RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 EXOSC2Q13868 293 aaKnown RBP4.78□□□□□ -1.64
SDC4P-201ENST00000453285 HNF4GQ14541 408 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 BSXQ3C1V8 233 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 SPANXN5Q5MJ07 72 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 C10orf55Q5SWW7 151 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 RPL7L1Q6DKI1 246 aaKnown RBP4.78□□□□□ -1.64
SDC4P-201ENST00000453285 PPP1R27Q86WC6 154 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 MMD2Q8IY49 270 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 STPG2Q8N412 459 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 Q8N9W7 124 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 OR10W1Q8NGF6 305 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 OR8H1Q8NGG4 311 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 OR1L8Q8NGR8 309 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 STOML3Q8TAV4 291 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 ST8SIA2Q92186 375 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 ZNF471Q9BX82 626 aaPredicted RBP4.78□□□□□ -1.64
SDC4P-201ENST00000453285 SMIM3Q9BZL3 60 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 ZC4H2Q9NQZ6 224 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 PLA2G2EQ9NZK7 142 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 METTL1Q9UBP6 276 aaKnown RBP4.78□□□□□ -1.64
SDC4P-201ENST00000453285 NUP50Q9UKX7 468 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 AKAP9Q99996 3911 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 SVEP1Q4LDE5 3571 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 CSMD1Q96PZ7 3565 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 ZFHX3Q15911 3703 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 NOTCH2Q04721 2471 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 IGLC7A0M8Q6 106 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 TEX22C9J3V5 150 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 FAM106CPP0CH98 169 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 RNASE2P10153 161 aaKnown RBP4.77□□□□□ -1.65
SDC4P-201ENST00000453285 TMEM11P17152 192 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 RPL27AP46776 148 aaKnown RBP4.77□□□□□ -1.65
SDC4P-201ENST00000453285 COMPP49747 757 aaPredicted RBP4.77□□□□□ -1.65
SDC4P-201ENST00000453285 BPIFB3P59826 476 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 UBA52P62987 128 aaKnown RBP4.77□□□□□ -1.65
SDC4P-201ENST00000453285 WT1-ASQ06250 92 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 HES1Q14469 280 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 MMDQ15546 238 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 C5orf64Q2M2E5 130 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 PVRIGQ6DKI7 326 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 C9orf139Q6ZV77 190 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 ZNF767PQ75MW2 155 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 BAP18Q8IXM2 172 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 BCL6BQ8N143 479 aaPredicted RBP4.77□□□□□ -1.65
SDC4P-201ENST00000453285 TMEM217Q8N7C4 229 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 UBAC2Q8NBM4 344 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 OR1S2Q8NGQ3 325 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 OR5C1Q8NGR4 320 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 CLCC1Q96S66 551 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 GINS3Q9BRX5 216 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 COMMD5Q9GZQ3 224 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 HIPK2Q9H2X6 1198 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 PLEKHA3Q9HB20 300 aa4.77□□□□□ -1.65
SDC4P-201ENST00000453285 HEYLQ9NQ87 328 aaPredicted RBP4.77□□□□□ -1.65
SDC4P-201ENST00000453285 STRAPQ9Y3F4 350 aaKnown RBP4.77□□□□□ -1.65
SDC4P-201ENST00000453285 MDFIC2A0A1B0GVS7 189 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 A0A1W2PN81 502 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 A6NDX4 124 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 SMAD7O15105 426 aaKnown RBP4.76□□□□□ -1.65
SDC4P-201ENST00000453285 JTBO76095 146 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 CA2P00918 260 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 IFNA10P01566 189 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 AMY1AP04745 511 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 FBP1P09467 338 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 EGR2P11161 476 aaPredicted RBP4.76□□□□□ -1.65
SDC4P-201ENST00000453285 TPT1P13693 172 aaKnown RBP4.76□□□□□ -1.65
SDC4P-201ENST00000453285 MDKP21741 143 aaPredicted RBP4.76□□□□□ -1.65
SDC4P-201ENST00000453285 NPY1RP25929 384 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 CHRNA7P36544 502 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 HOXA1P49639 335 aaPredicted RBP4.76□□□□□ -1.65
SDC4P-201ENST00000453285 ATP5IP56385 69 aaPredicted RBP4.76□□□□□ -1.65
SDC4P-201ENST00000453285 SLC38A11Q08AI6 406 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 CLINT1Q14677 625 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 TNXAQ16473 311 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 AANATQ16613 207 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 ATP6V1FQ16864 119 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 VWC2Q2TAL6 325 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 TUSC1Q2TAM9 212 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 LRRC75BQ2VPJ9 315 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 DEFB112Q30KQ8 113 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 C2orf83Q53S99 150 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 OR8G2PQ6IF36 304 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 ALKAL2Q6UX46 152 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 ETV3LQ6ZN32 361 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 STX12Q86Y82 276 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 SLC24A4Q8NFF2 622 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 SCARB1Q8WTV0 552 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 SRSF12Q8WXF0 261 aaKnown RBP4.76□□□□□ -1.65
SDC4P-201ENST00000453285 PHYHIPLQ96FC7 376 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 RBM14Q96PK6 669 aaKnown RBP4.76□□□□□ -1.65
SDC4P-201ENST00000453285 ATP5SQ99766 215 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 SSX3Q99909 188 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 HINT2Q9BX68 163 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 PRDM13Q9H4Q3 707 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 ENY2Q9NPA8 101 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 KIAA1456Q9P272 454 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 ITGB1BP2Q9UKP3 347 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 RFNGQ9Y644 331 aa4.76□□□□□ -1.65
SDC4P-201ENST00000453285 BORCS7-ASMTA0A0B4J1R7 106 aa4.75□□□□□ -1.65
SDC4P-201ENST00000453285 IGHV7-81A0A0B4J1V7 117 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms