RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 HRNRQ86YZ3 2850 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-204ENST00000461897 A0A1W2PPQ1 181 aa10.21□□□□□ -0.77
COL4A6-204ENST00000461897 VSTM5A8MXK1 200 aa10.21□□□□□ -0.77
COL4A6-204ENST00000461897 ST8SIA5O15466 376 aa10.21□□□□□ -0.77
COL4A6-204ENST00000461897 PROP1O75360 226 aa10.21□□□□□ -0.77
COL4A6-204ENST00000461897 SELLP14151 372 aa10.21□□□□□ -0.77
COL4A6-204ENST00000461897 TNFRSF1AP19438 455 aa10.21□□□□□ -0.77
COL4A6-204ENST00000461897 APOBEC3AP31941 199 aaPredicted RBP10.21□□□□□ -0.77
COL4A6-204ENST00000461897 RPL15P61313 204 aaKnown RBP10.21□□□□□ -0.77
COL4A6-204ENST00000461897 EFNB3Q15768 340 aa10.21□□□□□ -0.77
COL4A6-204ENST00000461897 ZNRF1Q8ND25 227 aa10.21□□□□□ -0.77
COL4A6-204ENST00000461897 NOL4LQ96MY1 436 aaPredicted RBP10.21□□□□□ -0.77
COL4A6-204ENST00000461897 A0A087X0M5 115 aa10.21□□□□□ -0.78
COL4A6-204ENST00000461897 A0A1B0GX30 115 aa10.21□□□□□ -0.78
COL4A6-204ENST00000461897 ITGB1BP1O14713 200 aa10.21□□□□□ -0.78
COL4A6-204ENST00000461897 YPEL1O60688 119 aa10.21□□□□□ -0.78
COL4A6-204ENST00000461897 STAG3L2P0CL84 134 aa10.21□□□□□ -0.78
COL4A6-204ENST00000461897 STAG3L3P0CL85 134 aa10.21□□□□□ -0.78
COL4A6-204ENST00000461897 SSTP61278 116 aa10.21□□□□□ -0.78
COL4A6-204ENST00000461897 EDDM3AQ14507 147 aa10.21□□□□□ -0.78
COL4A6-204ENST00000461897 DUX4L9Q6RFH8 374 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-204ENST00000461897 YPEL2Q96QA6 119 aa10.21□□□□□ -0.78
COL4A6-204ENST00000461897 NCOR1P1Q9H4R4 102 aa10.21□□□□□ -0.78
COL4A6-204ENST00000461897 SAP30LQ9HAJ7 183 aa10.21□□□□□ -0.78
COL4A6-204ENST00000461897 TANC2Q9HCD6 1990 aa10.21□□□□□ -0.78
COL4A6-204ENST00000461897 DCHS2Q6V1P9 2916 aa10.2□□□□□ -0.78
COL4A6-204ENST00000461897 F2RL2O00254 374 aa10.2□□□□□ -0.78
COL4A6-204ENST00000461897 RBMXL2O75526 392 aaKnown RBP10.2□□□□□ -0.78
COL4A6-204ENST00000461897 KIR2DS2P43631 304 aa10.2□□□□□ -0.78
COL4A6-204ENST00000461897 HNF4GQ14541 408 aa10.2□□□□□ -0.78
COL4A6-204ENST00000461897 TEX36Q5VZQ5 186 aa10.2□□□□□ -0.78
COL4A6-204ENST00000461897 TREML4Q6UXN2 200 aa10.2□□□□□ -0.78
COL4A6-204ENST00000461897 BEND2Q8NDZ0 799 aa10.2□□□□□ -0.78
COL4A6-204ENST00000461897 TMEM204Q9BSN7 226 aa10.2□□□□□ -0.78
COL4A6-204ENST00000461897 DCTN5Q9BTE1 182 aa10.2□□□□□ -0.78
COL4A6-204ENST00000461897 DYNLRB1Q9NP97 96 aa10.2□□□□□ -0.78
COL4A6-204ENST00000461897 FUT9Q9Y231 359 aa10.2□□□□□ -0.78
COL4A6-204ENST00000461897 LSM4Q9Y4Z0 139 aaKnown RBP10.2□□□□□ -0.78
COL4A6-204ENST00000461897 DOCK11Q5JSL3 2073 aa10.2□□□□□ -0.78
COL4A6-204ENST00000461897 IGHV3-43A0A0B4J1X8 118 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 A8MWP6 167 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 B9A039 149 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 MGST3O14880 152 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 IGHV3-43DP0DP04 118 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 IL3RAP26951 378 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 GPR12P47775 334 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 ZNF672Q499Z4 452 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-204ENST00000461897 MORN2Q502X0 79 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 DEFB108BQ8NET1 73 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 ITLN2Q8WWU7 325 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-204ENST00000461897 TMEM18Q96B42 140 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 SDSLQ96GA7 329 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 RHOVQ96L33 236 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 GAFA1Q96PS6 74 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 DSCAML1Q8TD84 2053 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 TRAV9-1A0A075B6T8 112 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 IRF2P14316 349 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 ATP5G3P48201 142 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 CNN1P51911 297 aaKnown RBP10.19□□□□□ -0.78
COL4A6-204ENST00000461897 LINC00205P59089 165 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 RELBQ01201 579 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 SPINK9Q5DT21 86 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 RFESDQ8TAC1 157 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 PPP1R35Q8TAP8 253 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 DDB2Q92466 427 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 C2orf88Q9BSF0 95 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 GGTLC1Q9BX51 225 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 MS4A5Q9H3V2 200 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 PXMP4Q9Y6I8 212 aa10.19□□□□□ -0.78
COL4A6-204ENST00000461897 SPTBN1Q01082 2364 aaKnown RBP10.18□□□□□ -0.78
COL4A6-204ENST00000461897 TRAV38-1A0A0B4J264 116 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 A0A1W2PPV4 95 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 FCGR3BO75015 233 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 CXorf1O96002 111 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 DEFA4P12838 97 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 LOXL3P58215 753 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 RPS16P62249 146 aaKnown RBP10.18□□□□□ -0.78
COL4A6-204ENST00000461897 GCSAMLQ5JQS6 135 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 PRAMEF5Q5TYX0 476 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 ZNF788Q6ZQV5 615 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 ZNF664Q8N3J9 261 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 GBGT1Q8N5D6 347 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 FAM216BQ8N7L0 139 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 OR4A16Q8NH70 328 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 TMEM37Q8WXS4 190 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 MGST2Q99735 147 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 IFI27L2Q9H2X8 130 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 ABCA4P78363 2273 aa10.18□□□□□ -0.78
COL4A6-204ENST00000461897 FNDC10F2Z333 226 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 TMEM178BH3BS89 294 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 NDUFB4O95168 129 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 CGB3P0DN86 165 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 CGB7P0DN87 165 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 CHRNA7P36544 502 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 EDDM3BP56851 147 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 YPEL3P61236 119 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-204ENST00000461897 ERVK-16P61578 105 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 FAM78BQ5VT40 261 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 SSX9Q7RTT3 188 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 MUC15Q8N387 334 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms