RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 OR13C8Q8NGS7 320 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 MARCH1Q8TCQ1 289 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 SEC22AQ96IW7 307 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 FBXL7Q9UJT9 491 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 KLK9Q9UKQ9 250 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 TEX50A0A1B0GTY4 177 aa12.48□□□□□ -0.41
SMPD4-214ENST00000455548 CYB5BO43169 146 aa12.48□□□□□ -0.41
SMPD4-214ENST00000455548 B3GALNT1O75752 331 aa12.48□□□□□ -0.41
SMPD4-214ENST00000455548 REG1AP05451 166 aa12.48□□□□□ -0.41
SMPD4-214ENST00000455548 CTSDP07339 412 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-214ENST00000455548 KLF5Q13887 457 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-214ENST00000455548 SURF2Q15527 256 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-214ENST00000455548 TATDN3Q17R31 274 aa12.48□□□□□ -0.41
SMPD4-214ENST00000455548 H2BFWTQ7Z2G1 175 aa12.48□□□□□ -0.41
SMPD4-214ENST00000455548 FANCD2OSQ96PS1 177 aa12.48□□□□□ -0.41
SMPD4-214ENST00000455548 PRRT1Q99946 306 aa12.48□□□□□ -0.41
SMPD4-214ENST00000455548 NDUFA4L2Q9NRX3 87 aa12.48□□□□□ -0.41
SMPD4-214ENST00000455548 C14orf166Q9Y224 244 aaKnown RBP12.48□□□□□ -0.41
SMPD4-214ENST00000455548 OR51B2Q9Y5P1 312 aa12.48□□□□□ -0.41
SMPD4-214ENST00000455548 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.47□□□□□ -0.41
SMPD4-214ENST00000455548 C3orf85A0A1B0GTC6 90 aa12.47□□□□□ -0.41
SMPD4-214ENST00000455548 C15orf61A6NNL5 157 aa12.47□□□□□ -0.41
SMPD4-214ENST00000455548 ATG12O94817 140 aa12.47□□□□□ -0.41
SMPD4-214ENST00000455548 IGKV1-39P01597 117 aa12.47□□□□□ -0.41
SMPD4-214ENST00000455548 IGKV1D-39P04432 117 aa12.47□□□□□ -0.41
SMPD4-214ENST00000455548 RPEL1Q2QD12 228 aa12.47□□□□□ -0.41
SMPD4-214ENST00000455548 FAAP20Q6NZ36 180 aa12.47□□□□□ -0.41
SMPD4-214ENST00000455548 C19orf35Q6ZS72 473 aa12.47□□□□□ -0.41
SMPD4-214ENST00000455548 OR5B3Q8NH48 314 aa12.47□□□□□ -0.41
SMPD4-214ENST00000455548 MRGPRFQ96AM1 343 aa12.47□□□□□ -0.41
SMPD4-214ENST00000455548 OR4C12Q96R67 309 aa12.47□□□□□ -0.41
SMPD4-214ENST00000455548 HINT2Q9BX68 163 aa12.47□□□□□ -0.41
SMPD4-214ENST00000455548 TMEM14BQ9NUH8 114 aa12.47□□□□□ -0.41
SMPD4-214ENST00000455548 NSG2Q9Y328 171 aa12.47□□□□□ -0.41
SMPD4-214ENST00000455548 TRBV12-3P01733 135 aa12.46□□□□□ -0.41
SMPD4-214ENST00000455548 PYDC2Q56P42 97 aa12.46□□□□□ -0.41
SMPD4-214ENST00000455548 DEFB121Q5J5C9 76 aa12.46□□□□□ -0.41
SMPD4-214ENST00000455548 GDPD1Q8N9F7 314 aa12.46□□□□□ -0.41
SMPD4-214ENST00000455548 OR10W1Q8NGF6 305 aa12.46□□□□□ -0.41
SMPD4-214ENST00000455548 OR6Q1Q8NGQ2 317 aa12.46□□□□□ -0.41
SMPD4-214ENST00000455548 OR4A16Q8NH70 328 aa12.46□□□□□ -0.41
SMPD4-214ENST00000455548 LSM10Q969L4 123 aaKnown RBP12.46□□□□□ -0.41
SMPD4-214ENST00000455548 TMEM56Q96MV1 263 aa12.46□□□□□ -0.41
SMPD4-214ENST00000455548 TP53RKQ96S44 253 aa12.46□□□□□ -0.41
SMPD4-214ENST00000455548 THAP7Q9BT49 309 aaPredicted RBP12.46□□□□□ -0.41
SMPD4-214ENST00000455548 SLC2A8Q9NY64 477 aa12.46□□□□□ -0.41
SMPD4-214ENST00000455548 THYN1Q9P016 225 aa12.46□□□□□ -0.41
SMPD4-214ENST00000455548 SCP2D1Q9UJQ7 156 aa12.46□□□□□ -0.41
SMPD4-214ENST00000455548 IGLV11-55A0A075B6I3 123 aa12.45□□□□□ -0.42
SMPD4-214ENST00000455548 BMPR1BO00238 502 aa12.45□□□□□ -0.42
SMPD4-214ENST00000455548 NDUFB8O95169 186 aa12.45□□□□□ -0.42
SMPD4-214ENST00000455548 OR13C7P0DN81 318 aa12.45□□□□□ -0.42
SMPD4-214ENST00000455548 SYNJ2BPP57105 145 aa12.45□□□□□ -0.42
SMPD4-214ENST00000455548 AP3S2P59780 193 aa12.45□□□□□ -0.42
SMPD4-214ENST00000455548 OR51S1Q8NGJ8 323 aa12.45□□□□□ -0.42
SMPD4-214ENST00000455548 EEF1AKMT3Q96AZ1 226 aa12.45□□□□□ -0.42
SMPD4-214ENST00000455548 CXorf58Q96LI9 332 aa12.45□□□□□ -0.42
SMPD4-214ENST00000455548 NDUFA13Q9P0J0 144 aa12.45□□□□□ -0.42
SMPD4-214ENST00000455548 ZNF256Q9Y2P7 627 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-214ENST00000455548 TRBV7-1A0A0A6YYK4 115 aa12.44□□□□□ -0.42
SMPD4-214ENST00000455548 LY86O95711 162 aa12.44□□□□□ -0.42
SMPD4-214ENST00000455548 UCP1P25874 307 aa12.44□□□□□ -0.42
SMPD4-214ENST00000455548 FAUP35544 74 aaKnown RBP12.44□□□□□ -0.42
SMPD4-214ENST00000455548 AKR1C2P52895 323 aa12.44□□□□□ -0.42
SMPD4-214ENST00000455548 WT1-ASQ06250 92 aa12.44□□□□□ -0.42
SMPD4-214ENST00000455548 TRIM16LQ309B1 348 aa12.44□□□□□ -0.42
SMPD4-214ENST00000455548 SPANXN2Q5MJ10 180 aa12.44□□□□□ -0.42
SMPD4-214ENST00000455548 CCDC190Q86UF4 302 aa12.44□□□□□ -0.42
SMPD4-214ENST00000455548 Q8N402 240 aa12.44□□□□□ -0.42
SMPD4-214ENST00000455548 OR9G4Q8NGQ1 327 aa12.44□□□□□ -0.42
SMPD4-214ENST00000455548 SCGB3A2Q96PL1 93 aa12.44□□□□□ -0.42
SMPD4-214ENST00000455548 PRR25Q96S07 402 aa12.44□□□□□ -0.42
SMPD4-214ENST00000455548 RTBDNQ9BSG5 229 aaPredicted RBP12.44□□□□□ -0.42
SMPD4-214ENST00000455548 GPR132Q9UNW8 380 aa12.44□□□□□ -0.42
SMPD4-214ENST00000455548 V9GYH0 126 aa12.44□□□□□ -0.42
SMPD4-214ENST00000455548 TEX13DA0A0J9YY54 714 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-214ENST00000455548 GGCTO75223 188 aaKnown RBP12.43□□□□□ -0.42
SMPD4-214ENST00000455548 MECP2P51608 486 aaKnown RBP12.43□□□□□ -0.42
SMPD4-214ENST00000455548 OR1L6Q8NGR2 347 aa12.43□□□□□ -0.42
SMPD4-214ENST00000455548 TMEM222Q9H0R3 208 aa12.43□□□□□ -0.42
SMPD4-214ENST00000455548 MCUBQ9NWR8 336 aa12.43□□□□□ -0.42
SMPD4-214ENST00000455548 PEMTQ9UBM1 199 aa12.43□□□□□ -0.42
SMPD4-214ENST00000455548 F11RQ9Y624 299 aaKnown RBP12.43□□□□□ -0.42
SMPD4-214ENST00000455548 DBX1A6NMT0 343 aa12.42□□□□□ -0.42
SMPD4-214ENST00000455548 IGKV1-5P01602 117 aa12.42□□□□□ -0.42
SMPD4-214ENST00000455548 P0C879 139 aa12.42□□□□□ -0.42
SMPD4-214ENST00000455548 ARL3P36405 182 aa12.42□□□□□ -0.42
SMPD4-214ENST00000455548 ETV6P41212 452 aa12.42□□□□□ -0.42
SMPD4-214ENST00000455548 HSPE1P61604 102 aaKnown RBP12.42□□□□□ -0.42
SMPD4-214ENST00000455548 SP6Q3SY56 376 aa12.42□□□□□ -0.42
SMPD4-214ENST00000455548 SLC25A24Q6NUK1 477 aa12.42□□□□□ -0.42
SMPD4-214ENST00000455548 DEDD2Q8WXF8 326 aa12.42□□□□□ -0.42
SMPD4-214ENST00000455548 TRIM63Q969Q1 353 aa12.42□□□□□ -0.42
SMPD4-214ENST00000455548 RRNAD1Q96FB5 475 aaKnown RBP12.42□□□□□ -0.42
SMPD4-214ENST00000455548 CCDC140Q96MF4 163 aa12.42□□□□□ -0.42
SMPD4-214ENST00000455548 C5orf66Q9H5L9 145 aa12.42□□□□□ -0.42
SMPD4-214ENST00000455548 NAA60Q9H7X0 242 aa12.42□□□□□ -0.42
SMPD4-214ENST00000455548 SIGLEC8Q9NYZ4 499 aa12.42□□□□□ -0.42
SMPD4-214ENST00000455548 MFSD2BA6NFX1 497 aa12.41□□□□□ -0.42
SMPD4-214ENST00000455548 CRYM-AS1A6NIL9 109 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms