RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 RPL36Q9Y3U8 105 aaKnown RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 V9GYY9 64 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 MRC1P22897 1456 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 DEPDC5O75140 1603 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 MYO3AQ8NEV4 1616 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 CICQ96RK0 1608 aaPredicted RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 SIGLEC1Q9BZZ2 1709 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 AFDNP55196 1824 aaKnown RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 SCN1AP35498 2009 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 TRAV36DV7A0A075B6V5 113 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 hCG_1818297A0A087WSY0 165 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 IGKV1D-8A0A087WSZ0 117 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 NSG1A0A0A6YYJ2 146 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 BORCS7-ASMTA0A0B4J1R7 106 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 KBTBD11-OT1A0A1B0GTJ5 212 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 SMIM28A0A1B0GU29 152 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 TINCRA0A1B0GVN0 87 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 A0A1B0GX51 115 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 hADV38S2A0JD32 116 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 MROH2AA6NES4 1674 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 CD300LBA8K4G0 201 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 CCDC179H3BU77 68 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 PLPP3O14495 311 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 CDX4O14627 284 aaPredicted RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 TAAR5O14804 337 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF354AO60765 605 aaPredicted RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 NPIPB7O75200 414 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 GCM2O75603 506 aaPredicted RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 FCN3O75636 299 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 KBTBD11O94819 623 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 SOX14O95416 240 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 SFT2D2O95562 160 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 MOSP00540 346 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 HRASP01112 189 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 KRASP01116 189 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 HLA-AP01891 365 aaKnown RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 HLA-DQB2P05538 268 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 DBIP07108 87 aaKnown RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 CRYGDP07320 174 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 SPINK8P0C7L1 97 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 RGPD1P0DJD0 1748 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 CT45A6P0DMU7 189 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 CT45A5P0DMU8 189 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 CT45A7P0DMV0 189 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 CD99P14209 185 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 IGLL1P15814 213 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 RPL7P18124 248 aaKnown RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 NTF3P20783 257 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 EVI2AP22794 236 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 HTR1DP28221 377 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 PTPRMP28827 1452 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 SRIP30626 198 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 HRH1P35367 487 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 NSG1P42857 185 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 KIR2DS2P43631 304 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 GPR1P46091 355 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 CXCL12P48061 93 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 NUP153P49790 1475 aaKnown RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 DLX6P56179 175 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF121P58317 390 aaPredicted RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 TPPP2P59282 170 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 TAS2R31P59538 309 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 RAB10P61026 200 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 SNRPGP62308 76 aaKnown RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 RPS28P62857 69 aaKnown RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 GRB2P62993 217 aaKnown RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF92Q03936 586 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 PSG7Q13046 419 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 OR7A5Q15622 319 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 LRRC75BQ2VPJ9 315 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 SLC25A35Q3KQZ1 300 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 LINC00303Q3SY05 128 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 TMEM97Q5BJF2 176 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 CT45A1Q5HYN5 189 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 PAGE3Q5JUK9 113 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 ACTL10Q5JWF8 245 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 UBE2NLQ5JXB2 153 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 BVES-AS1Q5T3Y7 98 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF684Q5T5D7 378 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 TMEM215Q68D42 235 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 ZFAND6Q6FIF0 208 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 OPN5Q6U736 354 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 DPPA3Q6W0C5 159 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 MOB1BQ7L9L4 216 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 NRKQ7Z2Y5 1582 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 FAM19A5Q7Z5A7 132 aaPredicted RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF101Q8IZC7 436 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 CD177Q8N6Q3 437 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 ANKRD31Q8N7Z5 1873 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 ZDHHC22Q8N966 263 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 Q8N976 141 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 ZIC4Q8N9L1 334 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 TNRC6AQ8NDV7 1962 aaKnown RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 COL22A1Q8NFW1 1626 aaPredicted RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 OR8B12Q8NGG6 310 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 OR52E2Q8NGJ4 325 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 OR6N2Q8NGY6 317 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 OR2G3Q8NGZ4 309 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 ZNRF2Q8NHG8 242 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 CT45A3Q8NHU0 189 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms