RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 COMMD9Q9P000 198 aa14.2□□□□□ -0.14
SF3A1-205ENST00000463818 TMEM213A2RRL7 107 aa14.19□□□□□ -0.14
SF3A1-205ENST00000463818 OR11H12B2RN74 326 aa14.19□□□□□ -0.14
SF3A1-205ENST00000463818 RLN1P04808 185 aa14.19□□□□□ -0.14
SF3A1-205ENST00000463818 FGF2P09038 288 aa14.19□□□□□ -0.14
SF3A1-205ENST00000463818 TRAPPC2P0DI81 140 aa14.19□□□□□ -0.14
SF3A1-205ENST00000463818 TRAPPC2BP0DI82 140 aa14.19□□□□□ -0.14
SF3A1-205ENST00000463818 ZNF182P17025 639 aaPredicted RBP14.19□□□□□ -0.14
SF3A1-205ENST00000463818 F2RP25116 425 aa14.19□□□□□ -0.14
SF3A1-205ENST00000463818 TAS2R46P59540 309 aa14.19□□□□□ -0.14
SF3A1-205ENST00000463818 ERVK-16P61578 105 aa14.19□□□□□ -0.14
SF3A1-205ENST00000463818 CLVS1Q8IUQ0 354 aaPredicted RBP14.19□□□□□ -0.14
SF3A1-205ENST00000463818 UXS1Q8NBZ7 420 aa14.19□□□□□ -0.14
SF3A1-205ENST00000463818 OR6F1Q8NGZ6 308 aa14.19□□□□□ -0.14
SF3A1-205ENST00000463818 ZNF502Q8TBZ5 544 aa14.19□□□□□ -0.14
SF3A1-205ENST00000463818 COMMD3Q9UBI1 195 aa14.19□□□□□ -0.14
SF3A1-205ENST00000463818 TENM2Q9NT68 2774 aa14.19□□□□□ -0.14
SF3A1-205ENST00000463818 RBMY1BA6NDE4 496 aaKnown RBP14.18□□□□□ -0.14
SF3A1-205ENST00000463818 RBMY1EA6NEQ0 496 aaKnown RBP14.18□□□□□ -0.14
SF3A1-205ENST00000463818 EIF4EP06730 217 aaKnown RBP14.18□□□□□ -0.14
SF3A1-205ENST00000463818 RBMY1DP0C7P1 496 aaKnown RBP14.18□□□□□ -0.14
SF3A1-205ENST00000463818 OR13C7P0DN81 318 aa14.18□□□□□ -0.14
SF3A1-205ENST00000463818 PTBP1P26599 531 aaKnown RBP eCLIP14.18□□□□□ -0.14
SF3A1-205ENST00000463818 HLA-DMAP28067 261 aa14.18□□□□□ -0.14
SF3A1-205ENST00000463818 SPCS2Q15005 226 aa14.18□□□□□ -0.14
SF3A1-205ENST00000463818 TM4SF20Q53R12 229 aa14.18□□□□□ -0.14
SF3A1-205ENST00000463818 ZNF57Q68EA5 555 aaPredicted RBP14.18□□□□□ -0.14
SF3A1-205ENST00000463818 CMTM1Q8IZ96 169 aa14.18□□□□□ -0.14
SF3A1-205ENST00000463818 FCAMRQ8WWV6 532 aa14.18□□□□□ -0.14
SF3A1-205ENST00000463818 DGCR14Q96DF8 476 aaKnown RBP14.18□□□□□ -0.14
SF3A1-205ENST00000463818 WFDC10AQ9H1F0 79 aa14.18□□□□□ -0.14
SF3A1-205ENST00000463818 HIPK2Q9H2X6 1198 aa14.18□□□□□ -0.14
SF3A1-205ENST00000463818 SRD5A3Q9H8P0 318 aa14.18□□□□□ -0.14
SF3A1-205ENST00000463818 RETNQ9HD89 108 aa14.18□□□□□ -0.14
SF3A1-205ENST00000463818 THYN1Q9P016 225 aa14.18□□□□□ -0.14
SF3A1-205ENST00000463818 MLXQ9UH92 298 aa14.18□□□□□ -0.14
SF3A1-205ENST00000463818 DYNC2H1Q8NCM8 4307 aaKnown RBP14.18□□□□□ -0.14
SF3A1-205ENST00000463818 MARCH11A6NNE9 402 aa14.17□□□□□ -0.14
SF3A1-205ENST00000463818 A8MWP6 167 aa14.17□□□□□ -0.14
SF3A1-205ENST00000463818 GPR31O00270 319 aa14.17□□□□□ -0.14
SF3A1-205ENST00000463818 KRASP01116 189 aa14.17□□□□□ -0.14
SF3A1-205ENST00000463818 GPR183P32249 361 aa14.17□□□□□ -0.14
SF3A1-205ENST00000463818 HRH1P35367 487 aa14.17□□□□□ -0.14
SF3A1-205ENST00000463818 ZNF585BQ52M93 769 aa14.17□□□□□ -0.14
SF3A1-205ENST00000463818 THOC7Q6I9Y2 204 aaKnown RBP14.17□□□□□ -0.14
SF3A1-205ENST00000463818 SLC25A24Q6NUK1 477 aa14.17□□□□□ -0.14
SF3A1-205ENST00000463818 UNQ9165/PRO28630Q6UXU0 137 aa14.17□□□□□ -0.14
SF3A1-205ENST00000463818 OR1L8Q8NGR8 309 aa14.17□□□□□ -0.14
SF3A1-205ENST00000463818 DYNC2LI1Q8TCX1 351 aa14.17□□□□□ -0.14
SF3A1-205ENST00000463818 GPX8Q8TED1 209 aa14.17□□□□□ -0.14
SF3A1-205ENST00000463818 GAR1Q9NY12 217 aaKnown RBP14.17□□□□□ -0.14
SF3A1-205ENST00000463818 CCDC59Q9P031 241 aaKnown RBP14.17□□□□□ -0.14
SF3A1-205ENST00000463818 NSG2Q9Y328 171 aa14.17□□□□□ -0.14
SF3A1-205ENST00000463818 IGHV3-35A0A0C4DH35 117 aa14.16□□□□□ -0.14
SF3A1-205ENST00000463818 SMIM31A0A1B0GVY4 71 aa14.16□□□□□ -0.14
SF3A1-205ENST00000463818 SERPINE2P07093 398 aa14.16□□□□□ -0.14
SF3A1-205ENST00000463818 WT1-ASQ06250 92 aa14.16□□□□□ -0.14
SF3A1-205ENST00000463818 PLET1Q6UQ28 207 aa14.16□□□□□ -0.14
SF3A1-205ENST00000463818 TMEM61Q8N0U2 210 aa14.16□□□□□ -0.14
SF3A1-205ENST00000463818 GDPD1Q8N9F7 314 aa14.16□□□□□ -0.14
SF3A1-205ENST00000463818 VN1R17PQ8TDU5 208 aa14.16□□□□□ -0.14
SF3A1-205ENST00000463818 HINT2Q9BX68 163 aa14.16□□□□□ -0.14
SF3A1-205ENST00000463818 FXYD6Q9H0Q3 95 aa14.16□□□□□ -0.14
SF3A1-205ENST00000463818 RBM38Q9H0Z9 239 aaKnown RBP14.16□□□□□ -0.14
SF3A1-205ENST00000463818 NDUFA4L2Q9NRX3 87 aa14.16□□□□□ -0.14
SF3A1-205ENST00000463818 OR51B2Q9Y5P1 312 aa14.16□□□□□ -0.14
SF3A1-205ENST00000463818 H3BMQ9 156 aa14.15□□□□□ -0.14
SF3A1-205ENST00000463818 CYB5BO43169 146 aa14.15□□□□□ -0.14
SF3A1-205ENST00000463818 SNAPC5O75971 98 aa14.15□□□□□ -0.14
SF3A1-205ENST00000463818 C8orf88P0DMB2 117 aa14.15□□□□□ -0.14
SF3A1-205ENST00000463818 G6PCP35575 357 aa14.15□□□□□ -0.14
SF3A1-205ENST00000463818 TSPAN5P62079 268 aa14.15□□□□□ -0.14
SF3A1-205ENST00000463818 MZT2AQ6P582 158 aa14.15□□□□□ -0.14
SF3A1-205ENST00000463818 SLC16A13Q7RTY0 426 aa14.15□□□□□ -0.14
SF3A1-205ENST00000463818 HSD17B13Q7Z5P4 300 aaPredicted RBP14.15□□□□□ -0.14
SF3A1-205ENST00000463818 CADM3Q8N126 398 aa14.15□□□□□ -0.14
SF3A1-205ENST00000463818 FAM110AQ9BQ89 295 aa14.15□□□□□ -0.14
SF3A1-205ENST00000463818 RYR2Q92736 4967 aa14.15□□□□□ -0.14
SF3A1-205ENST00000463818 TGOLN2O43493 480 aa14.14□□□□□ -0.15
SF3A1-205ENST00000463818 SCAF4O95104 1147 aaKnown RBP14.14□□□□□ -0.15
SF3A1-205ENST00000463818 ELK1P19419 428 aa14.14□□□□□ -0.15
SF3A1-205ENST00000463818 MFAP2P55001 183 aa14.14□□□□□ -0.15
SF3A1-205ENST00000463818 PHLDA2Q53GA4 152 aa14.14□□□□□ -0.15
SF3A1-205ENST00000463818 BTNL8Q6UX41 500 aa14.14□□□□□ -0.15
SF3A1-205ENST00000463818 SNX29P2Q8IUI4 249 aa14.14□□□□□ -0.15
SF3A1-205ENST00000463818 MARC2Q969Z3 335 aa14.14□□□□□ -0.15
SF3A1-205ENST00000463818 MRPL27Q9P0M9 148 aaKnown RBP14.14□□□□□ -0.15
SF3A1-205ENST00000463818 UFC1Q9Y3C8 167 aa14.14□□□□□ -0.15
SF3A1-205ENST00000463818 IGHV3-21A0A0B4J1V1 117 aa14.13□□□□□ -0.15
SF3A1-205ENST00000463818 ZNF701M0R085 212 aaPredicted RBP14.13□□□□□ -0.15
SF3A1-205ENST00000463818 HPGDSO60760 199 aa14.13□□□□□ -0.15
SF3A1-205ENST00000463818 ELLP55199 621 aaPredicted RBP14.13□□□□□ -0.15
SF3A1-205ENST00000463818 LPCAT3Q6P1A2 487 aa14.13□□□□□ -0.15
SF3A1-205ENST00000463818 OR52B4Q8NGK2 314 aa14.13□□□□□ -0.15
SF3A1-205ENST00000463818 LSM10Q969L4 123 aaKnown RBP14.13□□□□□ -0.15
SF3A1-205ENST00000463818 ZNF436Q9C0F3 470 aaPredicted RBP14.13□□□□□ -0.15
SF3A1-205ENST00000463818 SCPEP1Q9HB40 452 aa14.13□□□□□ -0.15
SF3A1-205ENST00000463818 F11RQ9Y624 299 aaKnown RBP14.13□□□□□ -0.15
SF3A1-205ENST00000463818 STARD9Q9P2P6 4700 aa14.13□□□□□ -0.15
SF3A1-205ENST00000463818 TRAV25A0A0B4J276 109 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms