RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 R4GN57 208 aa11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 C21orf140B9A014 251 aa11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 DEFA4P12838 97 aa11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 CEACAM3P40198 252 aa11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 RNPS1Q15287 305 aaKnown RBP11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 OR1K1Q8NGR3 316 aa11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 SIGMAR1Q99720 223 aa11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 RPEL1Q2QD12 228 aa11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 ZNF439Q8NDP4 499 aa11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 SLC25A40Q8TBP6 338 aa11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 TAAR6Q96RI8 345 aa11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 J3QT63 122 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 MT-CO3P00414 261 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 MMD2Q8IY49 270 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 RDH5Q92781 318 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 NPVFQ9HCQ7 196 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 GPR179Q6PRD1 2367 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 C7orf71A4D174 169 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 MT-ND6P03923 174 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 NPY1RP25929 384 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 CKS1BP61024 79 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 PSG3Q16557 428 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 PRAMEF5Q5TYX0 476 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 PRAMEF6Q5VXH4 476 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 PPP1R3CQ9UQK1 317 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 C5orf49A4QMS7 147 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 FAM231BA6NCW3 169 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 HSPB6O14558 160 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 SLC25A34Q6PIV7 304 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 Q6ZRM9 215 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 ARL2-SNX15V9GYD0 113 aa11.23□□□□□ -0.61
SYNGAP1-204ENST00000449372 LINC00869P0C866 280 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 CYB561P49447 251 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 EBLN2Q6P2I7 272 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 AP1S3Q96PC3 154 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 COX19Q49B96 90 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 UFSP1Q6NVU6 142 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 IGKV1D-13A0A0B4J2D9 117 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 FAM181BA6NEQ2 426 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 IGKV1-13P0DP09 117 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 PLP1P60201 277 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 UBE2G1P62253 170 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 RAB31Q13636 194 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 COLCA1Q6ZS62 124 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 NEGR1Q7Z3B1 354 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 SCCPDHQ8NBX0 429 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 ST20Q9HBF5 79 aa11.22□□□□□ -0.61
SYNGAP1-204ENST00000449372 MPDU1O75352 247 aa11.21□□□□□ -0.61
SYNGAP1-204ENST00000449372 HSBP1O75506 76 aa11.21□□□□□ -0.61
SYNGAP1-204ENST00000449372 GABRA6Q16445 453 aa11.21□□□□□ -0.61
SYNGAP1-204ENST00000449372 WIPI1Q5MNZ9 446 aaPredicted RBP11.21□□□□□ -0.61
SYNGAP1-204ENST00000449372 SPINK14Q6IE38 97 aa11.21□□□□□ -0.61
SYNGAP1-204ENST00000449372 Q6ZPA2 131 aa11.21□□□□□ -0.61
SYNGAP1-204ENST00000449372 TMEM204Q9BSN7 226 aa11.21□□□□□ -0.61
SYNGAP1-204ENST00000449372 OR10J4P0C629 311 aa11.21□□□□□ -0.61
SYNGAP1-204ENST00000449372 WDR82Q6UXN9 313 aa11.21□□□□□ -0.61
SYNGAP1-204ENST00000449372 ZNF841Q6ZN19 808 aa11.21□□□□□ -0.61
SYNGAP1-204ENST00000449372 M0R2Z0 102 aa11.21□□□□□ -0.62
SYNGAP1-204ENST00000449372 PATE4P0C8F1 98 aa11.21□□□□□ -0.62
SYNGAP1-204ENST00000449372 SSTR5P35346 364 aa11.21□□□□□ -0.62
SYNGAP1-204ENST00000449372 TBR1Q16650 682 aa11.21□□□□□ -0.62
SYNGAP1-204ENST00000449372 CLEC3BP05452 202 aa11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 SLC35B1P78383 322 aa11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 PSG7Q13046 419 aa11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 H2BFWTQ7Z2G1 175 aa11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 OR8B3Q8NGG8 313 aa11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 OR8B2Q96RD0 313 aa11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 BMPR1BO00238 502 aa11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 TMEM136Q6ZRR5 245 aa11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 PIP4P1Q86T03 277 aa11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 RAB9BQ9NP90 201 aa11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 CRIM1Q9NZV1 1036 aa11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 THYN1Q9P016 225 aa11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 TMEM30CPA0ZSE6 113 aa11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 CEBPDP49716 269 aaPredicted RBP11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 DLL3Q9NYJ7 618 aa11.2□□□□□ -0.62
SYNGAP1-204ENST00000449372 A0A087X0K7 114 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 OR4C46A6NHA9 309 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 J3KRW8 73 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 TGFBR3Q03167 851 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 TNXAQ16473 311 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 DHRS13Q6UX07 377 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 BHLHA15Q7RTS1 189 aaPredicted RBP11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 PDLIM3Q53GG5 364 aaPredicted RBP11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 RNFT1Q5M7Z0 435 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 HES3Q5TGS1 186 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 TRAT1Q6PIZ9 186 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 GALMQ96C23 342 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 NCOR1O75376 2440 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 LOC400499M0QZD8 3231 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 K7EN84 100 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 MZT1Q08AG7 82 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 FAM222BQ8WU58 562 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 COMMD5Q9GZQ3 224 aa11.19□□□□□ -0.62
SYNGAP1-204ENST00000449372 IGKV3D-15A0A087WSY6 115 aa11.18□□□□□ -0.62
SYNGAP1-204ENST00000449372 SCO2A0A1W2PP80 73 aa11.18□□□□□ -0.62
SYNGAP1-204ENST00000449372 hDV102S1A0JD36 115 aa11.18□□□□□ -0.62
SYNGAP1-204ENST00000449372 ERVK-16P61578 105 aa11.18□□□□□ -0.62
SYNGAP1-204ENST00000449372 FAM173AQ9BQD7 235 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms