RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 RND3P61587 244 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 FAM209BQ5JX69 171 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 CTRB2Q6GPI1 263 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 H2BFWTQ7Z2G1 175 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 OR13C8Q8NGS7 320 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 TERB2Q8NHR7 220 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 MRGPRFQ96AM1 343 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 EEF1AKMT3Q96AZ1 226 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 SRSF8Q9BRL6 282 aaKnown RBP11.79□□□□□ -0.52
VARS-219ENST00000461328 PRNDQ9UKY0 176 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.78□□□□□ -0.52
VARS-219ENST00000461328 IGLC7A0M8Q6 106 aa11.78□□□□□ -0.52
VARS-219ENST00000461328 CGB1A6NKQ9 187 aa11.78□□□□□ -0.52
VARS-219ENST00000461328 H0Y980 276 aa11.78□□□□□ -0.52
VARS-219ENST00000461328 TNFSF8P32971 234 aa11.78□□□□□ -0.52
VARS-219ENST00000461328 TRIM16LQ309B1 348 aa11.78□□□□□ -0.52
VARS-219ENST00000461328 HSD17B13Q7Z5P4 300 aaPredicted RBP11.78□□□□□ -0.52
VARS-219ENST00000461328 HAPLN4Q86UW8 402 aa11.78□□□□□ -0.52
VARS-219ENST00000461328 OR10W1Q8NGF6 305 aa11.78□□□□□ -0.52
VARS-219ENST00000461328 OR9G4Q8NGQ1 327 aa11.78□□□□□ -0.52
VARS-219ENST00000461328 MARCH1Q8TCQ1 289 aa11.78□□□□□ -0.52
VARS-219ENST00000461328 FKBP11Q9NYL4 201 aa11.78□□□□□ -0.52
VARS-219ENST00000461328 C14orf166Q9Y224 244 aaKnown RBP11.78□□□□□ -0.52
VARS-219ENST00000461328 S4R3C0 116 aa11.78□□□□□ -0.52
VARS-219ENST00000461328 COL7A1Q02388 2944 aa11.78□□□□□ -0.52
VARS-219ENST00000461328 TEX50A0A1B0GTY4 177 aa11.77□□□□□ -0.53
VARS-219ENST00000461328 C15orf61A6NNL5 157 aa11.77□□□□□ -0.53
VARS-219ENST00000461328 BMPR1BO00238 502 aa11.77□□□□□ -0.53
VARS-219ENST00000461328 NDUFB8O95169 186 aa11.77□□□□□ -0.53
VARS-219ENST00000461328 OR13C7P0DN81 318 aa11.77□□□□□ -0.53
VARS-219ENST00000461328 SPNP16150 400 aa11.77□□□□□ -0.53
VARS-219ENST00000461328 S100A5P33763 92 aa11.77□□□□□ -0.53
VARS-219ENST00000461328 AKR1C2P52895 323 aa11.77□□□□□ -0.53
VARS-219ENST00000461328 KLF5Q13887 457 aaPredicted RBP11.77□□□□□ -0.53
VARS-219ENST00000461328 OR4C16Q8NGL9 310 aa11.77□□□□□ -0.53
VARS-219ENST00000461328 OR4A16Q8NH70 328 aa11.77□□□□□ -0.53
VARS-219ENST00000461328 RNASE11Q8TAA1 199 aaKnown RBP11.77□□□□□ -0.53
VARS-219ENST00000461328 LSM10Q969L4 123 aaKnown RBP11.77□□□□□ -0.53
VARS-219ENST00000461328 FANCD2OSQ96PS1 177 aa11.77□□□□□ -0.53
VARS-219ENST00000461328 NXF2Q9GZY0 626 aaKnown RBP11.77□□□□□ -0.53
VARS-219ENST00000461328 THYN1Q9P016 225 aa11.77□□□□□ -0.53
VARS-219ENST00000461328 SMAD5-AS1Q9Y6J3 95 aa11.77□□□□□ -0.53
VARS-219ENST00000461328 IGLV11-55A0A075B6I3 123 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 C3orf85A0A1B0GTC6 90 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 PPP5D1E7EU14 171 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 GSTZ1O43708 216 aaPredicted RBP11.76□□□□□ -0.53
VARS-219ENST00000461328 ATG12O94817 140 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 IGKV1-39P01597 117 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 IGKV1D-39P04432 117 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 CTSDP07339 412 aaPredicted RBP11.76□□□□□ -0.53
VARS-219ENST00000461328 NHLRC4P0CG21 123 aaPredicted RBP11.76□□□□□ -0.53
VARS-219ENST00000461328 GP9P14770 177 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 PTBP1P26599 531 aaKnown RBP eCLIP11.76□□□□□ -0.53
VARS-219ENST00000461328 ARL3P36405 182 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 PYDC2Q56P42 97 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 CLEC19AQ6UXS0 136 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 GDPD1Q8N9F7 314 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 OR5B3Q8NH48 314 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 SEC22AQ96IW7 307 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 CXorf58Q96LI9 332 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 TMEM56Q96MV1 263 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 TP53RKQ96S44 253 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 PRRT1Q99946 306 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 MCUBQ9NWR8 336 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 PEMTQ9UBM1 199 aa11.76□□□□□ -0.53
VARS-219ENST00000461328 TEX13DA0A0J9YY54 714 aaPredicted RBP11.75□□□□□ -0.53
VARS-219ENST00000461328 MFSD2BA6NFX1 497 aa11.75□□□□□ -0.53
VARS-219ENST00000461328 GGCTO75223 188 aaKnown RBP11.75□□□□□ -0.53
VARS-219ENST00000461328 WT1-ASQ06250 92 aa11.75□□□□□ -0.53
VARS-219ENST00000461328 SP6Q3SY56 376 aa11.75□□□□□ -0.53
VARS-219ENST00000461328 SLC25A24Q6NUK1 477 aa11.75□□□□□ -0.53
VARS-219ENST00000461328 CADM3Q8N126 398 aa11.75□□□□□ -0.53
VARS-219ENST00000461328 CCDC140Q96MF4 163 aa11.75□□□□□ -0.53
VARS-219ENST00000461328 ASCL2Q99929 193 aa11.75□□□□□ -0.53
VARS-219ENST00000461328 RBM38Q9H0Z9 239 aaKnown RBP11.75□□□□□ -0.53
VARS-219ENST00000461328 NDUFA4L2Q9NRX3 87 aa11.75□□□□□ -0.53
VARS-219ENST00000461328 TMEM14BQ9NUH8 114 aa11.75□□□□□ -0.53
VARS-219ENST00000461328 TRBV7-1A0A0A6YYK4 115 aa11.74□□□□□ -0.53
VARS-219ENST00000461328 ANKRD20A5PA0PJZ0 165 aa11.74□□□□□ -0.53
VARS-219ENST00000461328 HLA-AP01891 365 aaKnown RBP11.74□□□□□ -0.53
VARS-219ENST00000461328 SURF2Q15527 256 aaPredicted RBP11.74□□□□□ -0.53
VARS-219ENST00000461328 OR51S1Q8NGJ8 323 aa11.74□□□□□ -0.53
VARS-219ENST00000461328 SCP2D1Q9UJQ7 156 aa11.74□□□□□ -0.53
VARS-219ENST00000461328 DBX1A6NMT0 343 aa11.73□□□□□ -0.53
VARS-219ENST00000461328 ZNF701M0R085 212 aaPredicted RBP11.73□□□□□ -0.53
VARS-219ENST00000461328 B3GALNT1O75752 331 aa11.73□□□□□ -0.53
VARS-219ENST00000461328 OR2C1O95371 312 aa11.73□□□□□ -0.53
VARS-219ENST00000461328 IGLV1-51P01701 117 aa11.73□□□□□ -0.53
VARS-219ENST00000461328 GPR183P32249 361 aa11.73□□□□□ -0.53
VARS-219ENST00000461328 FAUP35544 74 aaKnown RBP11.73□□□□□ -0.53
VARS-219ENST00000461328 DYNLRB2Q8TF09 96 aa11.73□□□□□ -0.53
VARS-219ENST00000461328 RRNAD1Q96FB5 475 aaKnown RBP11.73□□□□□ -0.53
VARS-219ENST00000461328 THAP7Q9BT49 309 aaPredicted RBP11.73□□□□□ -0.53
VARS-219ENST00000461328 PDCD10Q9BUL8 212 aa11.73□□□□□ -0.53
VARS-219ENST00000461328 PLEKHA3Q9HB20 300 aa11.73□□□□□ -0.53
VARS-219ENST00000461328 ZC4H2Q9NQZ6 224 aa11.73□□□□□ -0.53
VARS-219ENST00000461328 F11RQ9Y624 299 aaKnown RBP11.73□□□□□ -0.53
VARS-219ENST00000461328 U3KQK5 164 aa11.73□□□□□ -0.53
VARS-219ENST00000461328 CSN3P07498 182 aa11.72□□□□□ -0.53
VARS-219ENST00000461328 OR5AC1P0C628 307 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms