RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 TMEM196Q5HYL7 178 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 UTF1Q5T230 341 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 TMUB1Q9BVT8 246 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 MED29Q9NX70 200 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 ASPDHA6ND91 283 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 NDUFB4O95168 129 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 MNX1P50219 401 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-204ENST00000455883 EMDP50402 254 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 C2orf83Q53S99 150 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 SBK3P0C264 359 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 NHP2Q9NX24 153 aaKnown RBP4.47□□□□□ -1.69
CSMD3-204ENST00000455883 PRSS2P07478 247 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 CLEC2AQ6UVW9 174 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 HEPN1Q6WQI6 88 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 TMEM91Q6ZNR0 172 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 TMEM144Q7Z5S9 345 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 SPATA25Q9BR10 227 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 KCNE3Q9Y6H6 103 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 RPRMLQ8N4K4 120 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 OR5P3Q8WZ94 311 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 PARP12Q9H0J9 701 aaKnown RBP4.47□□□□□ -1.69
CSMD3-204ENST00000455883 PRO1933Q9H354 126 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 NPIPB11E5RHQ5 1161 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 CENPWQ5EE01 88 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 PYY3Q5JQD4 70 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 DYNLRB2Q8TF09 96 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 NKX2-6A6NCS4 301 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 FGF16O43320 207 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 DUTP33316 252 aaKnown RBP4.47□□□□□ -1.69
CSMD3-204ENST00000455883 RAE1P78406 368 aaKnown RBP4.47□□□□□ -1.69
CSMD3-204ENST00000455883 IFITM3Q01628 133 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 TSKUQ8WUA8 353 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 WNT2BQ93097 391 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 IL18BPO95998 194 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 IGFBP3P17936 291 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-204ENST00000455883 DDB2Q92466 427 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 EEF1AKMT3Q96AZ1 226 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 IGHG4P01861 327 aa4.46□□□□□ -1.69
CSMD3-204ENST00000455883 LIFP15018 202 aa4.46□□□□□ -1.69
CSMD3-204ENST00000455883 MPV17P39210 176 aa4.46□□□□□ -1.69
CSMD3-204ENST00000455883 FAM27D1Q5T7N8 215 aa4.46□□□□□ -1.69
CSMD3-204ENST00000455883 TMEM126AQ9H061 195 aa4.46□□□□□ -1.69
CSMD3-204ENST00000455883 CCL27Q9Y4X3 112 aa4.46□□□□□ -1.69
CSMD3-204ENST00000455883 OR2H2O95918 312 aa4.46□□□□□ -1.69
CSMD3-204ENST00000455883 KCNK17Q96T54 332 aa4.46□□□□□ -1.69
CSMD3-204ENST00000455883 PRR33A8MZF0 331 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 CDC42EP2O14613 210 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 HIST1H2BKO60814 126 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 HIST1H2BJP06899 126 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 ESDP10768 282 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 HIST1H2BOP23527 126 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 HIST1H2BBP33778 126 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 HIST1H2BDP58876 126 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 HIST1H2BCP62807 126 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 HIST2H2BEQ16778 126 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-204ENST00000455883 LRRC29Q8WV35 223 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 HIST1H2BHQ93079 126 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 RELTQ969Z4 430 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 HIST1H2BNQ99877 126 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 HIST1H2BMQ99879 126 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 ANKRD10Q9NXR5 420 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 IGHV1-24A0A0C4DH33 117 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 A0A0G2JMM0 328 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 A0A1W2PPB8 328 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 KIR3DP1A8MWS1 328 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 PI3P19957 117 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 NUP37Q8NFH4 326 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 PEX7O00628 323 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF774Q6NX45 483 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 LHFPL4Q7Z7J7 247 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 RNF167Q9H6Y7 350 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 LOXL2Q9Y4K0 774 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 IL15RAQ13261 267 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 TSPO2Q5TGU0 170 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 OTORQ9NRC9 128 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 CCL1P22362 96 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 ANOS1P23352 680 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 GNB2P62879 340 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 DEFB133Q30KQ1 61 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 MRPL14Q6P1L8 145 aaKnown RBP4.46□□□□□ -1.7
CSMD3-204ENST00000455883 HMGN2P46Q86SG4 172 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 DOK4Q8TEW6 326 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 EMC6Q9BV81 110 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 PDE6GP18545 87 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 CCL14Q16627 93 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 SPSB3Q6PJ21 355 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 LYPD8Q6UX82 237 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 SHISA4Q96DD7 197 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 GDF15Q99988 308 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 TRBV6-6A0A0A6YYG2 114 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 TMEM14DPA8MWL7 114 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 CD5LO43866 347 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 FAM159AQ6UWV7 190 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 R3HDMLQ9H3Y0 253 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 TRGV8A0A0C4DH27 118 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 IL6RP08887 468 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-204ENST00000455883 CLDN2P57739 230 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 ZP1P60852 638 aa4.46□□□□□ -1.7
CSMD3-204ENST00000455883 RPL32P62910 135 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms