFP57Q9NU63 452 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 TNCP24821 2201 aa13.67□□□□□ -0.22
CPSF4-209ENST00000465132 ELANEP08246 267 aa13.66□□□□□ -0.22
CPSF4-209ENST00000465132 ERHP84090 104 aaKnown RBP13.66□□□□□ -0.22
CPSF4-209ENST00000465132 PRCDQ00LT1 54 aa13.66□□□□□ -0.22
CPSF4-209ENST00000465132 AARDQ4LEZ3 155 aa13.66□□□□□ -0.22
CPSF4-209ENST00000465132 GGNBP1Q5YKI7 109 aa13.66□□□□□ -0.22
CPSF4-209ENST00000465132 GSG1LQ6UXU4 331 aa13.66□□□□□ -0.22
CPSF4-209ENST00000465132 LFNGQ8NES3 379 aa13.66□□□□□ -0.22
CPSF4-209ENST00000465132 OR52B4Q8NGK2 314 aa13.66□□□□□ -0.22
CPSF4-209ENST00000465132 SLA2Q9H6Q3 261 aa13.66□□□□□ -0.22
CPSF4-209ENST00000465132 NDUFA4L2Q9NRX3 87 aa13.66□□□□□ -0.22
CPSF4-209ENST00000465132 PRR13Q9NZ81 148 aa13.66□□□□□ -0.22
CPSF4-209ENST00000465132 TRAV3A0A0B4J244 114 aa13.65□□□□□ -0.22
CPSF4-209ENST00000465132 A0A0B4J293 547 aa13.65□□□□□ -0.22
CPSF4-209ENST00000465132 DBX1A6NMT0 343 aa13.65□□□□□ -0.22
CPSF4-209ENST00000465132 HIST1H1BP16401 226 aaKnown RBP13.65□□□□□ -0.22
CPSF4-209ENST00000465132 SUB1P53999 127 aaKnown RBP eCLIP13.65□□□□□ -0.22
CPSF4-209ENST00000465132 CYCSP99999 105 aaKnown RBP13.65□□□□□ -0.22
CPSF4-209ENST00000465132 CD83Q01151 205 aa13.65□□□□□ -0.22
CPSF4-209ENST00000465132 MRGPRG-AS1Q2M3A8 158 aa13.65□□□□□ -0.22
CPSF4-209ENST00000465132 CXorf66Q5JRM2 361 aaPredicted RBP13.65□□□□□ -0.22
CPSF4-209ENST00000465132 NOXA1Q86UR1 476 aa13.65□□□□□ -0.22
CPSF4-209ENST00000465132 OR5AU1Q8NGC0 362 aa13.65□□□□□ -0.22
CPSF4-209ENST00000465132 HIPK2Q9H2X6 1198 aa13.65□□□□□ -0.22
CPSF4-209ENST00000465132 THYN1Q9P016 225 aa13.65□□□□□ -0.22
CPSF4-209ENST00000465132 NSG2Q9Y328 171 aa13.65□□□□□ -0.22
CPSF4-209ENST00000465132 A0A1W2PRX2 142 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 C7orf66A4D0T2 115 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 C5orf51A6NDU8 294 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 NPIPB5A8MRT5 1133 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 INS-IGF2F8WCM5 200 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 ST8SIA3O43173 380 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 BRI3O95415 125 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 DEFA4P12838 97 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 IGLL1P15814 213 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 SPNP16150 400 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 CD33P20138 364 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 SNCAP37840 140 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 ATP5IP56385 69 aaPredicted RBP13.64□□□□□ -0.23
CPSF4-209ENST00000465132 FOXE3Q13461 319 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 TTC9CQ8N5M4 171 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 NOL4LQ96MY1 436 aaPredicted RBP13.64□□□□□ -0.23
CPSF4-209ENST00000465132 CIB3Q96Q77 187 aaPredicted RBP13.64□□□□□ -0.23
CPSF4-209ENST00000465132 FAM103A1Q9BTL3 118 aaKnown RBP13.64□□□□□ -0.23
CPSF4-209ENST00000465132 WSB1Q9Y6I7 421 aa13.64□□□□□ -0.23
CPSF4-209ENST00000465132 C13orf42A0A1B0GVH6 325 aa13.63□□□□□ -0.23
CPSF4-209ENST00000465132 LINC01548A6NM66 108 aa13.63□□□□□ -0.23
CPSF4-209ENST00000465132 CEBPZOSA8MTT3 80 aa13.63□□□□□ -0.23
CPSF4-209ENST00000465132 FAM25EA8MYX2 175 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms