RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 VKORC1L1Q8N0U8 176 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 OR2M3Q8NG83 312 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 IGKV1D-13A0A0B4J2D9 117 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 IGKV1-13P0DP09 117 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 NHSL1Q5SYE7 1610 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 ZNF658BQ4V348 819 aaPredicted RBP6.68□□□□□ -1.34
SMG1-202ENST00000446231 MIR17HGQ75NE6 70 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 COL4A1P02462 1669 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 MS4A5Q9H3V2 200 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 ADAMTSL3P82987 1691 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 C9orf118A6NHY6 69 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 FAM157AC9JC47 383 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 TSPAN2O60636 221 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 APOHP02749 345 aaPredicted RBP6.67□□□□□ -1.34
SMG1-202ENST00000446231 ABCA12Q86UK0 2595 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 LOC105371242A0A075B767 164 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 PPIAL4CA0A0B4J2A2 164 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 PPIAL4GP0DN37 164 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 PLAUP00749 431 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 DNPH1O43598 174 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 PSG4Q00888 419 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 TCF24Q7RTU0 167 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 ZNF418Q8TF45 676 aaPredicted RBP6.67□□□□□ -1.34
SMG1-202ENST00000446231 H1FXQ92522 213 aaKnown RBP6.67□□□□□ -1.34
SMG1-202ENST00000446231 TMEM160Q9NX00 188 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 IL4P05112 153 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 APOMO95445 188 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 HSPE1P61604 102 aaKnown RBP6.67□□□□□ -1.34
SMG1-202ENST00000446231 FBXW9Q5XUX1 488 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 SPEM1Q8N4L4 309 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 OR9G4Q8NGQ1 327 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 SCARF2Q96GP6 870 aaPredicted RBP6.67□□□□□ -1.34
SMG1-202ENST00000446231 CEP295Q9C0D2 2601 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 KLRC4-KLRK1H3BQV0 150 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 CTSBP07858 339 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 C3orf79P0CE67 100 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 SCGB1A1P11684 91 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 CCL7P80098 99 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 GAGE2BQ13066 116 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 GUSBP1Q15486 140 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 GAGE2EQ4V326 116 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 C6orf15Q6UXA7 325 aaPredicted RBP6.67□□□□□ -1.34
SMG1-202ENST00000446231 ZNF645Q8N7E2 425 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 GAGE2DQ9UEU5 116 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 SELENOKQ9Y6D0 94 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 F5H697 171 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 M0R3E3 92 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 DRD3P35462 400 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 IGLV3-21P80748 117 aaPredicted RBP6.67□□□□□ -1.34
SMG1-202ENST00000446231 CRIM1Q9NZV1 1036 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 LY96Q9Y6Y9 160 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 ALS2Q96Q42 1657 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 CEACAM8P31997 349 aaPredicted RBP6.67□□□□□ -1.34
SMG1-202ENST00000446231 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.67□□□□□ -1.34
SMG1-202ENST00000446231 SRSF12Q8WXF0 261 aaKnown RBP6.67□□□□□ -1.34
SMG1-202ENST00000446231 K7ESF4 209 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 SPINK8P0C7L1 97 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 CD300EQ496F6 205 aaPredicted RBP6.66□□□□□ -1.34
SMG1-202ENST00000446231 DRAM1Q8N682 238 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 RPL11P62913 178 aaKnown RBP6.66□□□□□ -1.34
SMG1-202ENST00000446231 BMPERQ8N8U9 685 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 RBFOX2O43251 390 aaKnown RBP eCLIP6.66□□□□□ -1.345e-6■■■■□ 21.3
SMG1-202ENST00000446231 LEPP41159 167 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 DYNLRB1Q9NP97 96 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 DENND4AQ7Z401 1863 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 AGRNO00468 2067 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 LIFP15018 202 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 BHLHA15Q7RTS1 189 aaPredicted RBP6.66□□□□□ -1.34
SMG1-202ENST00000446231 ARHGAP32A7KAX9 2087 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 MOB3BQ86TA1 216 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 MDP1Q86V88 176 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 ABHD12Q8N2K0 398 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 ANAPC10Q9UM13 185 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 J3QR06 171 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 SPRY3O43610 288 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 SYNGR3O43761 229 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 IGLC2P0DOY2 106 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 IGLC3P0DOY3 106 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 RPL7P18124 248 aaKnown RBP6.66□□□□□ -1.34
SMG1-202ENST00000446231 TMUB1Q9BVT8 246 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 A0A1B0GUT8 65 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 TMEM196Q5HYL7 178 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 SGK494Q96LW2 274 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 MARF1Q9Y4F3 1742 aaKnown RBP6.66□□□□□ -1.34
SMG1-202ENST00000446231 IGHV2-70DA0A0C4DH43 119 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 TMEM262E9PQX1 116 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 C3orf80F5H4A9 247 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 K7EQS6 105 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 SCN10AQ9Y5Y9 1956 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 CGAP01215 116 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 RPP25LQ8N5L8 163 aaKnown RBP6.66□□□□□ -1.34
SMG1-202ENST00000446231 CSTL1Q9H114 145 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 NPVFQ9HCQ7 196 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 TMEM74BQ9NUR3 256 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 CSRP1P21291 193 aaKnown RBP6.66□□□□□ -1.34
SMG1-202ENST00000446231 GEMIN7Q9H840 131 aaKnown RBP6.66□□□□□ -1.34
SMG1-202ENST00000446231 DEPPQ9NTK1 212 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 ALKBH6Q3KRA9 238 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 TCF19Q9Y242 345 aa6.66□□□□□ -1.34
SMG1-202ENST00000446231 SYS1-DBNDD2H3BUS1 97 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms