RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 SECTM1Q8WVN6 248 aa13.74□□□□□ -0.21
MSH6-206ENST00000455383 ZNF414Q96IQ9 312 aa13.74□□□□□ -0.21
MSH6-206ENST00000455383 QTRT1Q9BXR0 403 aaKnown RBP13.74□□□□□ -0.21
MSH6-206ENST00000455383 NOTOA8MTQ0 251 aa13.73□□□□□ -0.21
MSH6-206ENST00000455383 SULT1C2O00338 296 aa13.73□□□□□ -0.21
MSH6-206ENST00000455383 SERPINE2P07093 398 aa13.73□□□□□ -0.21
MSH6-206ENST00000455383 CTSDP07339 412 aaPredicted RBP13.73□□□□□ -0.21
MSH6-206ENST00000455383 FCGR2CP31995 323 aa13.73□□□□□ -0.21
MSH6-206ENST00000455383 ADMP35318 185 aa13.73□□□□□ -0.21
MSH6-206ENST00000455383 WT1-ASQ06250 92 aa13.73□□□□□ -0.21
MSH6-206ENST00000455383 C22orf42Q6IC83 251 aa13.73□□□□□ -0.21
MSH6-206ENST00000455383 HSD17B13Q7Z5P4 300 aaPredicted RBP13.73□□□□□ -0.21
MSH6-206ENST00000455383 GATAD1Q8WUU5 269 aa13.73□□□□□ -0.21
MSH6-206ENST00000455383 NRG4Q8WWG1 115 aa13.73□□□□□ -0.21
MSH6-206ENST00000455383 CHRDL1Q9BU40 450 aa13.73□□□□□ -0.21
MSH6-206ENST00000455383 C11orf68Q9H3H3 251 aaKnown RBP13.73□□□□□ -0.21
MSH6-206ENST00000455383 TMEM140Q9NV12 185 aa13.73□□□□□ -0.21
MSH6-206ENST00000455383 FAT2Q9NYQ8 4349 aa13.72□□□□□ -0.21
MSH6-206ENST00000455383 SMIM30A4D0T7 59 aa13.72□□□□□ -0.21
MSH6-206ENST00000455383 CYB5BO43169 146 aa13.72□□□□□ -0.21
MSH6-206ENST00000455383 PPYP01298 95 aa13.72□□□□□ -0.21
MSH6-206ENST00000455383 MFAP2P55001 183 aa13.72□□□□□ -0.21
MSH6-206ENST00000455383 PRR20EP86478 221 aa13.72□□□□□ -0.21
MSH6-206ENST00000455383 PRR20CP86479 221 aa13.72□□□□□ -0.21
MSH6-206ENST00000455383 PRR20DP86480 221 aa13.72□□□□□ -0.21
MSH6-206ENST00000455383 PRR20BP86481 221 aa13.72□□□□□ -0.21
MSH6-206ENST00000455383 PRR20AP86496 221 aa13.72□□□□□ -0.21
MSH6-206ENST00000455383 OR5B3Q8NH48 314 aa13.72□□□□□ -0.21
MSH6-206ENST00000455383 CSTL1Q9H114 145 aa13.72□□□□□ -0.21
MSH6-206ENST00000455383 PLEKHA2Q9HB19 425 aa13.72□□□□□ -0.21
MSH6-206ENST00000455383 C15orf62A8K5M9 175 aa13.71□□□□□ -0.21
MSH6-206ENST00000455383 OR13C7P0DN81 318 aa13.71□□□□□ -0.21
MSH6-206ENST00000455383 PTHLHP12272 177 aa13.71□□□□□ -0.21
MSH6-206ENST00000455383 CATR1Q13166 79 aa13.71□□□□□ -0.21
MSH6-206ENST00000455383 APRG1Q8IVJ8 170 aa13.71□□□□□ -0.21
MSH6-206ENST00000455383 BEST4Q8NFU0 473 aa13.71□□□□□ -0.21
MSH6-206ENST00000455383 CD300LFQ8TDQ1 290 aa13.71□□□□□ -0.21
MSH6-206ENST00000455383 SCARB1Q8WTV0 552 aa13.71□□□□□ -0.21
MSH6-206ENST00000455383 C20orf24Q9BUV8 137 aa13.71□□□□□ -0.21
MSH6-206ENST00000455383 C6orf62Q9GZU0 229 aaPredicted RBP13.71□□□□□ -0.21
MSH6-206ENST00000455383 MFFQ9GZY8 342 aa13.71□□□□□ -0.21
MSH6-206ENST00000455383 C21orf62Q9NYP8 219 aa13.71□□□□□ -0.21
MSH6-206ENST00000455383 SMPXQ9UHP9 88 aa13.71□□□□□ -0.21
MSH6-206ENST00000455383 DYNC1H1Q14204 4646 aaKnown RBP13.7□□□□□ -0.22
MSH6-206ENST00000455383 DNAH2Q9P225 4427 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 TEX50A0A1B0GTY4 177 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 MPTX1A8MV57 137 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 TRAPPC2P0DI81 140 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 TRAPPC2BP0DI82 140 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 ARPC4P59998 168 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 NANOS2P60321 138 aaKnown RBP13.7□□□□□ -0.22
MSH6-206ENST00000455383 ZNF124Q15973 351 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 SLC25A24Q6NUK1 477 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 HOGA1Q86XE5 327 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 GVQW1Q8N7I0 195 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 C11orf45Q8TAV5 145 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 RARRES2Q99969 163 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 SLC5A7Q9GZV3 580 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 NDUFA4L2Q9NRX3 87 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 COMMD9Q9P000 198 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 ETV7Q9Y603 341 aa13.7□□□□□ -0.22
MSH6-206ENST00000455383 F11RQ9Y624 299 aaKnown RBP13.7□□□□□ -0.22
MSH6-206ENST00000455383 RYR1P21817 5038 aa13.69□□□□□ -0.22
MSH6-206ENST00000455383 K7EIM0 57 aa13.69□□□□□ -0.22
MSH6-206ENST00000455383 FGF9P31371 208 aaPredicted RBP13.69□□□□□ -0.22
MSH6-206ENST00000455383 CMC4P56277 68 aaPredicted RBP13.69□□□□□ -0.22
MSH6-206ENST00000455383 TCTAP57738 103 aa13.69□□□□□ -0.22
MSH6-206ENST00000455383 ZNF818PQ6ZRF7 136 aa13.69□□□□□ -0.22
MSH6-206ENST00000455383 CADM3Q8N126 398 aa13.69□□□□□ -0.22
MSH6-206ENST00000455383 DMBX1Q8NFW5 382 aa13.69□□□□□ -0.22
MSH6-206ENST00000455383 RNF2Q99496 336 aa13.69□□□□□ -0.22
MSH6-206ENST00000455383 DNAH17Q9UFH2 4485 aa13.69□□□□□ -0.22
MSH6-206ENST00000455383 IGHV3OR16-8A0A075B7F1 116 aa13.68□□□□□ -0.22
MSH6-206ENST00000455383 CHEK1O14757 476 aa13.68□□□□□ -0.22
MSH6-206ENST00000455383 ZNF207O43670 478 aaKnown RBP13.68□□□□□ -0.22
MSH6-206ENST00000455383 CTSGP08311 255 aa13.68□□□□□ -0.22
MSH6-206ENST00000455383 RBMS2Q15434 407 aaKnown RBP13.68□□□□□ -0.22
MSH6-206ENST00000455383 FAM90A2PQ658T7 463 aa13.68□□□□□ -0.22
MSH6-206ENST00000455383 TPRA1Q86W33 373 aa13.68□□□□□ -0.22
MSH6-206ENST00000455383 OR1L8Q8NGR8 309 aa13.68□□□□□ -0.22
MSH6-206ENST00000455383 LGALS14Q8TCE9 139 aa13.68□□□□□ -0.22
MSH6-206ENST00000455383 GIMAP1Q8WWP7 306 aa13.68□□□□□ -0.22
MSH6-206ENST00000455383 TXNL4BQ9NX01 149 aaKnown RBP13.68□□□□□ -0.22
MSH6-206ENST00000455383 RHBDL2Q9NX52 303 aa13.68□□□□□ -0.22
MSH6-206ENST00000455383 DAPK2Q9UIK4 370 aa13.68□□□□□ -0.22
MSH6-206ENST00000455383 IGHV3-21A0A0B4J1V1 117 aa13.67□□□□□ -0.22
MSH6-206ENST00000455383 IGHV7-4-1A0A0J9YVY3 117 aa13.67□□□□□ -0.22
MSH6-206ENST00000455383 IFNA4P05014 189 aa13.67□□□□□ -0.22
MSH6-206ENST00000455383 SFXN4Q6P4A7 337 aa13.67□□□□□ -0.22
MSH6-206ENST00000455383 OR11H2Q8NH07 326 aa13.67□□□□□ -0.22
MSH6-206ENST00000455383 OR51H1Q8NH63 302 aa13.67□□□□□ -0.22
MSH6-206ENST00000455383 C2CD4CQ8TF44 421 aa13.67□□□□□ -0.22
MSH6-206ENST00000455383 LSM10Q969L4 123 aaKnown RBP13.67□□□□□ -0.22
MSH6-206ENST00000455383 OR10C1Q96KK4 312 aa13.67□□□□□ -0.22
MSH6-206ENST00000455383 RHPN1-AS1Q9BWJ2 59 aa13.67□□□□□ -0.22
MSH6-206ENST00000455383 FBXL17Q9UF56 701 aa13.67□□□□□ -0.22
MSH6-206ENST00000455383 SCAND1P57086 179 aa13.66□□□□□ -0.22
MSH6-206ENST00000455383 FXYD4P59646 89 aa13.66□□□□□ -0.22
MSH6-206ENST00000455383 AADACL3Q5VUY0 350 aa13.66□□□□□ -0.22
MSH6-206ENST00000455383 TMEM116Q8NCL8 245 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms