RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 AKIRIN2Q53H80 203 aa1.46□□□□□ -2.18
CLK1-208ENST00000464454 KRT222Q8N1A0 295 aa1.46□□□□□ -2.18
CLK1-208ENST00000464454 RPP25LQ8N5L8 163 aaKnown RBP1.46□□□□□ -2.18
CLK1-208ENST00000464454 OR51D1Q8NGF3 324 aa1.46□□□□□ -2.18
CLK1-208ENST00000464454 CHST6Q9GZX3 395 aa1.46□□□□□ -2.18
CLK1-208ENST00000464454 PAQR5Q9NXK6 330 aaPredicted RBP1.46□□□□□ -2.18
CLK1-208ENST00000464454 FUT9Q9Y231 359 aa1.46□□□□□ -2.18
CLK1-208ENST00000464454 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.45□□□□□ -2.18
CLK1-208ENST00000464454 NOS1APO75052 506 aaPredicted RBP1.45□□□□□ -2.18
CLK1-208ENST00000464454 TNNC2P02585 160 aa1.45□□□□□ -2.18
CLK1-208ENST00000464454 PRB1P04280 392 aa1.45□□□□□ -2.18
CLK1-208ENST00000464454 IFNA6P05013 189 aa1.45□□□□□ -2.18
CLK1-208ENST00000464454 ZNF705DP0CH99 300 aaPredicted RBP1.45□□□□□ -2.18
CLK1-208ENST00000464454 HIST1H1EP10412 219 aaKnown RBP1.45□□□□□ -2.18
CLK1-208ENST00000464454 DEFA4P12838 97 aa1.45□□□□□ -2.18
CLK1-208ENST00000464454 AP3S2P59780 193 aa1.45□□□□□ -2.18
CLK1-208ENST00000464454 LSM6P62312 80 aaKnown RBP1.45□□□□□ -2.18
CLK1-208ENST00000464454 TMEM155Q4W5P6 130 aa1.45□□□□□ -2.18
CLK1-208ENST00000464454 TMEM86AQ8N2M4 240 aa1.45□□□□□ -2.18
CLK1-208ENST00000464454 OR1M1Q8NGA1 313 aa1.45□□□□□ -2.18
CLK1-208ENST00000464454 CDC26Q8NHZ8 85 aa1.45□□□□□ -2.18
CLK1-208ENST00000464454 ACOT12Q8WYK0 555 aa1.45□□□□□ -2.18
CLK1-208ENST00000464454 SLC35B4Q969S0 331 aa1.45□□□□□ -2.18
CLK1-208ENST00000464454 OR51V1Q9H2C8 321 aa1.45□□□□□ -2.18
CLK1-208ENST00000464454 CST9LQ9H4G1 147 aa1.45□□□□□ -2.18
CLK1-208ENST00000464454 TIMM22Q9Y584 194 aa1.45□□□□□ -2.18
CLK1-208ENST00000464454 SCAF11Q99590 1463 aaKnown RBP1.44□□□□□ -2.18
CLK1-208ENST00000464454 A0A0D9SEW6 157 aa1.44□□□□□ -2.18
CLK1-208ENST00000464454 INMT-MINDY4F8WBC2 141 aa1.44□□□□□ -2.18
CLK1-208ENST00000464454 GOLGA6L19H0YKK7 550 aa1.44□□□□□ -2.18
CLK1-208ENST00000464454 KPNA3O00505 521 aaPredicted RBP1.44□□□□□ -2.18
CLK1-208ENST00000464454 OR5F1O95221 314 aa1.44□□□□□ -2.18
CLK1-208ENST00000464454 C1QAP02745 245 aa1.44□□□□□ -2.18
CLK1-208ENST00000464454 FGF6P10767 208 aa1.44□□□□□ -2.18
CLK1-208ENST00000464454 HLA-DMBP28068 263 aa1.44□□□□□ -2.18
CLK1-208ENST00000464454 OR2F1Q13607 317 aa1.44□□□□□ -2.18
CLK1-208ENST00000464454 PMAIP1Q13794 54 aa1.44□□□□□ -2.18
CLK1-208ENST00000464454 GRK1Q15835 563 aa1.44□□□□□ -2.18
CLK1-208ENST00000464454 HIST2H3PS2Q5TEC6 136 aa1.44□□□□□ -2.18
CLK1-208ENST00000464454 SLC36A1Q7Z2H8 476 aa1.44□□□□□ -2.18
CLK1-208ENST00000464454 C1orf158Q8N1D5 194 aa1.44□□□□□ -2.18
CLK1-208ENST00000464454 ZNF676Q8N7Q3 588 aa1.44□□□□□ -2.18
CLK1-208ENST00000464454 PRRC2BQ5JSZ5 2229 aaKnown RBP1.44□□□□□ -2.18
CLK1-208ENST00000464454 RALGAPA2Q2PPJ7 1873 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 A0A0J9YY10 115 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 A0A1B0GX78 115 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 GGT3PA6NGU5 568 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 EEF1E1-BLOC1S5C9J1V9 151 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 F8W036 122 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 ZNF737O75373 536 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 IGHV3-7P01780 117 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 TCRBP04435 133 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 SULT1A3P0DMM9 295 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 SULT1A4P0DMN0 295 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 GPX2P18283 190 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 HSD11B1P28845 292 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 MAGEA12P43365 314 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 CEBPGP53567 150 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 AQP4P55087 323 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 SPCS3P61009 180 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 RANP62826 216 aaKnown RBP1.43□□□□□ -2.18
CLK1-208ENST00000464454 BASP1P80723 227 aaKnown RBP1.43□□□□□ -2.18
CLK1-208ENST00000464454 FAM27BQ5VT28 67 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 FAM173BQ6P4H8 233 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 DEFB119Q8N690 84 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 IMP4Q96G21 291 aaKnown RBP1.43□□□□□ -2.18
CLK1-208ENST00000464454 ERMAPQ96PL5 475 aaPredicted RBP1.43□□□□□ -2.18
CLK1-208ENST00000464454 HSPB9Q9BQS6 159 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 NAA38Q9BRA0 125 aaKnown RBP1.43□□□□□ -2.18
CLK1-208ENST00000464454 OR8D2Q9GZM6 311 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 EFCAB1Q9HAE3 211 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 IL36BQ9NZH7 164 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 EIF3AQ14152 1382 aaKnown RBP1.43□□□□□ -2.18
CLK1-208ENST00000464454 MYH11P35749 1972 aa1.43□□□□□ -2.18
CLK1-208ENST00000464454 TTC21AQ8NDW8 1320 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 ZFYVE9O95405 1425 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 SDK1Q7Z5N4 2213 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 TRBV20OR9-2A0A075B6H5 130 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 IRGMA1A4Y4 181 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 IGKV2-29A2NJV5 120 aaPredicted RBP1.42□□□□□ -2.18
CLK1-208ENST00000464454 MEIS3P1A6NDR6 274 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 OR51F1A6NGY5 319 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 SLC22A1O15245 554 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 CIAO1O76071 339 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 TRGC1P0CF51 173 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 ZNF705BP0CI00 300 aaPredicted RBP1.42□□□□□ -2.18
CLK1-208ENST00000464454 CD79AP11912 226 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 NFYAP23511 347 aaPredicted RBP1.42□□□□□ -2.18
CLK1-208ENST00000464454 AKR1C3P42330 323 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 EVX1P49640 407 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 SULT1A1P50225 295 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 VBP1P61758 197 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 IFITM2Q01629 132 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 RPL18Q07020 188 aaKnown RBP1.42□□□□□ -2.18
CLK1-208ENST00000464454 STX5Q13190 355 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 NDUFA5Q16718 116 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 GUK1Q16774 197 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 SPOPLQ6IQ16 392 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 ALKAL1Q6UXT8 129 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 Q6ZS49 121 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms