RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 OR52E5Q8NH55 327 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 DTD1Q8TEA8 209 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 ENY2Q9NPA8 101 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 PARP11Q9NR21 331 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 ZFP57Q9NU63 452 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 OR5AC2Q9NZP5 309 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 MBD2Q9UBB5 411 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 NF1P21359 2839 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 A0A1B0GW64 132 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 H3BP45 60 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 GPR137BO60478 399 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 MED6O75586 246 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 DEDDO75618 318 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 BLCAPP62952 87 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 FGL1Q08830 312 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 ZNF562Q6V9R5 426 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 THAP6Q8TBB0 222 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 NDUFA4L2Q9NRX3 87 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 CACFD1Q9UGQ2 172 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 FXYD6-FXYD2A0A087WZ82 144 aa11.58□□□□□ -0.56
TNF-208ENST00000449264 CGB1A6NKQ9 187 aa11.58□□□□□ -0.56
TNF-208ENST00000449264 H0YIZ8 118 aa11.58□□□□□ -0.56
TNF-208ENST00000449264 L7N2F9 121 aa11.58□□□□□ -0.56
TNF-208ENST00000449264 RLN2P04090 185 aa11.58□□□□□ -0.56
TNF-208ENST00000449264 PVALBP20472 110 aaPredicted RBP11.58□□□□□ -0.56
TNF-208ENST00000449264 VAMP2P63027 116 aa11.58□□□□□ -0.56
TNF-208ENST00000449264 DCUN1D4Q92564 292 aa11.58□□□□□ -0.56
TNF-208ENST00000449264 HEYLQ9NQ87 328 aaPredicted RBP11.58□□□□□ -0.56
TNF-208ENST00000449264 NIPBLQ6KC79 2804 aaeCLIP11.57□□□□□ -0.56
TNF-208ENST00000449264 MSGN1A6NI15 193 aa11.57□□□□□ -0.56
TNF-208ENST00000449264 ATP6V0E1O15342 81 aa11.57□□□□□ -0.56
TNF-208ENST00000449264 HILS1P60008 231 aa11.57□□□□□ -0.56
TNF-208ENST00000449264 PDLIM3Q53GG5 364 aaPredicted RBP11.57□□□□□ -0.56
TNF-208ENST00000449264 PRSS54Q6PEW0 395 aa11.57□□□□□ -0.56
TNF-208ENST00000449264 Q6ZS46 218 aa11.57□□□□□ -0.56
TNF-208ENST00000449264 NPFFR1Q9GZQ6 430 aa11.57□□□□□ -0.56
TNF-208ENST00000449264 FBXO7Q9Y3I1 522 aa11.57□□□□□ -0.56
TNF-208ENST00000449264 A0A1W2PN81 502 aa11.56□□□□□ -0.56
TNF-208ENST00000449264 LINC01548A6NM66 108 aa11.56□□□□□ -0.56
TNF-208ENST00000449264 TEX22C9J3V5 150 aa11.56□□□□□ -0.56
TNF-208ENST00000449264 TRIM77I1YAP6 450 aa11.56□□□□□ -0.56
TNF-208ENST00000449264 KCNAB3O43448 404 aa11.56□□□□□ -0.56
TNF-208ENST00000449264 REG1AP05451 166 aa11.56□□□□□ -0.56
TNF-208ENST00000449264 CHRNA7P36544 502 aa11.56□□□□□ -0.56
TNF-208ENST00000449264 ECSCRQ19T08 205 aa11.56□□□□□ -0.56
TNF-208ENST00000449264 ZFP69Q49AA0 526 aa11.56□□□□□ -0.56
TNF-208ENST00000449264 ARSJQ5FYB0 599 aaPredicted RBP11.56□□□□□ -0.56
TNF-208ENST00000449264 RAB40CQ96S21 281 aa11.56□□□□□ -0.56
TNF-208ENST00000449264 RNF126Q9BV68 326 aa11.56□□□□□ -0.56
TNF-208ENST00000449264 HIPK2Q9H2X6 1198 aa11.56□□□□□ -0.56
TNF-208ENST00000449264 PAIP2BQ9ULR5 123 aaKnown RBP11.56□□□□□ -0.56
TNF-208ENST00000449264 FAM181BA6NEQ2 426 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 E5RGE8 158 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 TMEM50AO95807 157 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 OR13C7P0DN81 318 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 AREGP15514 252 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 VDAC2P45880 294 aaPredicted RBP11.55□□□□□ -0.56
TNF-208ENST00000449264 CAV2P51636 162 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 WT1-ASQ06250 92 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 SLC35E3Q7Z769 313 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 OR11H4Q8NGC9 324 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 CIB3Q96Q77 187 aaPredicted RBP11.55□□□□□ -0.56
TNF-208ENST00000449264 PSENENQ9NZ42 101 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 JMJD1CQ15652 2540 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 IGLC7A0M8Q6 106 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 BOLA2-SMG1P6H3BVE0 249 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 CLDN34H7C241 214 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 C1QBP02746 253 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 RPL23AP62750 156 aaKnown RBP11.55□□□□□ -0.56
TNF-208ENST00000449264 UBA52P62987 128 aaKnown RBP11.55□□□□□ -0.56
TNF-208ENST00000449264 TMEM95Q3KNT9 176 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 SPANXN5Q5MJ07 72 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 MRPL41Q8IXM3 137 aaKnown RBP11.55□□□□□ -0.56
TNF-208ENST00000449264 LFNGQ8NES3 379 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 JMJD8Q96S16 334 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 LINC00527Q9UJ94 153 aa11.55□□□□□ -0.56
TNF-208ENST00000449264 ARPC5O15511 151 aa11.54□□□□□ -0.56
TNF-208ENST00000449264 TCF21O43680 179 aa11.54□□□□□ -0.56
TNF-208ENST00000449264 IFNA10P01566 189 aa11.54□□□□□ -0.56
TNF-208ENST00000449264 IGHG2P01859 326 aa11.54□□□□□ -0.56
TNF-208ENST00000449264 RNASE1P07998 156 aaKnown RBP11.54□□□□□ -0.56
TNF-208ENST00000449264 PAX9P55771 341 aa11.54□□□□□ -0.56
TNF-208ENST00000449264 ERHP84090 104 aaKnown RBP11.54□□□□□ -0.56
TNF-208ENST00000449264 TMEM267Q0VDI3 215 aaPredicted RBP11.54□□□□□ -0.56
TNF-208ENST00000449264 C19orf35Q6ZS72 473 aa11.54□□□□□ -0.56
TNF-208ENST00000449264 SLC24A4Q8NFF2 622 aa11.54□□□□□ -0.56
TNF-208ENST00000449264 SGMS2Q8NHU3 365 aa11.54□□□□□ -0.56
TNF-208ENST00000449264 TAF15Q92804 592 aaKnown RBP eCLIP11.54□□□□□ -0.56
TNF-208ENST00000449264 PRSS22Q9GZN4 317 aa11.54□□□□□ -0.56
TNF-208ENST00000449264 C11orf1Q9H5F2 150 aa11.54□□□□□ -0.56
TNF-208ENST00000449264 WSB1Q9Y6I7 421 aa11.54□□□□□ -0.56
TNF-208ENST00000449264 FAM24AA6NFZ4 105 aa11.53□□□□□ -0.56
TNF-208ENST00000449264 EGR2P11161 476 aaPredicted RBP11.53□□□□□ -0.56
TNF-208ENST00000449264 SLC25A4P12235 298 aa11.53□□□□□ -0.56
TNF-208ENST00000449264 SNCAP37840 140 aa11.53□□□□□ -0.56
TNF-208ENST00000449264 ASPHD1Q5U4P2 390 aa11.53□□□□□ -0.56
TNF-208ENST00000449264 UNQ5815/PRO19632Q6UWF5 114 aa11.53□□□□□ -0.56
TNF-208ENST00000449264 ZNF546Q86UE3 836 aa11.53□□□□□ -0.56
TNF-208ENST00000449264 OR2C3Q8N628 320 aa11.53□□□□□ -0.56
TNF-208ENST00000449264 SMIM8Q96KF7 97 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms