RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 C17orf112F2Z3M2 114 aa14.27□□□□□ -0.12
LMNA-208ENST00000448611 INS-IGF2F8WCM5 200 aa14.27□□□□□ -0.12
LMNA-208ENST00000448611 ENSAO43768 121 aaKnown RBP14.27□□□□□ -0.12
LMNA-208ENST00000448611 PRTN3P24158 256 aa14.27□□□□□ -0.12
LMNA-208ENST00000448611 PPT1P50897 306 aa14.27□□□□□ -0.12
LMNA-208ENST00000448611 MRGPRG-AS1Q2M3A8 158 aa14.27□□□□□ -0.12
LMNA-208ENST00000448611 LDLRAD2Q5SZI1 272 aa14.27□□□□□ -0.12
LMNA-208ENST00000448611 HCP5Q6MZN7 132 aa14.27□□□□□ -0.12
LMNA-208ENST00000448611 MOB3BQ86TA1 216 aa14.27□□□□□ -0.12
LMNA-208ENST00000448611 ZNF709Q8N972 641 aa14.27□□□□□ -0.12
LMNA-208ENST00000448611 RPEQ96AT9 228 aa14.27□□□□□ -0.12
LMNA-208ENST00000448611 SMDT1Q9H4I9 107 aa14.27□□□□□ -0.12
LMNA-208ENST00000448611 ZNF430Q9H8G1 570 aaPredicted RBP14.27□□□□□ -0.12
LMNA-208ENST00000448611 HELZ2Q9BYK8 2649 aaKnown RBP14.27□□□□□ -0.12
LMNA-208ENST00000448611 LRRK2Q5S007 2527 aa14.27□□□□□ -0.13
LMNA-208ENST00000448611 SMCO3A2RU48 225 aa14.27□□□□□ -0.13
LMNA-208ENST00000448611 E7EUB6 86 aa14.27□□□□□ -0.13
LMNA-208ENST00000448611 SLC25A17O43808 307 aa14.27□□□□□ -0.13
LMNA-208ENST00000448611 MPDU1O75352 247 aa14.27□□□□□ -0.13
LMNA-208ENST00000448611 MBP02144 154 aa14.27□□□□□ -0.13
LMNA-208ENST00000448611 ATP5IP56385 69 aaPredicted RBP14.27□□□□□ -0.13
LMNA-208ENST00000448611 ARSJQ5FYB0 599 aaPredicted RBP14.27□□□□□ -0.13
LMNA-208ENST00000448611 C1orf122Q6ZSJ8 110 aa14.27□□□□□ -0.13
LMNA-208ENST00000448611 OR10W1Q8NGF6 305 aa14.27□□□□□ -0.13
LMNA-208ENST00000448611 C1orf159Q96HA4 380 aa14.27□□□□□ -0.13
LMNA-208ENST00000448611 NKX6-2Q9C056 277 aaPredicted RBP14.27□□□□□ -0.13
LMNA-208ENST00000448611 TPSG1Q9NRR2 321 aa14.27□□□□□ -0.13
LMNA-208ENST00000448611 TNCP24821 2201 aa14.26□□□□□ -0.13
LMNA-208ENST00000448611 A0A1W2PPI3 338 aa14.26□□□□□ -0.13
LMNA-208ENST00000448611 CGB1A6NKQ9 187 aa14.26□□□□□ -0.13
LMNA-208ENST00000448611 C2orf83Q53S99 150 aa14.26□□□□□ -0.13
LMNA-208ENST00000448611 FFAR4Q5NUL3 377 aa14.26□□□□□ -0.13
LMNA-208ENST00000448611 LCN15Q6UWW0 184 aa14.26□□□□□ -0.13
LMNA-208ENST00000448611 KIR3DL3Q8N743 410 aa14.26□□□□□ -0.13
LMNA-208ENST00000448611 CLDND2Q8NHS1 167 aa14.26□□□□□ -0.13
LMNA-208ENST00000448611 ODF3BA8MYP8 253 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 IGHV4-39P01824 125 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 RNASE2P10153 161 aaKnown RBP14.25□□□□□ -0.13
LMNA-208ENST00000448611 TPTE2P1Q5T6R2 138 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 ZNF787Q6DD87 383 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 TEX45Q8NA69 505 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 BPESC1Q9GZL8 116 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 LSM4Q9Y4Z0 139 aaKnown RBP14.25□□□□□ -0.13
LMNA-208ENST00000448611 KPTNQ9Y664 436 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 CRYGBP07316 175 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 HTR1DP28221 377 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 PAX2Q02962 417 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 HAGHQ16775 308 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 ZNF506Q5JVG8 444 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 C10orf55Q5SWW7 151 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 OR10G4Q8NGN3 311 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 OR10G9Q8NGN4 311 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 OR10G7Q8NGN6 311 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 MGST2Q99735 147 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 SLC35B3Q9H1N7 401 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 NPVFQ9HCQ7 196 aa14.25□□□□□ -0.13
LMNA-208ENST00000448611 ARHGAP32A7KAX9 2087 aa14.24□□□□□ -0.13
LMNA-208ENST00000448611 SPTAN1Q13813 2472 aaKnown RBP14.24□□□□□ -0.13
LMNA-208ENST00000448611 A0A1W2PN81 502 aa14.24□□□□□ -0.13
LMNA-208ENST00000448611 MAP1LC3B2A6NCE7 125 aa14.24□□□□□ -0.13
LMNA-208ENST00000448611 CNTFRP26992 372 aa14.24□□□□□ -0.13
LMNA-208ENST00000448611 CHRNA7P36544 502 aa14.24□□□□□ -0.13
LMNA-208ENST00000448611 KLRD1Q13241 179 aa14.24□□□□□ -0.13
LMNA-208ENST00000448611 ICAM4Q14773 271 aa14.24□□□□□ -0.13
LMNA-208ENST00000448611 MAP1LC3BQ9GZQ8 125 aa14.24□□□□□ -0.13
LMNA-208ENST00000448611 UNKLQ9H9P5 680 aaKnown RBP14.24□□□□□ -0.13
LMNA-208ENST00000448611 DPM3Q9P2X0 92 aa14.24□□□□□ -0.13
LMNA-208ENST00000448611 UTP20O75691 2785 aaKnown RBP14.24□□□□□ -0.13
LMNA-208ENST00000448611 FNDC10F2Z333 226 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 SNAPINO95295 136 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 OPRK1P41145 380 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 FGF8P55075 233 aaPredicted RBP14.23□□□□□ -0.13
LMNA-208ENST00000448611 LMO4P61968 165 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 WT1-ASQ06250 92 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 PSG5Q15238 335 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.23□□□□□ -0.13
LMNA-208ENST00000448611 SUN5Q8TC36 379 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 SPOCK3Q9BQ16 436 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 GGTLC1Q9BX51 225 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 SLC39A9Q9NUM3 307 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 CTXND1A0A1B0GTU2 59 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 SOX15O60248 233 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 NPBWR1P48145 328 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 ERHP84090 104 aaKnown RBP14.23□□□□□ -0.13
LMNA-208ENST00000448611 VMO1Q7Z5L0 202 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 SLC25A22Q9H936 323 aa14.23□□□□□ -0.13
LMNA-208ENST00000448611 GCN1Q92616 2671 aaKnown RBP14.22□□□□□ -0.13
LMNA-208ENST00000448611 DNASE2O00115 360 aaPredicted RBP14.22□□□□□ -0.13
LMNA-208ENST00000448611 TIMM23O14925 209 aa14.22□□□□□ -0.13
LMNA-208ENST00000448611 EIF3GO75821 320 aaKnown RBP eCLIP14.22□□□□□ -0.13
LMNA-208ENST00000448611 LCN2P80188 198 aa14.22□□□□□ -0.13
LMNA-208ENST00000448611 PRSS8Q16651 343 aa14.22□□□□□ -0.13
LMNA-208ENST00000448611 ACOT6Q3I5F7 207 aaPredicted RBP14.22□□□□□ -0.13
LMNA-208ENST00000448611 RNF5Q99942 180 aa14.22□□□□□ -0.13
LMNA-208ENST00000448611 SIRPDQ9H106 197 aa14.22□□□□□ -0.13
LMNA-208ENST00000448611 GNG13Q9P2W3 67 aa14.22□□□□□ -0.13
LMNA-208ENST00000448611 TMA7Q9Y2S6 64 aaKnown RBP14.22□□□□□ -0.13
LMNA-208ENST00000448611 SIGLEC9Q9Y336 463 aa14.22□□□□□ -0.13
LMNA-208ENST00000448611 LOC102723971A0A1B0GUV8 181 aa14.21□□□□□ -0.13
LMNA-208ENST00000448611 HSPB1P04792 205 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms