RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 TRGV3P03979 118 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 PAQR4Q8N4S7 273 aaPredicted RBP11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 NABP1Q96AH0 204 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 DUX5Q96PT3 197 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 RPRMQ9NS64 109 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 STAG3L2P0CL84 134 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 FAM201AQ5SY85 155 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 PEAR1Q5VY43 1037 aaPredicted RBP11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 PPP1R27Q86WC6 154 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 OR4B1Q8NGF8 309 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 PLSCR4Q9NRQ2 329 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 RNF222A6NCQ9 220 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 LCN2P80188 198 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 TCF24Q7RTU0 167 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 CENPVQ7Z7K6 275 aaPredicted RBP11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 SPACA3Q8IXA5 215 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 HSPB9Q9BQS6 159 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 TRAV14DV4A0A0A6YYC5 116 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 FBLL1A6NHQ2 334 aaKnown RBP11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 UPK2O00526 184 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 GPX1P07203 203 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 SAMD13Q5VXD3 122 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 CENPWQ5EE01 88 aa11.28□□□□□ -0.6
CHRNA4-202ENST00000463705 RPLP1P05386 114 aaKnown RBP11.27□□□□□ -0.6
CHRNA4-202ENST00000463705 GOLT1AQ6ZVE7 132 aa11.27□□□□□ -0.6
CHRNA4-202ENST00000463705 ZNF525Q8N782 197 aa11.27□□□□□ -0.6
CHRNA4-202ENST00000463705 TNFRSF14Q92956 283 aa11.27□□□□□ -0.6
CHRNA4-202ENST00000463705 TRAV24A0A0B4J272 114 aa11.27□□□□□ -0.61
CHRNA4-202ENST00000463705 C5orf52A6NGY3 159 aa11.27□□□□□ -0.61
CHRNA4-202ENST00000463705 C21orf62Q9NYP8 219 aa11.27□□□□□ -0.61
CHRNA4-202ENST00000463705 FBXL7Q9UJT9 491 aa11.27□□□□□ -0.61
CHRNA4-202ENST00000463705 AUP1Q9Y679 476 aa11.27□□□□□ -0.61
CHRNA4-202ENST00000463705 SAA2-SAA4A0A096LPE2 208 aa11.27□□□□□ -0.61
CHRNA4-202ENST00000463705 CBY3A6NI87 242 aa11.27□□□□□ -0.61
CHRNA4-202ENST00000463705 SAA2P0DJI9 122 aaPredicted RBP11.27□□□□□ -0.61
CHRNA4-202ENST00000463705 WDR25Q64LD2 544 aaPredicted RBP11.27□□□□□ -0.61
CHRNA4-202ENST00000463705 IGFBP2P18065 325 aa11.27□□□□□ -0.61
CHRNA4-202ENST00000463705 MORN2Q502X0 79 aa11.27□□□□□ -0.61
CHRNA4-202ENST00000463705 FMC1Q96HJ9 113 aa11.27□□□□□ -0.61
CHRNA4-202ENST00000463705 RAXQ9Y2V3 346 aa11.27□□□□□ -0.61
CHRNA4-202ENST00000463705 PAM16Q9Y3D7 125 aa11.27□□□□□ -0.61
CHRNA4-202ENST00000463705 C15orf61A6NNL5 157 aa11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 UBE2L6O14933 153 aa11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 TFF3Q07654 80 aa11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 TMEM133Q9H2Q1 129 aa11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 TRAV9-1A0A075B6T8 112 aa11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 RRHO14718 337 aa11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 BTF3P20290 206 aaKnown RBP11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 TEX45Q8NA69 505 aa11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 ICE1Q9Y2F5 2266 aa11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 SOX21Q9Y651 276 aaPredicted RBP11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 RALGAPA1Q6GYQ0 2036 aa11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 ZNF98A6NK75 572 aa11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 LEPROTL1O95214 131 aa11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 NBEAP1P0C6P0 100 aa11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 HBBP68871 147 aa11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 ZNF324BQ6AW86 544 aaPredicted RBP11.26□□□□□ -0.61
CHRNA4-202ENST00000463705 CGB1A6NKQ9 187 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 NBR2O15453 112 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 SAA1P0DJI8 122 aaPredicted RBP11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 FGFBP3Q8TAT2 258 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 GPR82Q96P67 336 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 KLHDC3Q9BQ90 382 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 CEP250Q9BV73 2442 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 FNDC1Q4ZHG4 1894 aaPredicted RBP11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 TMEM238LA0A1B0GVL6 79 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 A6NJY4 79 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 M0R3E3 92 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 THBDP07204 575 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 CNOT1A5YKK6 2376 aaKnown RBP11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 C19orf54Q5BKX5 351 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 TMEM144Q7Z5S9 345 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 TMEM190Q8WZ59 177 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 A0A0A6YYD4 124 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 FAM209BQ5JX69 171 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 MDS2Q8NDY4 140 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 OR10AG1Q8NH19 301 aa11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 EP300Q09472 2414 aaPredicted RBP11.25□□□□□ -0.61
CHRNA4-202ENST00000463705 IGHV3OR16-10A0A075B7F0 116 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 A0A1B0GW15 77 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 NUDT3O95989 172 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 LY6G6FQ5SQ64 297 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 AMMECR1LQ6DCA0 310 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 LRTM2Q8N967 370 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 OR1N2Q8NGR9 330 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 ZMAT5Q9UDW3 170 aaKnown RBP11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 IGKV1D-13A0A0B4J2D9 117 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 PEX7O00628 323 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 IGKV1-13P0DP09 117 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 TBR1Q16650 682 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 HLA-DRB1P01911 266 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 SRP19P09132 144 aaKnown RBP11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 SRIP30626 198 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 BMPERQ8N8U9 685 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 RNF126Q9BV68 326 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 FOXA2Q9Y261 457 aaPredicted RBP11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 A0A087WWC5 75 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 OR4C46A6NHA9 309 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms