RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 FBXO7Q9Y3I1 522 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 PLXNB1O43157 2135 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 A0A1W2PN81 502 aa11.53□□□□□ -0.56
SHANK2-210ENST00000449116 MED6O75586 246 aa11.53□□□□□ -0.56
SHANK2-210ENST00000449116 CHRNA7P36544 502 aa11.53□□□□□ -0.56
SHANK2-210ENST00000449116 CRIP2P52943 208 aaPredicted RBP11.53□□□□□ -0.56
SHANK2-210ENST00000449116 SRSF4Q08170 494 aaKnown RBP11.53□□□□□ -0.56
SHANK2-210ENST00000449116 TMEM267Q0VDI3 215 aaPredicted RBP11.53□□□□□ -0.56
SHANK2-210ENST00000449116 IL15RAQ13261 267 aa11.53□□□□□ -0.56
SHANK2-210ENST00000449116 TMEM95Q3KNT9 176 aa11.53□□□□□ -0.56
SHANK2-210ENST00000449116 SPINK9Q5DT21 86 aa11.53□□□□□ -0.56
SHANK2-210ENST00000449116 HSD17B13Q7Z5P4 300 aaPredicted RBP11.53□□□□□ -0.56
SHANK2-210ENST00000449116 MRPL41Q8IXM3 137 aaKnown RBP11.53□□□□□ -0.56
SHANK2-210ENST00000449116 LFNGQ8NES3 379 aa11.53□□□□□ -0.56
SHANK2-210ENST00000449116 ASB13Q8WXK3 278 aa11.53□□□□□ -0.56
SHANK2-210ENST00000449116 TAF15Q92804 592 aaKnown RBP eCLIP11.53□□□□□ -0.56
SHANK2-210ENST00000449116 TMEM68Q96MH6 324 aa11.53□□□□□ -0.56
SHANK2-210ENST00000449116 C16orf95Q9H693 158 aa11.53□□□□□ -0.56
SHANK2-210ENST00000449116 ENY2Q9NPA8 101 aa11.53□□□□□ -0.56
SHANK2-210ENST00000449116 TRAV41A0A0B4J266 112 aa11.52□□□□□ -0.57
SHANK2-210ENST00000449116 CEBPZOSA8MTT3 80 aa11.52□□□□□ -0.57
SHANK2-210ENST00000449116 INS-IGF2F8WCM5 200 aa11.52□□□□□ -0.57
SHANK2-210ENST00000449116 MBPP02686 304 aaPredicted RBP11.52□□□□□ -0.57
SHANK2-210ENST00000449116 HOXA1P49639 335 aaPredicted RBP11.52□□□□□ -0.57
SHANK2-210ENST00000449116 ECSCRQ19T08 205 aa11.52□□□□□ -0.57
SHANK2-210ENST00000449116 AKIRIN2Q53H80 203 aa11.52□□□□□ -0.57
SHANK2-210ENST00000449116 ASPHD1Q5U4P2 390 aa11.52□□□□□ -0.57
SHANK2-210ENST00000449116 STPG2Q8N412 459 aa11.52□□□□□ -0.57
SHANK2-210ENST00000449116 OR10W1Q8NGF6 305 aa11.52□□□□□ -0.57
SHANK2-210ENST00000449116 NOL4LQ96MY1 436 aaPredicted RBP11.52□□□□□ -0.57
SHANK2-210ENST00000449116 MAGT1Q9H0U3 335 aa11.52□□□□□ -0.57
SHANK2-210ENST00000449116 RBKSQ9H477 322 aa11.52□□□□□ -0.57
SHANK2-210ENST00000449116 ZFP57Q9NU63 452 aa11.52□□□□□ -0.57
SHANK2-210ENST00000449116 LINC00527Q9UJ94 153 aa11.52□□□□□ -0.57
SHANK2-210ENST00000449116 JMJD1CQ15652 2540 aa11.52□□□□□ -0.57
SHANK2-210ENST00000449116 IGLC7A0M8Q6 106 aa11.51□□□□□ -0.57
SHANK2-210ENST00000449116 WRBO00258 174 aa11.51□□□□□ -0.57
SHANK2-210ENST00000449116 SYNGR2O43760 224 aa11.51□□□□□ -0.57
SHANK2-210ENST00000449116 GIPP09681 153 aaPredicted RBP11.51□□□□□ -0.57
SHANK2-210ENST00000449116 APELAP0DMC3 54 aa11.51□□□□□ -0.57
SHANK2-210ENST00000449116 HKR1P10072 659 aa11.51□□□□□ -0.57
SHANK2-210ENST00000449116 BCAP31P51572 246 aa11.51□□□□□ -0.57
SHANK2-210ENST00000449116 POLR2GP62487 172 aaKnown RBP eCLIP11.51□□□□□ -0.57
SHANK2-210ENST00000449116 UNQ5815/PRO19632Q6UWF5 114 aa11.51□□□□□ -0.57
SHANK2-210ENST00000449116 PRIMA1Q86XR5 153 aa11.51□□□□□ -0.57
SHANK2-210ENST00000449116 OR4F5Q8NH21 305 aa11.51□□□□□ -0.57
SHANK2-210ENST00000449116 DTD1Q8TEA8 209 aa11.51□□□□□ -0.57
SHANK2-210ENST00000449116 CHAC2Q8WUX2 184 aa11.51□□□□□ -0.57
SHANK2-210ENST00000449116 GON7Q9BXV9 100 aa11.51□□□□□ -0.57
SHANK2-210ENST00000449116 WSB1Q9Y6I7 421 aa11.51□□□□□ -0.57
SHANK2-210ENST00000449116 TET2Q6N021 2002 aaPredicted RBP11.51□□□□□ -0.57
SHANK2-210ENST00000449116 NIPBLQ6KC79 2804 aaeCLIP11.51□□□□□ -0.57
SHANK2-210ENST00000449116 G3V318 75 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 K7EPK0 472 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 OR13C7P0DN81 318 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 AREGP15514 252 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 PSMB6P28072 239 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 S100A10P60903 97 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 ERHP84090 104 aaKnown RBP11.5□□□□□ -0.57
SHANK2-210ENST00000449116 WT1-ASQ06250 92 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 RAB32Q13637 225 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 C19orf54Q5BKX5 351 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 TTC9CQ8N5M4 171 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 OR2C3Q8N628 320 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 PPP1R1CQ8WVI7 109 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 WDR89Q96FK6 387 aaPredicted RBP11.5□□□□□ -0.57
SHANK2-210ENST00000449116 CIB3Q96Q77 187 aaPredicted RBP11.5□□□□□ -0.57
SHANK2-210ENST00000449116 HIPK2Q9H2X6 1198 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 SERTAD4Q9NUC0 356 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 RCL1Q9Y2P8 373 aaKnown RBP11.5□□□□□ -0.57
SHANK2-210ENST00000449116 LSM5Q9Y4Y9 91 aaKnown RBP11.5□□□□□ -0.57
SHANK2-210ENST00000449116 NF1P21359 2839 aa11.5□□□□□ -0.57
SHANK2-210ENST00000449116 NPIPB5A8MRT5 1133 aa11.49□□□□□ -0.57
SHANK2-210ENST00000449116 SSSCA1O60232 199 aa11.49□□□□□ -0.57
SHANK2-210ENST00000449116 LY86O95711 162 aa11.49□□□□□ -0.57
SHANK2-210ENST00000449116 CRYGCP07315 174 aa11.49□□□□□ -0.57
SHANK2-210ENST00000449116 IAPPP10997 89 aa11.49□□□□□ -0.57
SHANK2-210ENST00000449116 RAP2BP61225 183 aa11.49□□□□□ -0.57
SHANK2-210ENST00000449116 CD83Q01151 205 aa11.49□□□□□ -0.57
SHANK2-210ENST00000449116 CFHR3Q02985 330 aa11.49□□□□□ -0.57
SHANK2-210ENST00000449116 LRRC37A5PQ49AS3 106 aa11.49□□□□□ -0.57
SHANK2-210ENST00000449116 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.49□□□□□ -0.57
SHANK2-210ENST00000449116 LINC01006Q8NI28 216 aa11.49□□□□□ -0.57
SHANK2-210ENST00000449116 FAM110DQ8TAY7 271 aaPredicted RBP11.49□□□□□ -0.57
SHANK2-210ENST00000449116 HEYLQ9NQ87 328 aaPredicted RBP11.49□□□□□ -0.57
SHANK2-210ENST00000449116 CLPSL1A2RUU4 121 aa11.48□□□□□ -0.57
SHANK2-210ENST00000449116 FBXO24O75426 580 aa11.48□□□□□ -0.57
SHANK2-210ENST00000449116 REG1AP05451 166 aa11.48□□□□□ -0.57
SHANK2-210ENST00000449116 PET100P0DJ07 73 aa11.48□□□□□ -0.57
SHANK2-210ENST00000449116 CTRB1P17538 263 aa11.48□□□□□ -0.57
SHANK2-210ENST00000449116 PPIFP30405 207 aaKnown RBP11.48□□□□□ -0.57
SHANK2-210ENST00000449116 SLC35B1P78383 322 aa11.48□□□□□ -0.57
SHANK2-210ENST00000449116 CTRB2Q6GPI1 263 aa11.48□□□□□ -0.57
SHANK2-210ENST00000449116 ZNF114Q8NC26 417 aa11.48□□□□□ -0.57
SHANK2-210ENST00000449116 OR5T1Q8NG75 326 aa11.48□□□□□ -0.57
SHANK2-210ENST00000449116 RAB40CQ96S21 281 aa11.48□□□□□ -0.57
SHANK2-210ENST00000449116 WNT10AQ9GZT5 417 aa11.48□□□□□ -0.57
SHANK2-210ENST00000449116 SETD2Q9BYW2 2564 aaPredicted RBP11.47□□□□□ -0.57
SHANK2-210ENST00000449116 A0A1B0GUS0 222 aa11.47□□□□□ -0.57
SHANK2-210ENST00000449116 PSMB11A5LHX3 300 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms