RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 EXOC3-AS1Q8N2X6 119 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 FER1L6-AS1Q8NA97 138 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 ZNF675Q8TD23 568 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 THEM6Q8WUY1 208 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 OR5P3Q8WZ94 311 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 UBE2WQ96B02 151 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 ROPN1LQ96C74 230 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 LYSMD1Q96S90 227 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 TCEAL7Q9BRU2 100 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 TSSK6Q9BXA6 273 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 TMEM126AQ9H061 195 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 SSR3Q9UNL2 185 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 WASHC3Q9Y3C0 194 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 NPATQ14207 1427 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 ROBO3Q96MS0 1386 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 ARAP3Q8WWN8 1544 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 CHD5Q8TDI0 1954 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 DENND4BO75064 1496 aaPredicted RBP2.72□□□□□ -1.97
CCDC50-203ENST00000460064 DNMT1P26358 1616 aaKnown RBP2.72□□□□□ -1.97
CCDC50-203ENST00000460064 A0A096LPI6 279 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 A0A1B0GV50 99 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 A0A1B0GX51 115 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 TMEM189A5PLL7 270 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 FAM25AB3EWG3 89 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 FAM25CB3EWG5 89 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 FAM25GB3EWG6 89 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 SYNGR2O43760 224 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 CPSF4O95639 269 aaKnown RBP2.72□□□□□ -1.97
CCDC50-203ENST00000460064 APOA2P02652 100 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 CRYBA1P05813 215 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 UBBP0CG47 229 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 ORM2P19652 201 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 DEFA3P59666 94 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 C12orf74Q32Q52 190 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 WDR59Q6PJI9 974 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 ATP5L2Q7Z4Y8 100 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 ANKRD29Q8N6D5 301 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 GDPD1Q8N9F7 314 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 LY6G5BQ8NDX9 201 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 OR13C4Q8NGS5 318 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 OR5K1Q8NHB7 308 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 CT55Q8WUE5 264 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 PLEKHB2Q96CS7 222 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 OR7D2Q96RA2 312 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 TRIB3Q96RU7 358 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 SERPINI1Q99574 410 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 DOHHQ9BU89 302 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 PBDC1Q9BVG4 233 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 TMEM147Q9BVK8 224 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 PRTFDC1Q9NRG1 225 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 TMEM216Q9P0N5 145 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 SLC23A2Q9UGH3 650 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 PXMP4Q9Y6I8 212 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 U3KQ87 197 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 ZSWIM8A7E2V4 1837 aa2.72□□□□□ -1.97
CCDC50-203ENST00000460064 PRR14LQ5THK1 2151 aa2.71□□□□□ -1.97
CCDC50-203ENST00000460064 OVOS2A0A0J9YW53 1432 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 OVOS2Q6IE36 1432 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 CHD2O14647 1828 aaKnown RBP2.71□□□□□ -1.98
CCDC50-203ENST00000460064 SPEF2Q9C093 1822 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 TRAV36DV7A0A075B6V5 113 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 TMED7-TICAM2A0A0A6YYA0 188 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 BORCS7-ASMTA0A0B4J1R7 106 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 KNCNA6PVL3 124 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 TMEM250H0YL14 139 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 J3KT08 172 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 TPST1O60507 370 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 ZNF682O95780 498 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 HLA-DRB1P01911 266 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 GYPCP04921 128 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 KDELR1P24390 212 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 GADD45AP24522 165 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 RBP2P50120 134 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 EMP1P54849 157 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 MP68P56378 58 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 PIGPP57054 158 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 GNG2P59768 71 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 TNFAIP6P98066 277 aaPredicted RBP2.71□□□□□ -1.98
CCDC50-203ENST00000460064 PLCXD2Q0VAA5 305 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 LYZL2Q7Z4W2 148 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 YIPF7Q8N8F6 280 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 TMEM75Q8N9X5 138 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 OR4A5Q8NH83 315 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 CANT1Q8WVQ1 401 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 MBD3L1Q8WWY6 194 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 TSPAN32Q96QS1 320 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 C20orf27Q9GZN8 174 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 CHST6Q9GZX3 395 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 OR2D2Q9H210 308 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 POPDC3Q9HBV1 291 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 KCNIP2Q9NS61 270 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 CALML5Q9NZT1 146 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 LINC00527Q9UJ94 153 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 MCTS1Q9ULC4 181 aaKnown RBP2.71□□□□□ -1.98
CCDC50-203ENST00000460064 ZNF443Q9Y2A4 671 aaPredicted RBP2.71□□□□□ -1.98
CCDC50-203ENST00000460064 ABCC12Q96J65 1359 aa2.71□□□□□ -1.98
CCDC50-203ENST00000460064 MYH2Q9UKX2 1941 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 LOC102725191A0A1B0GVB3 256 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 PVALEFA0A1B0GWK0 134 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 H3BSA7 217 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms