RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 TNCP24821 2201 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 STARD9Q9P2P6 4700 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 CGB1A6NKQ9 187 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 UBE2CO00762 179 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 SPRY2O43597 315 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 FCER2P06734 321 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 OR13C7P0DN81 318 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 PTHLHP12272 177 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 SPSB3Q6PJ21 355 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 Q6ZWC4 215 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 TMEM217Q8N7C4 229 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 STPG3Q8N7X2 389 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 OR5AP2Q8NGF4 316 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 OR1L8Q8NGR8 309 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 BSCL2Q96G97 398 aaPredicted RBP11.49□□□□□ -0.57
SKA3-204ENST00000462482 HINT2Q9BX68 163 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 YTHDF1Q9BYJ9 559 aaKnown RBP11.49□□□□□ -0.57
SKA3-204ENST00000462482 ZNF436Q9C0F3 470 aaPredicted RBP11.49□□□□□ -0.57
SKA3-204ENST00000462482 AUNIPQ9H7T9 357 aa11.49□□□□□ -0.57
SKA3-204ENST00000462482 DAZ1Q9NQZ3 744 aaKnown RBP11.49□□□□□ -0.57
SKA3-204ENST00000462482 EPPK1P58107 5090 aaKnown RBP11.49□□□□□ -0.57
SKA3-204ENST00000462482 TRAV3A0A0B4J244 114 aa11.48□□□□□ -0.57
SKA3-204ENST00000462482 LOC100506127A0A0U1RQW1 187 aa11.48□□□□□ -0.57
SKA3-204ENST00000462482 OR2T8A6NH00 312 aa11.48□□□□□ -0.57
SKA3-204ENST00000462482 OR4C46A6NHA9 309 aa11.48□□□□□ -0.57
SKA3-204ENST00000462482 SNAPC5O75971 98 aa11.48□□□□□ -0.57
SKA3-204ENST00000462482 S1PR2O95136 353 aa11.48□□□□□ -0.57
SKA3-204ENST00000462482 LY6G6CO95867 125 aa11.48□□□□□ -0.57
SKA3-204ENST00000462482 ZNF818PQ6ZRF7 136 aa11.48□□□□□ -0.57
SKA3-204ENST00000462482 OR5H6Q8NGV6 325 aa11.48□□□□□ -0.57
SKA3-204ENST00000462482 TMEM190Q8WZ59 177 aa11.48□□□□□ -0.57
SKA3-204ENST00000462482 SLC25A38Q96DW6 304 aa11.48□□□□□ -0.57
SKA3-204ENST00000462482 C20orf24Q9BUV8 137 aa11.48□□□□□ -0.57
SKA3-204ENST00000462482 C6orf62Q9GZU0 229 aaPredicted RBP11.48□□□□□ -0.57
SKA3-204ENST00000462482 KLK5Q9Y337 293 aaPredicted RBP11.48□□□□□ -0.57
SKA3-204ENST00000462482 CSMD3Q7Z407 3707 aa11.48□□□□□ -0.57
SKA3-204ENST00000462482 BIRC6Q9NR09 4857 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 A0A0J9YWU9 116 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 NDUFA4O00483 81 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 TSPAN4O14817 238 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 TMEM127O75204 238 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 SERPINE2P07093 398 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 CLEC2LP0C7M8 214 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 RPA2P15927 270 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 WFDC3Q8IUB2 231 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 CMTM1Q8IZ96 169 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 OR10W1Q8NGF6 305 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 LINC00476Q8WZB0 136 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 LSM10Q969L4 123 aaKnown RBP11.47□□□□□ -0.57
SKA3-204ENST00000462482 ATP6V0BQ99437 205 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 C21orf62Q9NYP8 219 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 EHFQ9NZC4 300 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 UBQLN2Q9UHD9 624 aa11.47□□□□□ -0.57
SKA3-204ENST00000462482 LYSTQ99698 3801 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 KIR2DL5BA0A0G2JN68 375 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 KIR2DL5BA0A0G2JPC4 375 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 TEX50A0A1B0GTY4 177 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 MARCH11A6NNE9 402 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 F2RP25116 425 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 S100GP29377 79 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 TNFRSF9Q07011 255 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 DEFB135Q30KP9 77 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 Q56UQ5 140 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 LYG2Q86SG7 212 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 KIR2DL5AQ8N109 375 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 UBAC2Q8NBM4 344 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 KIR2DL5BQ8NHK3 375 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 S100A16Q96FQ6 103 aaKnown RBP11.46□□□□□ -0.57
SKA3-204ENST00000462482 TMEM56Q96MV1 263 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 FKBP11Q9NYL4 201 aa11.46□□□□□ -0.57
SKA3-204ENST00000462482 KRASP01116 189 aa11.45□□□□□ -0.58
SKA3-204ENST00000462482 RLN1P04808 185 aa11.45□□□□□ -0.58
SKA3-204ENST00000462482 LPAR6P43657 344 aa11.45□□□□□ -0.58
SKA3-204ENST00000462482 CMC4P56277 68 aaPredicted RBP11.45□□□□□ -0.58
SKA3-204ENST00000462482 ZNF773Q6PK81 442 aa11.45□□□□□ -0.58
SKA3-204ENST00000462482 CEMP1Q6PRD7 247 aaPredicted RBP11.45□□□□□ -0.58
SKA3-204ENST00000462482 CROCCP3Q8IVE0 287 aa11.45□□□□□ -0.58
SKA3-204ENST00000462482 TSC22D3Q99576 134 aa11.45□□□□□ -0.58
SKA3-204ENST00000462482 PRNDQ9UKY0 176 aa11.45□□□□□ -0.58
SKA3-204ENST00000462482 OR51B2Q9Y5P1 312 aa11.45□□□□□ -0.58
SKA3-204ENST00000462482 F11RQ9Y624 299 aaKnown RBP11.45□□□□□ -0.58
SKA3-204ENST00000462482 IGHV3-21A0A0B4J1V1 117 aa11.44□□□□□ -0.58
SKA3-204ENST00000462482 MEIS3P1A6NDR6 274 aa11.44□□□□□ -0.58
SKA3-204ENST00000462482 K7EMT4 169 aa11.44□□□□□ -0.58
SKA3-204ENST00000462482 XRCC3O43542 346 aa11.44□□□□□ -0.58
SKA3-204ENST00000462482 PGLYRP1O75594 196 aaPredicted RBP11.44□□□□□ -0.58
SKA3-204ENST00000462482 GNRHRP30968 328 aa11.44□□□□□ -0.58
SKA3-204ENST00000462482 TAS2R46P59540 309 aa11.44□□□□□ -0.58
SKA3-204ENST00000462482 RELQ04864 619 aaPredicted RBP11.44□□□□□ -0.58
SKA3-204ENST00000462482 WT1-ASQ06250 92 aa11.44□□□□□ -0.58
SKA3-204ENST00000462482 OR5H2Q8NGV7 314 aa11.44□□□□□ -0.58
SKA3-204ENST00000462482 DGCR14Q96DF8 476 aaKnown RBP11.44□□□□□ -0.58
SKA3-204ENST00000462482 GALNT14Q96FL9 552 aa11.44□□□□□ -0.58
SKA3-204ENST00000462482 ZNF2Q9BSG1 426 aaPredicted RBP11.44□□□□□ -0.58
SKA3-204ENST00000462482 C15orf62A8K5M9 175 aa11.43□□□□□ -0.58
SKA3-204ENST00000462482 NUPL2O15504 423 aaKnown RBP11.43□□□□□ -0.58
SKA3-204ENST00000462482 YIF1AO95070 293 aa11.43□□□□□ -0.58
SKA3-204ENST00000462482 RPL35AP18077 110 aaKnown RBP11.43□□□□□ -0.58
SKA3-204ENST00000462482 ATF4P18848 351 aaPredicted RBP11.43□□□□□ -0.58
SKA3-204ENST00000462482 DHRS11Q6UWP2 260 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms