RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 FAM110AQ9BQ89 295 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 HINT2Q9BX68 163 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 QTRT1Q9BXR0 403 aaKnown RBP11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 WFDC10AQ9H1F0 79 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 PLEKHA2Q9HB19 425 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 COMMD9Q9P000 198 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 THYN1Q9P016 225 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 DMRT1Q9Y5R6 373 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 CGB1A6NKQ9 187 aa11.87□□□□□ -0.51
CHCHD3-204ENST00000457942 ZNF785A8K8V0 405 aa11.87□□□□□ -0.51
CHCHD3-204ENST00000457942 OR11H12B2RN74 326 aa11.87□□□□□ -0.51
CHCHD3-204ENST00000457942 CBLN1P23435 193 aa11.87□□□□□ -0.51
CHCHD3-204ENST00000457942 RORCP51449 518 aa11.87□□□□□ -0.51
CHCHD3-204ENST00000457942 RNASE12Q5GAN4 147 aaKnown RBP11.87□□□□□ -0.51
CHCHD3-204ENST00000457942 ZNF57Q68EA5 555 aaPredicted RBP11.87□□□□□ -0.51
CHCHD3-204ENST00000457942 CMTM1Q8IZ96 169 aa11.87□□□□□ -0.51
CHCHD3-204ENST00000457942 IGLC7A0M8Q6 106 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 TMEM213A2RRL7 107 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 RBMY1BA6NDE4 496 aaKnown RBP11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 RBMY1EA6NEQ0 496 aaKnown RBP11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 MARCH11A6NNE9 402 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 FAM25AB3EWG3 89 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 FAM25CB3EWG5 89 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 FAM25GB3EWG6 89 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 SCAF4O95104 1147 aaKnown RBP11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 CLEC3BP05452 202 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 RBMY1DP0C7P1 496 aaKnown RBP11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 GNRHRP30968 328 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 PRSS3P35030 304 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 POU2AF1Q16633 256 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 THOC7Q6I9Y2 204 aaKnown RBP11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 PLET1Q6UQ28 207 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 BTNL8Q6UX41 500 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 UXS1Q8NBZ7 420 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 OR52B4Q8NGK2 314 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 MOB3AQ96BX8 217 aa11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 SRSF8Q9BRL6 282 aaKnown RBP11.86□□□□□ -0.51
CHCHD3-204ENST00000457942 IGHV3-35A0A0C4DH35 117 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 A8MWP6 167 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 TRAPPC2P0DI81 140 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 TRAPPC2BP0DI82 140 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 OR13C7P0DN81 318 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 ELK1P19419 428 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 F2RP25116 425 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 LPAR6P43657 344 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 RPL5P46777 297 aaKnown RBP11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 SNX29P2Q8IUI4 249 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 TMEM61Q8N0U2 210 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 OR10W1Q8NGF6 305 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 OR6F1Q8NGZ6 308 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 FXYD6Q9H0Q3 95 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 HIPK2Q9H2X6 1198 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 MLXQ9UH92 298 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 PCLOQ9Y6V0 5065 aa11.85□□□□□ -0.51
CHCHD3-204ENST00000457942 SMIM31A0A1B0GVY4 71 aa11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 GPR31O00270 319 aa11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 PGLYRP1O75594 196 aaPredicted RBP11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 SNAPC5O75971 98 aa11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 KRASP01116 189 aa11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 ZNF182P17025 639 aaPredicted RBP11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 HLA-DMAP28067 261 aa11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 S100GP29377 79 aa11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 HRH1P35367 487 aa11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 TSPAN5P62079 268 aa11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 TM4SF20Q53R12 229 aa11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 SLC25A24Q6NUK1 477 aa11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 RBPMS2Q6ZRY4 209 aaKnown RBP11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 HSD17B13Q7Z5P4 300 aaPredicted RBP11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 GDPD1Q8N9F7 314 aa11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 OR1L8Q8NGR8 309 aa11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 ZNF502Q8TBZ5 544 aa11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 DGCR14Q96DF8 476 aaKnown RBP11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 UFC1Q9Y3C8 167 aa11.84□□□□□ -0.51
CHCHD3-204ENST00000457942 IGHV3-21A0A0B4J1V1 117 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 TEX50A0A1B0GTY4 177 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 TGOLN2O43493 480 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 NOL3O60936 208 aaKnown RBP11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 PTBP1P26599 531 aaKnown RBP eCLIP11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 G6PCP35575 357 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 KLK9Q2XQG4 91 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 ANKRD55Q3KP44 614 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 ZNF585BQ52M93 769 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 PHLDA2Q53GA4 152 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 MZT2AQ6P582 158 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 DHRS11Q6UWP2 260 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 UNQ9165/PRO28630Q6UXU0 137 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 RAB2BQ8WUD1 216 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 FCAMRQ8WWV6 532 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 LSM10Q969L4 123 aaKnown RBP11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 MARC2Q969Z3 335 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 KLK9Q9UKQ9 250 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 ANAPC10Q9UM13 185 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 NSG2Q9Y328 171 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 OR51B2Q9Y5P1 312 aa11.83□□□□□ -0.52
CHCHD3-204ENST00000457942 CCDC160A6NGH7 325 aa11.82□□□□□ -0.52
CHCHD3-204ENST00000457942 OR2T8A6NH00 312 aa11.82□□□□□ -0.52
CHCHD3-204ENST00000457942 APOA1P02647 267 aa11.82□□□□□ -0.52
CHCHD3-204ENST00000457942 SERPINE2P07093 398 aa11.82□□□□□ -0.52
CHCHD3-204ENST00000457942 FGF2P09038 288 aa11.82□□□□□ -0.52
CHCHD3-204ENST00000457942 WT1-ASQ06250 92 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms