RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 C3orf18Q9UK00 162 aa0.19□□□□□ -2.38
PTPN22-203ENST00000460620 GUCA1BQ9UMX6 200 aa0.19□□□□□ -2.38
PTPN22-203ENST00000460620 POLR1DQ9Y2S0 133 aa0.19□□□□□ -2.38
PTPN22-203ENST00000460620 FAM215AQ9Y5M1 114 aa0.19□□□□□ -2.38
PTPN22-203ENST00000460620 ADCY9O60503 1353 aa0.19□□□□□ -2.38
PTPN22-203ENST00000460620 SETD5Q9C0A6 1442 aa0.19□□□□□ -2.38
PTPN22-203ENST00000460620 COL4A5P29400 1685 aa0.19□□□□□ -2.38
PTPN22-203ENST00000460620 TAF1LQ8IZX4 1826 aa0.19□□□□□ -2.38
PTPN22-203ENST00000460620 TRPM7Q96QT4 1865 aa0.19□□□□□ -2.38
PTPN22-203ENST00000460620 ALPK3Q96L96 1907 aa0.19□□□□□ -2.38
PTPN22-203ENST00000460620 TANC2Q9HCD6 1990 aa0.19□□□□□ -2.38
PTPN22-203ENST00000460620 CACNA1BQ00975 2339 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 FREM3P0C091 2139 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 ZGRF1Q86YA3 2104 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 SNAPC4Q5SXM2 1469 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 MTUS2Q5JR59 1369 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 TTC21AQ8NDW8 1320 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 ZNF532Q9HCE3 1301 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 TRBV20OR9-2A0A075B6H5 130 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 A0A0A6YYH2 397 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 IGHV1-18A0A0C4DH31 117 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 GRIFINA4D1Z8 144 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 TMEM235A6NFC5 223 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 A6NJ64 397 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 OR4C45A6NMZ5 311 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 HMSDA8MTL9 139 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 C2orf74A8MZ97 194 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 IBA57-AS1B1ANH7 110 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 EEF1E1-BLOC1S5C9J1V9 151 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 LRRN3E7EW58 273 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 GOLGA6L19H0YKK7 550 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 H7C2G1 150 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 FAAHO00519 579 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 NIPSNAP2O75323 286 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 CIAO1O76071 339 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 AHSA1O95433 338 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 NPYP01303 97 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 IFNA5P01569 189 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 IGKV1-5P01602 117 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 C1QCP02747 245 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 UBBP0CG47 229 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 ZNF705DP0CH99 300 aaPredicted RBP0.18□□□□□ -2.38
PTPN22-203ENST00000460620 C8orf88P0DMB2 117 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 GPX2P18283 190 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 ATP6V0CP27449 155 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 ALDH3A1P30838 453 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 CD79BP40259 229 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 CSN1S1P47710 185 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 SERPINB9P50453 376 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 IDH3GP51553 393 aaPredicted RBP0.18□□□□□ -2.38
PTPN22-203ENST00000460620 AKR1C2P52895 323 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 NKX2-5P52952 324 aaPredicted RBP0.18□□□□□ -2.38
PTPN22-203ENST00000460620 OR4D2P58180 307 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 FXYD7P58549 80 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 TPI1P60174 286 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 TMEM258P61165 79 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 LSM6P62312 80 aaKnown RBP0.18□□□□□ -2.38
PTPN22-203ENST00000460620 FABP9Q0Z7S8 132 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 PMAIP1Q13794 54 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 CDK5R1Q15078 307 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 SURF2Q15527 256 aaPredicted RBP0.18□□□□□ -2.38
PTPN22-203ENST00000460620 MIAQ16674 131 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 PLPPR5Q32ZL2 321 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 HIST2H3PS2Q5TEC6 136 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 AADACL3Q5VUY0 350 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 Q6ZTI0 123 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 SLC36A1Q7Z2H8 476 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 SLC51BQ86UW2 128 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 CLVS1Q8IUQ0 354 aaPredicted RBP0.18□□□□□ -2.38
PTPN22-203ENST00000460620 SLC22A24Q8N4F4 322 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 TBC1D19Q8N5T2 526 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 ANKRD29Q8N6D5 301 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 ZNF439Q8NDP4 499 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 OR1M1Q8NGA1 313 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 OR8J2Q8NGG1 315 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 OR5J2Q8NH18 312 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 PIGXQ8TBF5 258 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 ITFG2Q969R8 447 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 SLC35B4Q969S0 331 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 MS4A6EQ96DS6 147 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 MRPS24Q96EL2 167 aaKnown RBP0.18□□□□□ -2.38
PTPN22-203ENST00000460620 CPNE2Q96FN4 548 aaPredicted RBP0.18□□□□□ -2.38
PTPN22-203ENST00000460620 WDR61Q9GZS3 305 aaKnown RBP0.18□□□□□ -2.38
PTPN22-203ENST00000460620 HDHD2Q9H0R4 259 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 EFCAB1Q9HAE3 211 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 HES4Q9HCC6 221 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 C14orf105Q9NVL8 296 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 NDUFB11Q9NX14 153 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 NKIRAS1Q9NYS0 192 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 IL36BQ9NZH7 164 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 FUT9Q9Y231 359 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 NOSIPQ9Y314 301 aaKnown RBP0.18□□□□□ -2.38
PTPN22-203ENST00000460620 CITO14578 2027 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 NUP98P52948 1817 aa0.18□□□□□ -2.38
PTPN22-203ENST00000460620 SCAF11Q99590 1463 aaKnown RBP0.17□□□□□ -2.38
PTPN22-203ENST00000460620 CCDC144AA2RUR9 1427 aa0.17□□□□□ -2.38
PTPN22-203ENST00000460620 ABCC11Q96J66 1382 aa0.17□□□□□ -2.38
PTPN22-203ENST00000460620 ROBO3Q96MS0 1386 aa0.17□□□□□ -2.38
PTPN22-203ENST00000460620 IGHV3-64A0A075B6Q5 118 aa0.17□□□□□ -2.38
PTPN22-203ENST00000460620 TRGV2A0A075B6R0 118 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms