RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TNFRSF9Q07011 255 aa12.94□□□□□ -0.34
TOP3A-202ENST00000461127 SURF2Q15527 256 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-202ENST00000461127 AADACL3Q5VUY0 350 aa12.94□□□□□ -0.34
TOP3A-202ENST00000461127 LPCAT3Q6P1A2 487 aa12.94□□□□□ -0.34
TOP3A-202ENST00000461127 SLC38A6Q8IZM9 456 aa12.94□□□□□ -0.34
TOP3A-202ENST00000461127 DUSP18Q8NEJ0 188 aa12.94□□□□□ -0.34
TOP3A-202ENST00000461127 ZFAND1Q8TCF1 268 aa12.94□□□□□ -0.34
TOP3A-202ENST00000461127 C20orf85Q9H1P6 137 aa12.94□□□□□ -0.34
TOP3A-202ENST00000461127 NUDT15Q9NV35 164 aa12.94□□□□□ -0.34
TOP3A-202ENST00000461127 C14orf166Q9Y224 244 aaKnown RBP12.94□□□□□ -0.34
TOP3A-202ENST00000461127 TRAV6A0A075B6T7 132 aa12.93□□□□□ -0.34
TOP3A-202ENST00000461127 IGKV1D-13A0A0B4J2D9 117 aa12.93□□□□□ -0.34
TOP3A-202ENST00000461127 ST8SIA5O15466 376 aa12.93□□□□□ -0.34
TOP3A-202ENST00000461127 H2AFB2P0C5Z0 115 aa12.93□□□□□ -0.34
TOP3A-202ENST00000461127 IGKV1-13P0DP09 117 aa12.93□□□□□ -0.34
TOP3A-202ENST00000461127 UCP3P55916 312 aa12.93□□□□□ -0.34
TOP3A-202ENST00000461127 RPS16P62249 146 aaKnown RBP12.93□□□□□ -0.34
TOP3A-202ENST00000461127 OXA1LQ15070 435 aa12.93□□□□□ -0.34
TOP3A-202ENST00000461127 RPL39P5Q59GN2 51 aa12.93□□□□□ -0.34
TOP3A-202ENST00000461127 TMED4Q7Z7H5 227 aa12.93□□□□□ -0.34
TOP3A-202ENST00000461127 CENPSQ8N2Z9 138 aa12.93□□□□□ -0.34
TOP3A-202ENST00000461127 OR5AN1Q8NGI8 311 aa12.93□□□□□ -0.34
TOP3A-202ENST00000461127 COA4Q9NYJ1 87 aa12.93□□□□□ -0.34
TOP3A-202ENST00000461127 ZNF221Q9UK13 617 aa12.93□□□□□ -0.34
TOP3A-202ENST00000461127 KIAA1109Q2LD37 5005 aa12.93□□□□□ -0.34
TOP3A-202ENST00000461127 LOC102724200A0A096LPH7 203 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-202ENST00000461127 ITGB1BP1O14713 200 aa12.92□□□□□ -0.34
TOP3A-202ENST00000461127 SLC22A5O76082 557 aa12.92□□□□□ -0.34
TOP3A-202ENST00000461127 S100GP29377 79 aa12.92□□□□□ -0.34
TOP3A-202ENST00000461127 DEFB114Q30KQ6 69 aa12.92□□□□□ -0.34
TOP3A-202ENST00000461127 LYG2Q86SG7 212 aa12.92□□□□□ -0.34
TOP3A-202ENST00000461127 MRGPRFQ96AM1 343 aa12.92□□□□□ -0.34
TOP3A-202ENST00000461127 OR2D2Q9H210 308 aa12.92□□□□□ -0.34
TOP3A-202ENST00000461127 CCL28Q9NRJ3 127 aa12.92□□□□□ -0.34
TOP3A-202ENST00000461127 FLVCR2Q9UPI3 526 aa12.92□□□□□ -0.34
TOP3A-202ENST00000461127 CTSDP07339 412 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-202ENST00000461127 ATF4P18848 351 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-202ENST00000461127 DEFA5Q01523 94 aa12.91□□□□□ -0.34
TOP3A-202ENST00000461127 CMTM1Q8IZ96 169 aa12.91□□□□□ -0.34
TOP3A-202ENST00000461127 TMEM217Q8N7C4 229 aa12.91□□□□□ -0.34
TOP3A-202ENST00000461127 ZNF645Q8N7E2 425 aa12.91□□□□□ -0.34
TOP3A-202ENST00000461127 ZNF486Q96H40 463 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-202ENST00000461127 ZC4H2Q9NQZ6 224 aa12.91□□□□□ -0.34
TOP3A-202ENST00000461127 TECRQ9NZ01 308 aaKnown RBP12.91□□□□□ -0.34
TOP3A-202ENST00000461127 GPR132Q9UNW8 380 aa12.91□□□□□ -0.34
TOP3A-202ENST00000461127 INMT-MINDY4F8WBC2 141 aa12.9□□□□□ -0.34
TOP3A-202ENST00000461127 GPR31O00270 319 aa12.9□□□□□ -0.34
TOP3A-202ENST00000461127 PI3P19957 117 aa12.9□□□□□ -0.34
TOP3A-202ENST00000461127 BMI1P35226 326 aa12.9□□□□□ -0.34
TOP3A-202ENST00000461127 TAS2R31P59538 309 aa12.9□□□□□ -0.34
TOP3A-202ENST00000461127 EWSR1Q01844 656 aaKnown RBP eCLIP12.9□□□□□ -0.34
TOP3A-202ENST00000461127 WFDC3Q8IUB2 231 aa12.9□□□□□ -0.34
TOP3A-202ENST00000461127 CCDC71LQ8N9Z2 235 aa12.9□□□□□ -0.34
TOP3A-202ENST00000461127 ABHD14BQ96IU4 210 aa12.9□□□□□ -0.34
TOP3A-202ENST00000461127 TP53TG1Q9Y2A0 90 aa12.9□□□□□ -0.34
TOP3A-202ENST00000461127 DHFRP00374 187 aa12.89□□□□□ -0.35
TOP3A-202ENST00000461127 AKR1C4P17516 323 aa12.89□□□□□ -0.35
TOP3A-202ENST00000461127 KIR2DS2P43631 304 aa12.89□□□□□ -0.35
TOP3A-202ENST00000461127 PHLDA2Q53GA4 152 aa12.89□□□□□ -0.35
TOP3A-202ENST00000461127 ZNF818PQ6ZRF7 136 aa12.89□□□□□ -0.35
TOP3A-202ENST00000461127 WDR89Q96FK6 387 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-202ENST00000461127 AGMATQ9BSE5 352 aa12.89□□□□□ -0.35
TOP3A-202ENST00000461127 MARVELD1Q9BSK0 173 aa12.89□□□□□ -0.35
TOP3A-202ENST00000461127 C5orf66Q9H5L9 145 aa12.89□□□□□ -0.35
TOP3A-202ENST00000461127 BMPR1BO00238 502 aa12.88□□□□□ -0.35
TOP3A-202ENST00000461127 SPRY2O43597 315 aa12.88□□□□□ -0.35
TOP3A-202ENST00000461127 APOA2P02652 100 aa12.88□□□□□ -0.35
TOP3A-202ENST00000461127 IGKV1-16P04430 117 aa12.88□□□□□ -0.35
TOP3A-202ENST00000461127 FOLR2P14207 255 aa12.88□□□□□ -0.35
TOP3A-202ENST00000461127 ANXA7P20073 488 aaKnown RBP12.88□□□□□ -0.35
TOP3A-202ENST00000461127 GNRHRP30968 328 aa12.88□□□□□ -0.35
TOP3A-202ENST00000461127 PIGPP57054 158 aa12.88□□□□□ -0.35
TOP3A-202ENST00000461127 MSMO1Q15800 293 aa12.88□□□□□ -0.35
TOP3A-202ENST00000461127 ANKRD55Q3KP44 614 aa12.88□□□□□ -0.35
TOP3A-202ENST00000461127 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-202ENST00000461127 ZBTB34Q8NCN2 500 aa12.88□□□□□ -0.35
TOP3A-202ENST00000461127 OR52B4Q8NGK2 314 aa12.88□□□□□ -0.35
TOP3A-202ENST00000461127 PHLDA1Q8WV24 401 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-202ENST00000461127 RTBDNQ9BSG5 229 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-202ENST00000461127 SLC2A9Q9NRM0 540 aa12.88□□□□□ -0.35
TOP3A-202ENST00000461127 TEX13DA0A0J9YY54 714 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-202ENST00000461127 TNFSF12O43508 249 aa12.87□□□□□ -0.35
TOP3A-202ENST00000461127 C4orf46Q504U0 113 aa12.87□□□□□ -0.35
TOP3A-202ENST00000461127 Q6ZWC4 215 aa12.87□□□□□ -0.35
TOP3A-202ENST00000461127 SLC25A42Q86VD7 318 aa12.87□□□□□ -0.35
TOP3A-202ENST00000461127 PDPNQ86YL7 162 aa12.87□□□□□ -0.35
TOP3A-202ENST00000461127 DRAXINQ8NBI3 349 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-202ENST00000461127 ADAD2Q8NCV1 583 aaKnown RBP12.87□□□□□ -0.35
TOP3A-202ENST00000461127 PHB2Q99623 299 aa12.87□□□□□ -0.35
TOP3A-202ENST00000461127 SDHAF2Q9NX18 166 aa12.87□□□□□ -0.35
TOP3A-202ENST00000461127 MUC4Q99102 2169 aa12.86□□□□□ -0.35
TOP3A-202ENST00000461127 C2orf70A6NJV1 201 aa12.86□□□□□ -0.35
TOP3A-202ENST00000461127 FAM223BA6NKX1 122 aa12.86□□□□□ -0.35
TOP3A-202ENST00000461127 M0R1X1 148 aa12.86□□□□□ -0.35
TOP3A-202ENST00000461127 PRAF2O60831 178 aa12.86□□□□□ -0.35
TOP3A-202ENST00000461127 APOC4P55056 127 aa12.86□□□□□ -0.35
TOP3A-202ENST00000461127 UBE2MP61081 183 aaKnown RBP12.86□□□□□ -0.35
TOP3A-202ENST00000461127 RND3P61587 244 aa12.86□□□□□ -0.35
TOP3A-202ENST00000461127 EXOSC2Q13868 293 aaKnown RBP12.86□□□□□ -0.35
TOP3A-202ENST00000461127 TMEM128Q5BJH2 165 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms