RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 E7EUB6 86 aa6.58□□□□□ -1.36
APP-213ENST00000464867 ST8SIA3O43173 380 aa6.58□□□□□ -1.36
APP-213ENST00000464867 FCGR3BO75015 233 aa6.58□□□□□ -1.36
APP-213ENST00000464867 DCTN3O75935 186 aa6.58□□□□□ -1.36
APP-213ENST00000464867 KBTBD11O94819 623 aa6.58□□□□□ -1.36
APP-213ENST00000464867 NUDT3O95989 172 aa6.58□□□□□ -1.36
APP-213ENST00000464867 DUTP33316 252 aaKnown RBP6.58□□□□□ -1.36
APP-213ENST00000464867 MS4A2Q01362 244 aa6.58□□□□□ -1.36
APP-213ENST00000464867 CLINT1Q14677 625 aa6.58□□□□□ -1.36
APP-213ENST00000464867 USF2Q15853 346 aaPredicted RBP6.58□□□□□ -1.36
APP-213ENST00000464867 OR2G6Q5TZ20 316 aa6.58□□□□□ -1.36
APP-213ENST00000464867 FAM222AQ5U5X8 452 aa6.58□□□□□ -1.36
APP-213ENST00000464867 UBE2UQ5VVX9 321 aa6.58□□□□□ -1.36
APP-213ENST00000464867 OR10J5Q8NHC4 309 aa6.58□□□□□ -1.36
APP-213ENST00000464867 CANT1Q8WVQ1 401 aa6.58□□□□□ -1.36
APP-213ENST00000464867 ATP6V0BQ99437 205 aa6.58□□□□□ -1.36
APP-213ENST00000464867 TAGLN3Q9UI15 199 aa6.58□□□□□ -1.36
APP-213ENST00000464867 MRPS7Q9Y2R9 242 aaKnown RBP6.58□□□□□ -1.36
APP-213ENST00000464867 PRELID3BQ9Y3B1 194 aa6.58□□□□□ -1.36
APP-213ENST00000464867 IGHV3OR16-13A0A075B7E8 117 aa6.57□□□□□ -1.36
APP-213ENST00000464867 IGHV3-74A0A0B4J1X5 117 aa6.57□□□□□ -1.36
APP-213ENST00000464867 KNCNA6PVL3 124 aa6.57□□□□□ -1.36
APP-213ENST00000464867 NUPL2O15504 423 aaKnown RBP6.57□□□□□ -1.36
APP-213ENST00000464867 IGFBP3P17936 291 aaPredicted RBP6.57□□□□□ -1.36
APP-213ENST00000464867 GNRHRP30968 328 aa6.57□□□□□ -1.36
APP-213ENST00000464867 OR2B8PP59922 312 aa6.57□□□□□ -1.36
APP-213ENST00000464867 ERVFC1-1P60608 527 aa6.57□□□□□ -1.36
APP-213ENST00000464867 DAD1P61803 113 aa6.57□□□□□ -1.36
APP-213ENST00000464867 Q56UQ5 140 aa6.57□□□□□ -1.36
APP-213ENST00000464867 RPL22L1Q6P5R6 122 aaKnown RBP6.57□□□□□ -1.36
APP-213ENST00000464867 VKORC1L1Q8N0U8 176 aa6.57□□□□□ -1.36
APP-213ENST00000464867 TMEM167AQ8TBQ9 72 aa6.57□□□□□ -1.36
APP-213ENST00000464867 TRUB1Q8WWH5 349 aaKnown RBP6.57□□□□□ -1.36
APP-213ENST00000464867 ORAI1Q96D31 301 aa6.57□□□□□ -1.36
APP-213ENST00000464867 DGCR14Q96DF8 476 aaKnown RBP6.57□□□□□ -1.36
APP-213ENST00000464867 NEU1Q99519 415 aa6.57□□□□□ -1.36
APP-213ENST00000464867 Q9N2K0 584 aa6.57□□□□□ -1.36
APP-213ENST00000464867 C21orf62Q9NYP8 219 aa6.57□□□□□ -1.36
APP-213ENST00000464867 RFNGQ9Y644 331 aa6.57□□□□□ -1.36
APP-213ENST00000464867 A0A1W2PPQ1 181 aa6.56□□□□□ -1.36
APP-213ENST00000464867 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
APP-213ENST00000464867 AQP12BA6NM10 295 aa6.56□□□□□ -1.36
APP-213ENST00000464867 LINC00473A8K010 186 aa6.56□□□□□ -1.36
APP-213ENST00000464867 TRDCB7Z8K6 153 aa6.56□□□□□ -1.36
APP-213ENST00000464867 G3V2T6 193 aa6.56□□□□□ -1.36
APP-213ENST00000464867 RAB27BO00194 218 aa6.56□□□□□ -1.36
APP-213ENST00000464867 BET1O15155 118 aa6.56□□□□□ -1.36
APP-213ENST00000464867 UBBP0CG47 229 aa6.56□□□□□ -1.36
APP-213ENST00000464867 SRMP19623 302 aa6.56□□□□□ -1.36
APP-213ENST00000464867 FGF9P31371 208 aaPredicted RBP6.56□□□□□ -1.36
APP-213ENST00000464867 FUSP35637 526 aaKnown RBP eCLIP6.56□□□□□ -1.36
APP-213ENST00000464867 GTF2A1P52655 376 aaPredicted RBP6.56□□□□□ -1.36
APP-213ENST00000464867 KRTAP10-1P60331 282 aa6.56□□□□□ -1.36
APP-213ENST00000464867 RPL8P62917 257 aaKnown RBP6.56□□□□□ -1.36
APP-213ENST00000464867 SSX1Q16384 188 aa6.56□□□□□ -1.36
APP-213ENST00000464867 CCDC58Q4VC31 144 aa6.56□□□□□ -1.36
APP-213ENST00000464867 MEDAGQ5VYS4 303 aa6.56□□□□□ -1.36
APP-213ENST00000464867 TTC23Q5W5X9 447 aa6.56□□□□□ -1.36
APP-213ENST00000464867 SLC25A24Q6NUK1 477 aa6.56□□□□□ -1.36
APP-213ENST00000464867 AQP12AQ8IXF9 295 aa6.56□□□□□ -1.36
APP-213ENST00000464867 OR4A4PQ8NGN8 299 aa6.56□□□□□ -1.36
APP-213ENST00000464867 ZNF414Q96IQ9 312 aa6.56□□□□□ -1.36
APP-213ENST00000464867 GINS3Q9BRX5 216 aa6.56□□□□□ -1.36
APP-213ENST00000464867 TMEM59Q9BXS4 323 aa6.56□□□□□ -1.36
APP-213ENST00000464867 TMEM231Q9H6L2 316 aa6.56□□□□□ -1.36
APP-213ENST00000464867 C12orf4Q9NQ89 552 aa6.56□□□□□ -1.36
APP-213ENST00000464867 XCL2Q9UBD3 114 aa6.56□□□□□ -1.36
APP-213ENST00000464867 EXOGQ9Y2C4 368 aaKnown RBP6.56□□□□□ -1.36
APP-213ENST00000464867 LINC00588Q9Y4M8 146 aa6.56□□□□□ -1.36
APP-213ENST00000464867 IGHV3OR16-12A0A075B7B8 117 aa6.55□□□□□ -1.36
APP-213ENST00000464867 IGKV1-6A0A0C4DH72 117 aa6.55□□□□□ -1.36
APP-213ENST00000464867 CLEC2LP0C7M8 214 aa6.55□□□□□ -1.36
APP-213ENST00000464867 HLA-GP17693 338 aa6.55□□□□□ -1.36
APP-213ENST00000464867 HTR2CP28335 458 aa6.55□□□□□ -1.36
APP-213ENST00000464867 RNASE12Q5GAN4 147 aaKnown RBP6.55□□□□□ -1.36
APP-213ENST00000464867 CT83Q5H943 113 aa6.55□□□□□ -1.36
APP-213ENST00000464867 KCTD9Q7L273 389 aa6.55□□□□□ -1.36
APP-213ENST00000464867 SSX7Q7RTT5 188 aa6.55□□□□□ -1.36
APP-213ENST00000464867 FAM24BQ8N5W8 94 aa6.55□□□□□ -1.36
APP-213ENST00000464867 GGHQ92820 318 aa6.55□□□□□ -1.36
APP-213ENST00000464867 CCDC124Q96CT7 223 aaKnown RBP6.55□□□□□ -1.36
APP-213ENST00000464867 GRAMD2BQ96HH9 432 aa6.55□□□□□ -1.36
APP-213ENST00000464867 OR10C1Q96KK4 312 aa6.55□□□□□ -1.36
APP-213ENST00000464867 GPHA2Q96T91 129 aa6.55□□□□□ -1.36
APP-213ENST00000464867 UQCC2Q9BRT2 126 aa6.55□□□□□ -1.36
APP-213ENST00000464867 Q9H3A6 140 aa6.55□□□□□ -1.36
APP-213ENST00000464867 AK3Q9UIJ7 227 aa6.55□□□□□ -1.36
APP-213ENST00000464867 TRAV8-7A0A075B6U6 113 aa6.54□□□□□ -1.36
APP-213ENST00000464867 FKBP6O75344 327 aa6.54□□□□□ -1.36
APP-213ENST00000464867 HRASP01112 189 aa6.54□□□□□ -1.36
APP-213ENST00000464867 ZNF688P0C7X2 276 aa6.54□□□□□ -1.36
APP-213ENST00000464867 GCSHP23434 173 aa6.54□□□□□ -1.36
APP-213ENST00000464867 MRPS15P82914 257 aaKnown RBP6.54□□□□□ -1.36
APP-213ENST00000464867 Q499Y3 187 aa6.54□□□□□ -1.36
APP-213ENST00000464867 OR2B11Q5JQS5 317 aa6.54□□□□□ -1.36
APP-213ENST00000464867 KDM4DQ6B0I6 523 aa6.54□□□□□ -1.36
APP-213ENST00000464867 ZNF705AQ6ZN79 300 aaPredicted RBP6.54□□□□□ -1.36
APP-213ENST00000464867 LRRTM1Q86UE6 522 aa6.54□□□□□ -1.36
APP-213ENST00000464867 NKAIN3Q8N8D7 197 aa6.54□□□□□ -1.36
APP-213ENST00000464867 STXBP6Q8NFX7 210 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms