RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 ZNF502Q8TBZ5 544 aa9.11□□□□□ -0.95
USP40-210ENST00000454354 NDUFA4L2Q9NRX3 87 aa9.11□□□□□ -0.95
USP40-210ENST00000454354 TECRQ9NZ01 308 aaKnown RBP9.11□□□□□ -0.95
USP40-210ENST00000454354 THYN1Q9P016 225 aa9.11□□□□□ -0.95
USP40-210ENST00000454354 S4R3C0 116 aa9.11□□□□□ -0.95
USP40-210ENST00000454354 DYNC2H1Q8NCM8 4307 aaKnown RBP9.1□□□□□ -0.95
USP40-210ENST00000454354 FAM25AB3EWG3 89 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 FAM25CB3EWG5 89 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 FAM25GB3EWG6 89 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 KRASP01116 189 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 SERPINE2P07093 398 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 FOLR2P14207 255 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 EDN2P20800 178 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 S100GP29377 79 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 G6PCP35575 357 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 DEFB114Q30KQ6 69 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 CD300EQ496F6 205 aaPredicted RBP9.1□□□□□ -0.95
USP40-210ENST00000454354 PHLDA2Q53GA4 152 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 GPR141Q7Z602 305 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 TBC1D26Q86UD7 250 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 LHFPL1Q86WI0 220 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 OR5B3Q8NH48 314 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 VN1R17PQ8TDU5 208 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 C15orf40Q8WUR7 153 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 LSM10Q969L4 123 aaKnown RBP9.1□□□□□ -0.95
USP40-210ENST00000454354 ZNF486Q96H40 463 aaPredicted RBP9.1□□□□□ -0.95
USP40-210ENST00000454354 SEC22AQ96IW7 307 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 TSC22D3Q99576 134 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 ZMAT4Q9H898 229 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 TMEM14BQ9NUH8 114 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 EXTL2Q9UBQ6 330 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 PRNDQ9UKY0 176 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 OR51B2Q9Y5P1 312 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 F11RQ9Y624 299 aaKnown RBP9.1□□□□□ -0.95
USP40-210ENST00000454354 LYSTQ99698 3801 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 STARD9Q9P2P6 4700 aa9.1□□□□□ -0.95
USP40-210ENST00000454354 TMEM213A2RRL7 107 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 C15orf61A6NNL5 157 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 ZNF785A8K8V0 405 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 C3orf84H3BNL1 204 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 M0QYG6 137 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 CYB5BO43169 146 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 IGKV1-39P01597 117 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 IGKV1D-39P04432 117 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 OR13C7P0DN81 318 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 TBPP20226 339 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 RND3P61587 244 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 FAM106AQ4KMX7 169 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 ARRDC1Q8N5I2 433 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 OR52I2Q8NH67 350 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 DYNLRB2Q8TF09 96 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 ATP6V0BQ99437 205 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 FKBP11Q9NYL4 201 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 KLK11Q9UBX7 282 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 MTFP1Q9UDX5 166 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 NSG2Q9Y328 171 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 TENM2Q9NT68 2774 aa9.09□□□□□ -0.95
USP40-210ENST00000454354 DBX1A6NMT0 343 aa9.08□□□□□ -0.96
USP40-210ENST00000454354 SNAPC5O75971 98 aa9.08□□□□□ -0.96
USP40-210ENST00000454354 CD3DP04234 171 aa9.08□□□□□ -0.96
USP40-210ENST00000454354 CLEC3BP05452 202 aa9.08□□□□□ -0.96
USP40-210ENST00000454354 CBLN1P23435 193 aa9.08□□□□□ -0.96
USP40-210ENST00000454354 GPR183P32249 361 aa9.08□□□□□ -0.96
USP40-210ENST00000454354 MFAP2P55001 183 aa9.08□□□□□ -0.96
USP40-210ENST00000454354 CD81P60033 236 aa9.08□□□□□ -0.96
USP40-210ENST00000454354 RNASE10Q5GAN6 216 aaKnown RBP9.08□□□□□ -0.96
USP40-210ENST00000454354 TMEM56Q96MV1 263 aa9.08□□□□□ -0.96
USP40-210ENST00000454354 ABHD1Q96SE0 405 aa9.08□□□□□ -0.96
USP40-210ENST00000454354 ZNF436Q9C0F3 470 aaPredicted RBP9.08□□□□□ -0.96
USP40-210ENST00000454354 MIXL1Q9H2W2 232 aa9.08□□□□□ -0.96
USP40-210ENST00000454354 TGOLN2O43493 480 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 CD74P04233 296 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 IFNA6P05013 189 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 C8orf88P0DMB2 117 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 ELLP55199 621 aaPredicted RBP9.07□□□□□ -0.96
USP40-210ENST00000454354 MRPS10P82664 201 aaKnown RBP9.07□□□□□ -0.96
USP40-210ENST00000454354 SSBP1Q04837 148 aaKnown RBP9.07□□□□□ -0.96
USP40-210ENST00000454354 SPCS2Q15005 226 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 HAGHQ16775 308 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 RNASE12Q5GAN4 147 aaKnown RBP9.07□□□□□ -0.96
USP40-210ENST00000454354 UNQ9165/PRO28630Q6UXU0 137 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 LINC00322Q6ZN03 302 aaPredicted RBP9.07□□□□□ -0.96
USP40-210ENST00000454354 TMEM229BQ8NBD8 167 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 OR1L6Q8NGR2 347 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 CACNG8Q8WXS5 425 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 MARC2Q969Z3 335 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 BSCL2Q96G97 398 aaPredicted RBP9.07□□□□□ -0.96
USP40-210ENST00000454354 CITED4Q96RK1 184 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 BCL7BQ9BQE9 202 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 NEURL2Q9BR09 285 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 HINT2Q9BX68 163 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 PALMDQ9NP74 551 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 SLC2A8Q9NY64 477 aa9.07□□□□□ -0.96
USP40-210ENST00000454354 ZNF320A2RRD8 509 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 GABARAPH6UMI1 98 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 K7EIM0 57 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 P0C879 139 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 TAS2R19P59542 299 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 PRCDQ00LT1 54 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 ZNF57Q68EA5 555 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms