RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 HPRT1P00492 218 aa12.72□□□□□ -0.37
HMGN1-210ENST00000464078 AQP4P55087 323 aa12.72□□□□□ -0.37
HMGN1-210ENST00000464078 CATR1Q13166 79 aa12.72□□□□□ -0.37
HMGN1-210ENST00000464078 SECTM1Q8WVN6 248 aa12.72□□□□□ -0.37
HMGN1-210ENST00000464078 CCL28Q9NRJ3 127 aa12.72□□□□□ -0.37
HMGN1-210ENST00000464078 C15orf62A8K5M9 175 aa12.71□□□□□ -0.37
HMGN1-210ENST00000464078 NOTOA8MTQ0 251 aa12.71□□□□□ -0.37
HMGN1-210ENST00000464078 SERPINE2P07093 398 aa12.71□□□□□ -0.37
HMGN1-210ENST00000464078 TCTAP57738 103 aa12.71□□□□□ -0.37
HMGN1-210ENST00000464078 WT1-ASQ06250 92 aa12.71□□□□□ -0.37
HMGN1-210ENST00000464078 ZNF773Q6PK81 442 aa12.71□□□□□ -0.37
HMGN1-210ENST00000464078 OR10W1Q8NGF6 305 aa12.71□□□□□ -0.37
HMGN1-210ENST00000464078 CD300LFQ8TDQ1 290 aa12.71□□□□□ -0.37
HMGN1-210ENST00000464078 CHRDL1Q9BU40 450 aa12.71□□□□□ -0.37
HMGN1-210ENST00000464078 PLEKHA2Q9HB19 425 aa12.71□□□□□ -0.37
HMGN1-210ENST00000464078 TMEM140Q9NV12 185 aa12.71□□□□□ -0.37
HMGN1-210ENST00000464078 COMMD9Q9P000 198 aa12.71□□□□□ -0.37
HMGN1-210ENST00000464078 MPTX1A8MV57 137 aa12.7□□□□□ -0.38
HMGN1-210ENST00000464078 F8W735 103 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-210ENST00000464078 SULT1C2O00338 296 aa12.7□□□□□ -0.38
HMGN1-210ENST00000464078 PPYP01298 95 aa12.7□□□□□ -0.38
HMGN1-210ENST00000464078 CTSDP07339 412 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-210ENST00000464078 RPA2P15927 270 aa12.7□□□□□ -0.38
HMGN1-210ENST00000464078 FCGR2CP31995 323 aa12.7□□□□□ -0.38
HMGN1-210ENST00000464078 ADMP35318 185 aa12.7□□□□□ -0.38
HMGN1-210ENST00000464078 ARPC4P59998 168 aa12.7□□□□□ -0.38
HMGN1-210ENST00000464078 C22orf42Q6IC83 251 aa12.7□□□□□ -0.38
HMGN1-210ENST00000464078 BEST4Q8NFU0 473 aa12.7□□□□□ -0.38
HMGN1-210ENST00000464078 OR5B3Q8NH48 314 aa12.7□□□□□ -0.38
HMGN1-210ENST00000464078 CSTL1Q9H114 145 aa12.7□□□□□ -0.38
HMGN1-210ENST00000464078 C21orf62Q9NYP8 219 aa12.7□□□□□ -0.38
HMGN1-210ENST00000464078 TRAPPC2P0DI81 140 aa12.69□□□□□ -0.38
HMGN1-210ENST00000464078 TRAPPC2BP0DI82 140 aa12.69□□□□□ -0.38
HMGN1-210ENST00000464078 OR13C7P0DN81 318 aa12.69□□□□□ -0.38
HMGN1-210ENST00000464078 CMC4P56277 68 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-210ENST00000464078 PRR20EP86478 221 aa12.69□□□□□ -0.38
HMGN1-210ENST00000464078 PRR20CP86479 221 aa12.69□□□□□ -0.38
HMGN1-210ENST00000464078 PRR20DP86480 221 aa12.69□□□□□ -0.38
HMGN1-210ENST00000464078 PRR20BP86481 221 aa12.69□□□□□ -0.38
HMGN1-210ENST00000464078 PRR20AP86496 221 aa12.69□□□□□ -0.38
HMGN1-210ENST00000464078 RBMS2Q15434 407 aaKnown RBP12.69□□□□□ -0.38
HMGN1-210ENST00000464078 APRG1Q8IVJ8 170 aa12.69□□□□□ -0.38
HMGN1-210ENST00000464078 C11orf45Q8TAV5 145 aa12.69□□□□□ -0.38
HMGN1-210ENST00000464078 RARRES2Q99969 163 aa12.69□□□□□ -0.38
HMGN1-210ENST00000464078 C20orf24Q9BUV8 137 aa12.69□□□□□ -0.38
HMGN1-210ENST00000464078 SMPXQ9UHP9 88 aa12.69□□□□□ -0.38
HMGN1-210ENST00000464078 ETV7Q9Y603 341 aa12.69□□□□□ -0.38
HMGN1-210ENST00000464078 F11RQ9Y624 299 aaKnown RBP12.69□□□□□ -0.38
HMGN1-210ENST00000464078 IFNA4P05014 189 aa12.68□□□□□ -0.38
HMGN1-210ENST00000464078 FGF9P31371 208 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-210ENST00000464078 MFAP2P55001 183 aa12.68□□□□□ -0.38
HMGN1-210ENST00000464078 NANOS2P60321 138 aaKnown RBP12.68□□□□□ -0.38
HMGN1-210ENST00000464078 CADM3Q8N126 398 aa12.68□□□□□ -0.38
HMGN1-210ENST00000464078 DMBX1Q8NFW5 382 aa12.68□□□□□ -0.38
HMGN1-210ENST00000464078 OR1L8Q8NGR8 309 aa12.68□□□□□ -0.38
HMGN1-210ENST00000464078 LGALS14Q8TCE9 139 aa12.68□□□□□ -0.38
HMGN1-210ENST00000464078 SCARB1Q8WTV0 552 aa12.68□□□□□ -0.38
HMGN1-210ENST00000464078 LSM10Q969L4 123 aaKnown RBP12.68□□□□□ -0.38
HMGN1-210ENST00000464078 ZNF414Q96IQ9 312 aa12.68□□□□□ -0.38
HMGN1-210ENST00000464078 SLC5A7Q9GZV3 580 aa12.68□□□□□ -0.38
HMGN1-210ENST00000464078 RHBDL2Q9NX52 303 aa12.68□□□□□ -0.38
HMGN1-210ENST00000464078 TEX50A0A1B0GTY4 177 aa12.67□□□□□ -0.38
HMGN1-210ENST00000464078 SMIM30A4D0T7 59 aa12.67□□□□□ -0.38
HMGN1-210ENST00000464078 K7EIM0 57 aa12.67□□□□□ -0.38
HMGN1-210ENST00000464078 SLC25A24Q6NUK1 477 aa12.67□□□□□ -0.38
HMGN1-210ENST00000464078 ZNF818PQ6ZRF7 136 aa12.67□□□□□ -0.38
HMGN1-210ENST00000464078 HOGA1Q86XE5 327 aa12.67□□□□□ -0.38
HMGN1-210ENST00000464078 C2CD4CQ8TF44 421 aa12.67□□□□□ -0.38
HMGN1-210ENST00000464078 NRG4Q8WWG1 115 aa12.67□□□□□ -0.38
HMGN1-210ENST00000464078 RNF2Q99496 336 aa12.67□□□□□ -0.38
HMGN1-210ENST00000464078 NDUFA4L2Q9NRX3 87 aa12.67□□□□□ -0.38
HMGN1-210ENST00000464078 BLOC1S6Q9UL45 172 aa12.67□□□□□ -0.38
HMGN1-210ENST00000464078 IGHV3OR16-8A0A075B7F1 116 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 IGHV7-4-1A0A0J9YVY3 117 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 MARCH11A6NNE9 402 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 CTSGP08311 255 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 PTHLHP12272 177 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 SCAND1P57086 179 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 ZNF124Q15973 351 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 TPRA1Q86W33 373 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 OR11H2Q8NH07 326 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 OR51H1Q8NH63 302 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 BORCS5Q969J3 196 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 OR10C1Q96KK4 312 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 RHPN1-AS1Q9BWJ2 59 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 FBXL17Q9UF56 701 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 DAPK2Q9UIK4 370 aa12.66□□□□□ -0.38
HMGN1-210ENST00000464078 CHEK1O14757 476 aa12.65□□□□□ -0.38
HMGN1-210ENST00000464078 ZNF207O43670 478 aaKnown RBP12.65□□□□□ -0.38
HMGN1-210ENST00000464078 ERVK-16P61578 105 aa12.65□□□□□ -0.38
HMGN1-210ENST00000464078 RELQ04864 619 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-210ENST00000464078 AADACL3Q5VUY0 350 aa12.65□□□□□ -0.38
HMGN1-210ENST00000464078 SFXN4Q6P4A7 337 aa12.65□□□□□ -0.38
HMGN1-210ENST00000464078 GVQW1Q8N7I0 195 aa12.65□□□□□ -0.38
HMGN1-210ENST00000464078 GIMAP1Q8WWP7 306 aa12.65□□□□□ -0.38
HMGN1-210ENST00000464078 TXNL4BQ9NX01 149 aaKnown RBP12.65□□□□□ -0.38
HMGN1-210ENST00000464078 A0A0A6YYH2 397 aa12.64□□□□□ -0.39
HMGN1-210ENST00000464078 A6NJ64 397 aa12.64□□□□□ -0.39
HMGN1-210ENST00000464078 FXYD4P59646 89 aa12.64□□□□□ -0.39
HMGN1-210ENST00000464078 Q56UQ5 140 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 376.5 ms