RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ZFHX3Q15911 3703 aa11.14□□□□□ -0.63
SHMT2-203ENST00000449049 TEX50A0A1B0GTY4 177 aa11.14□□□□□ -0.63
SHMT2-203ENST00000449049 RAB14P61106 215 aa11.14□□□□□ -0.63
SHMT2-203ENST00000449049 HSPE1P61604 102 aaKnown RBP11.14□□□□□ -0.63
SHMT2-203ENST00000449049 CXorf66Q5JRM2 361 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-203ENST00000449049 ZNF562Q6V9R5 426 aa11.14□□□□□ -0.63
SHMT2-203ENST00000449049 DUX5Q96PT3 197 aa11.14□□□□□ -0.63
SHMT2-203ENST00000449049 COMMD5Q9GZQ3 224 aa11.14□□□□□ -0.63
SHMT2-203ENST00000449049 IGHV7-81A0A0B4J1V7 117 aa11.13□□□□□ -0.63
SHMT2-203ENST00000449049 GPR137BO60478 399 aa11.13□□□□□ -0.63
SHMT2-203ENST00000449049 NXPH3O95157 252 aa11.13□□□□□ -0.63
SHMT2-203ENST00000449049 MBPP02686 304 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-203ENST00000449049 NKX2-1P43699 371 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-203ENST00000449049 SPCS3P61009 180 aa11.13□□□□□ -0.63
SHMT2-203ENST00000449049 RAP2BP61225 183 aa11.13□□□□□ -0.63
SHMT2-203ENST00000449049 POLR2GP62487 172 aaKnown RBP eCLIP11.13□□□□□ -0.63
SHMT2-203ENST00000449049 TNFRSF9Q07011 255 aa11.13□□□□□ -0.63
SHMT2-203ENST00000449049 C10orf55Q5SWW7 151 aa11.13□□□□□ -0.63
SHMT2-203ENST00000449049 JMJD8Q96S16 334 aa11.13□□□□□ -0.63
SHMT2-203ENST00000449049 HSPB9Q9BQS6 159 aa11.13□□□□□ -0.63
SHMT2-203ENST00000449049 CGB1A6NKQ9 187 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 ACTL6BO94805 426 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 RNASE1P07998 156 aaKnown RBP11.12□□□□□ -0.63
SHMT2-203ENST00000449049 GNB1P62873 340 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 CX3CL1P78423 397 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 OR1L8Q8NGR8 309 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 NDUFA4L2Q9NRX3 87 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 HIVEP2P31629 2446 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 NAV3Q8IVL0 2385 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 A0A1B0GW64 132 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 SH2D7A6NKC9 451 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-203ENST00000449049 E7EUB6 86 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 SCGB1D2O95969 90 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 IFNA17P01571 189 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 RPL27AP46776 148 aaKnown RBP11.12□□□□□ -0.63
SHMT2-203ENST00000449049 BLCAPP62952 87 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 S100A12P80511 92 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 NDPQ00604 133 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 PRCDQ00LT1 54 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 RAB32Q13637 225 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 FXYD3Q14802 87 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 PPP1R1CQ8WVI7 109 aa11.12□□□□□ -0.63
SHMT2-203ENST00000449049 SRSF12Q8WXF0 261 aaKnown RBP11.12□□□□□ -0.63
SHMT2-203ENST00000449049 TLN2Q9Y4G6 2542 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 K7EPK0 472 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 OPN1MWP04001 364 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 OPN1MW2P0DN77 364 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 OPN1MW3P0DN78 364 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 UBA52P62987 128 aaKnown RBP11.11□□□□□ -0.63
SHMT2-203ENST00000449049 ARPC1AQ92747 370 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 RBKSQ9H477 322 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 ZFP57Q9NU63 452 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 RCL1Q9Y2P8 373 aaKnown RBP11.11□□□□□ -0.63
SHMT2-203ENST00000449049 TET2Q6N021 2002 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-203ENST00000449049 TSPAN4O14817 238 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 SYNGR2O43760 224 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 CNIH1O95406 144 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 CFDP00746 253 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-203ENST00000449049 IGHG2P01859 326 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 S100A6P06703 90 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 BTF3P20290 206 aaKnown RBP11.11□□□□□ -0.63
SHMT2-203ENST00000449049 RPL15P61313 204 aaKnown RBP11.11□□□□□ -0.63
SHMT2-203ENST00000449049 NPFFR1Q9GZQ6 430 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 MAGT1Q9H0U3 335 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 ZC4H2Q9NQZ6 224 aa11.11□□□□□ -0.63
SHMT2-203ENST00000449049 TEX22C9J3V5 150 aa11.1□□□□□ -0.63
SHMT2-203ENST00000449049 INS-IGF2F8WCM5 200 aa11.1□□□□□ -0.63
SHMT2-203ENST00000449049 TCF21O43680 179 aa11.1□□□□□ -0.63
SHMT2-203ENST00000449049 MED6O75586 246 aa11.1□□□□□ -0.63
SHMT2-203ENST00000449049 PSMB6P28072 239 aa11.1□□□□□ -0.63
SHMT2-203ENST00000449049 Q6ZS46 218 aa11.1□□□□□ -0.63
SHMT2-203ENST00000449049 OR2T35Q8NGX2 323 aa11.1□□□□□ -0.63
SHMT2-203ENST00000449049 PCNPQ8WW12 178 aaKnown RBP11.1□□□□□ -0.63
SHMT2-203ENST00000449049 MARC2Q969Z3 335 aa11.1□□□□□ -0.63
SHMT2-203ENST00000449049 F8P00451 2351 aa11.1□□□□□ -0.63
SHMT2-203ENST00000449049 MXRA5Q9NR99 2828 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 TRAV14DV4A0A0A6YYC5 116 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 G3V3Q6 166 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 KCNAB3O43448 404 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 EGR2P11161 476 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-203ENST00000449049 ZP3P21754 424 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 VDAC2P45880 294 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-203ENST00000449049 S100A10P60903 97 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 LRRC37A5PQ49AS3 106 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 SPINK9Q5DT21 86 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 DTD1Q8TEA8 209 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 SRSF8Q9BRL6 282 aaKnown RBP11.09□□□□□ -0.63
SHMT2-203ENST00000449049 C11orf1Q9H5F2 150 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 FBXO7Q9Y3I1 522 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 LSM5Q9Y4Y9 91 aaKnown RBP11.09□□□□□ -0.63
SHMT2-203ENST00000449049 A0A1W2PN81 502 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 FAM181BA6NEQ2 426 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 MSGN1A6NI15 193 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 LINC01548A6NM66 108 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 CEBPZOSA8MTT3 80 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 H0YIZ8 118 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 WRBO00258 174 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 ATP6V0E1O15342 81 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 SSSCA1O60232 199 aa11.09□□□□□ -0.63
SHMT2-203ENST00000449049 DEDDO75618 318 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms