RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 ZFP57Q9NU63 452 aa10.89□□□□□ -0.67
HDLBP-229ENST00000460826 TMEM14BQ9NUH8 114 aa10.89□□□□□ -0.67
HDLBP-229ENST00000460826 COA4Q9NYJ1 87 aa10.89□□□□□ -0.67
HDLBP-229ENST00000460826 PRNDQ9UKY0 176 aa10.89□□□□□ -0.67
HDLBP-229ENST00000460826 IGLC7A0M8Q6 106 aa10.88□□□□□ -0.67
HDLBP-229ENST00000460826 ATG12O94817 140 aa10.88□□□□□ -0.67
HDLBP-229ENST00000460826 TRGV3P03979 118 aa10.88□□□□□ -0.67
HDLBP-229ENST00000460826 TRAPPC2P0DI81 140 aa10.88□□□□□ -0.67
HDLBP-229ENST00000460826 TRAPPC2BP0DI82 140 aa10.88□□□□□ -0.67
HDLBP-229ENST00000460826 ANXA3P12429 323 aa10.88□□□□□ -0.67
HDLBP-229ENST00000460826 CDX1P47902 265 aaPredicted RBP10.88□□□□□ -0.67
HDLBP-229ENST00000460826 C8orf86Q6ZUL3 223 aa10.88□□□□□ -0.67
HDLBP-229ENST00000460826 LYZL2Q7Z4W2 148 aa10.88□□□□□ -0.67
HDLBP-229ENST00000460826 KLHL30-AS1Q8NEE0 82 aa10.88□□□□□ -0.67
HDLBP-229ENST00000460826 RNASE11Q8TAA1 199 aaKnown RBP10.88□□□□□ -0.67
HDLBP-229ENST00000460826 IL22RA2Q969J5 263 aa10.88□□□□□ -0.67
HDLBP-229ENST00000460826 RRNAD1Q96FB5 475 aaKnown RBP10.88□□□□□ -0.67
HDLBP-229ENST00000460826 HINT2Q9BX68 163 aa10.88□□□□□ -0.67
HDLBP-229ENST00000460826 NDUFA4L2Q9NRX3 87 aa10.88□□□□□ -0.67
HDLBP-229ENST00000460826 TRAV6A0A075B6T7 132 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 FAM240BA0A1B0GVZ2 78 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 C9orf170A2RU37 121 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 NUDT19A8MXV4 375 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 H3BUA1 57 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 OR4E1P0C645 316 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 PSMB6P28072 239 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 TPPP2P59282 170 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 UBE2MP61081 183 aaKnown RBP10.87□□□□□ -0.67
HDLBP-229ENST00000460826 WT1-ASQ06250 92 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 SPINK9Q5DT21 86 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 PRR31Q5SQ13 230 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 MZT2BQ6NZ67 158 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 ETV3LQ6ZN32 361 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 LGI3Q8N145 548 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 OR5B3Q8NH48 314 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 DUX3Q96PT4 197 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 OR5B12Q96R08 314 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 NUDT15Q9NV35 164 aa10.87□□□□□ -0.67
HDLBP-229ENST00000460826 A0A0B4J2A0 478 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 NPIPB5A8MRT5 1133 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 ST8SIA3O43173 380 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 BRI3O95415 125 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 IGHV3-11P01762 117 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 HLA-AP01891 365 aaKnown RBP10.86□□□□□ -0.67
HDLBP-229ENST00000460826 CRYGCP07315 174 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 CTRB1P17538 263 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 HSPE1P61604 102 aaKnown RBP10.86□□□□□ -0.67
HDLBP-229ENST00000460826 SRPXP78539 464 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 DHRS2Q13268 280 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 DEFB136Q30KP8 78 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 NMSQ5H8A3 153 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 CTRB2Q6GPI1 263 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 ZNF429Q86V71 674 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 FAM219AQ8IW50 185 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 LSM10Q969L4 123 aaKnown RBP10.86□□□□□ -0.67
HDLBP-229ENST00000460826 UBE2E2Q96LR5 201 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 ALX4Q9H161 411 aaPredicted RBP10.86□□□□□ -0.67
HDLBP-229ENST00000460826 SLA2Q9H6Q3 261 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 FKBP11Q9NYL4 201 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 CACNG5Q9UF02 275 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 SHPKQ9UHJ6 478 aa10.86□□□□□ -0.67
HDLBP-229ENST00000460826 NOTCH1P46531 2555 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 TRBV9A0A0B4J1U6 114 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 I3L521 148 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 OR13C7P0DN81 318 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 RAB25P57735 213 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 PRCDQ00LT1 54 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 C4orf46Q504U0 113 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 THOC7Q6I9Y2 204 aaKnown RBP10.85□□□□□ -0.67
HDLBP-229ENST00000460826 LYG2Q86SG7 212 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 LRTM2Q8N967 370 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 OR4F17Q8NGA8 305 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 OR52B4Q8NGK2 314 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 C4orf3Q8WVX3 66 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 RAX2Q96IS3 184 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 FANCD2OSQ96PS1 177 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 OR4F4Q96R69 305 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 SRSF8Q9BRL6 282 aaKnown RBP10.85□□□□□ -0.67
HDLBP-229ENST00000460826 ZNF257Q9Y2Q1 563 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 DMRT1Q9Y5R6 373 aa10.85□□□□□ -0.67
HDLBP-229ENST00000460826 OR2J3O76001 311 aa10.84□□□□□ -0.67
HDLBP-229ENST00000460826 H2AFB2P0C5Z0 115 aa10.84□□□□□ -0.67
HDLBP-229ENST00000460826 RHOGP84095 191 aa10.84□□□□□ -0.67
HDLBP-229ENST00000460826 AARDQ4LEZ3 155 aa10.84□□□□□ -0.67
HDLBP-229ENST00000460826 TREML4Q6UXN2 200 aa10.84□□□□□ -0.67
HDLBP-229ENST00000460826 NRARPQ7Z6K4 114 aa10.84□□□□□ -0.67
HDLBP-229ENST00000460826 ENKURQ8TC29 256 aa10.84□□□□□ -0.67
HDLBP-229ENST00000460826 SEC22CQ9BRL7 303 aa10.84□□□□□ -0.67
HDLBP-229ENST00000460826 IGLV11-55A0A075B6I3 123 aa10.83□□□□□ -0.68
HDLBP-229ENST00000460826 DUXBA0A1W2PPF3 345 aa10.83□□□□□ -0.68
HDLBP-229ENST00000460826 NXPH3O95157 252 aa10.83□□□□□ -0.68
HDLBP-229ENST00000460826 NDUFB8O95169 186 aa10.83□□□□□ -0.68
HDLBP-229ENST00000460826 HOXB5P09067 269 aa10.83□□□□□ -0.68
HDLBP-229ENST00000460826 LGALS1P09382 135 aaKnown RBP10.83□□□□□ -0.68
HDLBP-229ENST00000460826 SULT1A3P0DMM9 295 aa10.83□□□□□ -0.68
HDLBP-229ENST00000460826 SULT1A4P0DMN0 295 aa10.83□□□□□ -0.68
HDLBP-229ENST00000460826 MECP2P51608 486 aaKnown RBP10.83□□□□□ -0.68
HDLBP-229ENST00000460826 MFAP2P55001 183 aa10.83□□□□□ -0.68
HDLBP-229ENST00000460826 RUNX1Q01196 453 aa10.83□□□□□ -0.68
HDLBP-229ENST00000460826 KLK9Q2XQG4 91 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms