RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 LIME1Q9H400 295 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 METRNQ9UJH8 293 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 CDC42EP3Q9UKI2 254 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 EPG5Q9HCE0 2579 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 DYSFO75923 2080 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 IGKV1D-17A0A075B6S4 117 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 TMEM30CPA0ZSE6 113 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 PRB1P04280 392 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 GAGE5Q13069 117 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 GAGE6Q13070 117 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 PMS2P11Q13670 270 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 EFNB3Q15768 340 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 OXLD1Q5BKU9 147 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 BTNL8Q6UX41 500 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 Q8TCH9 128 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 ACY3Q96HD9 319 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 TBX15Q96SF7 602 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 VPREB3Q9UKI3 123 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 ABCA4P78363 2273 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 H0Y980 276 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 PPYP01298 95 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 ZNF728P0DKX0 622 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 SRPXP78539 464 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 ZNF880Q6PDB4 577 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 TGIF2LYQ8IUE0 185 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 GAPTQ8N292 157 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 GALMQ96C23 342 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 DUX5Q96PT3 197 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 RTBDNQ9BSG5 229 aaPredicted RBP8.6□□□□□ -1.03
HERC4-207ENST00000460168 PPIAL4AQ9Y536 164 aa8.6□□□□□ -1.03
HERC4-207ENST00000460168 LRBAP50851 2863 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 HSD17B6O14756 317 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 AREGP15514 252 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 AADACP22760 399 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 F2RP25116 425 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 CD34P28906 385 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 MFAP4P55083 255 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 RAB32Q13637 225 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 EDDM3AQ14507 147 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 ABCA11PQ4W5N1 156 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 SLC35E4Q6ICL7 350 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 C5orf17Q8NAS9 161 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 ZNRF1Q8ND25 227 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 DEFB108BQ8NET1 73 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 OR52E5Q8NH55 327 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 CFHR4Q92496 578 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 CCL17Q92583 94 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 BBC3Q96PG8 261 aaPredicted RBP8.59□□□□□ -1.03
HERC4-207ENST00000460168 C20orf24Q9BUV8 137 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 GTSF1LQ9H1H1 148 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 MBNL3Q9NUK0 354 aaKnown RBP8.59□□□□□ -1.03
HERC4-207ENST00000460168 KCNIP1Q9NZI2 227 aa8.59□□□□□ -1.03
HERC4-207ENST00000460168 KIAA2026Q5HYC2 2103 aa8.59□□□□□ -1.04
HERC4-207ENST00000460168 IGKV1-6A0A0C4DH72 117 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 IGHV1-69-2A0A0G2JMI3 117 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 SLC17A3O00476 420 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 ZNF737O75373 536 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 DUS4LO95620 317 aaKnown RBP8.58□□□□□ -1.04
HERC4-207ENST00000460168 TPRX1Q8N7U7 411 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 LYPD6BQ8NI32 183 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 UBALD1Q8TB05 177 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 TMEM230Q96A57 120 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 COQ2Q96H96 371 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 TMEM204Q9BSN7 226 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 QTRT1Q9BXR0 403 aaKnown RBP8.58□□□□□ -1.04
HERC4-207ENST00000460168 TAF9BQ9HBM6 251 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 ZNF586Q9NXT0 402 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 ARFGEF3Q5TH69 2177 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 OOEPA6NGQ2 149 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 H7BYZ3 331 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 J3QR06 171 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 PET100P0DJ07 73 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 LOXP28300 417 aaPredicted RBP8.58□□□□□ -1.04
HERC4-207ENST00000460168 GLIPR1P48060 266 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 TAS2R30P59541 319 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 SRSF1Q07955 248 aaKnown RBP eCLIP8.58□□□□□ -1.04
HERC4-207ENST00000460168 ANKRD55Q3KP44 614 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 PSMG3Q9BT73 122 aaPredicted RBP8.58□□□□□ -1.04
HERC4-207ENST00000460168 UQCR10Q9UDW1 63 aa8.58□□□□□ -1.04
HERC4-207ENST00000460168 MRPS16Q9Y3D3 137 aaKnown RBP8.58□□□□□ -1.04
HERC4-207ENST00000460168 UMAD1C9J7I0 102 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 GYPAP02724 150 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 PHLDA2Q53GA4 152 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 LRRC10Q5BKY1 277 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 STUMQ69YW2 141 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 NEGR1Q7Z3B1 354 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 SGPP2Q8IWX5 399 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 RNF125Q96EQ8 232 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 CABLES2Q9BTV7 478 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 PARP11Q9NR21 331 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.57□□□□□ -1.04
HERC4-207ENST00000460168 DSCAMO60469 2012 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 TRBV6-7A0A0A0MS04 114 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 ZNF705FA8MVS1 300 aaPredicted RBP8.57□□□□□ -1.04
HERC4-207ENST00000460168 K7N7A8 449 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 MGST3O14880 152 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 YPEL1O60688 119 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 SFT2D2O95562 160 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 ZNF705DP0CH99 300 aaPredicted RBP8.57□□□□□ -1.04
HERC4-207ENST00000460168 ZNF705BP0CI00 300 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms