RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 TAAR6Q96RI8 345 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 TECRQ9NZ01 308 aaKnown RBP11.55□□□□□ -0.56
VPS52-212ENST00000445902 LOC102723996A0A087X1L8 192 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 FAM181BA6NEQ2 426 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 SH2D7A6NKC9 451 aaPredicted RBP11.55□□□□□ -0.56
VPS52-212ENST00000445902 MPDU1O75352 247 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 TIGITQ495A1 244 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 Q6ZR03 302 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 SLC24A4Q8NFF2 622 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 WASHC3Q9Y3C0 194 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 A0A1W2PN81 502 aa11.54□□□□□ -0.56
VPS52-212ENST00000445902 TMEM30CPA0ZSE6 113 aa11.54□□□□□ -0.56
VPS52-212ENST00000445902 KLF7O75840 302 aaPredicted RBP11.54□□□□□ -0.56
VPS52-212ENST00000445902 HLA-DQA1P01909 254 aa11.54□□□□□ -0.56
VPS52-212ENST00000445902 RPL8P62917 257 aaKnown RBP11.54□□□□□ -0.56
VPS52-212ENST00000445902 ZBTB34Q8NCN2 500 aa11.54□□□□□ -0.56
VPS52-212ENST00000445902 C11orf52Q96A22 123 aa11.54□□□□□ -0.56
VPS52-212ENST00000445902 RTL8AQ9BWD3 113 aa11.54□□□□□ -0.56
VPS52-212ENST00000445902 CST9LQ9H4G1 147 aa11.54□□□□□ -0.56
VPS52-212ENST00000445902 ZNF891A8MT65 544 aaPredicted RBP11.54□□□□□ -0.56
VPS52-212ENST00000445902 IGFBP2P18065 325 aa11.54□□□□□ -0.56
VPS52-212ENST00000445902 GATA2P23769 480 aaPredicted RBP11.54□□□□□ -0.56
VPS52-212ENST00000445902 RPL19P84098 196 aaKnown RBP11.54□□□□□ -0.56
VPS52-212ENST00000445902 C3AR1Q16581 482 aa11.54□□□□□ -0.56
VPS52-212ENST00000445902 OR4A47Q6IF82 309 aa11.54□□□□□ -0.56
VPS52-212ENST00000445902 MUC15Q8N387 334 aa11.54□□□□□ -0.56
VPS52-212ENST00000445902 Q8TCH9 128 aa11.54□□□□□ -0.56
VPS52-212ENST00000445902 HSD17B10Q99714 261 aaKnown RBP11.54□□□□□ -0.56
VPS52-212ENST00000445902 C12orf49Q9H741 205 aa11.54□□□□□ -0.56
VPS52-212ENST00000445902 MT-CO2P00403 227 aa11.53□□□□□ -0.56
VPS52-212ENST00000445902 GCNT2Q8N0V5 402 aa11.53□□□□□ -0.56
VPS52-212ENST00000445902 ZNF331Q9NQX6 463 aaPredicted RBP11.53□□□□□ -0.56
VPS52-212ENST00000445902 DSPP15924 2871 aaKnown RBP11.53□□□□□ -0.56
VPS52-212ENST00000445902 OR7C2O60412 319 aa11.53□□□□□ -0.56
VPS52-212ENST00000445902 GFRA3O60609 400 aa11.53□□□□□ -0.56
VPS52-212ENST00000445902 CELA3BP08861 270 aa11.53□□□□□ -0.56
VPS52-212ENST00000445902 CA7P43166 264 aa11.53□□□□□ -0.56
VPS52-212ENST00000445902 BPIFB3P59826 476 aa11.53□□□□□ -0.56
VPS52-212ENST00000445902 FOXF2Q12947 444 aa11.53□□□□□ -0.56
VPS52-212ENST00000445902 OR2D3Q8NGH3 330 aa11.53□□□□□ -0.56
VPS52-212ENST00000445902 LINC00479Q96M42 142 aa11.53□□□□□ -0.56
VPS52-212ENST00000445902 CDX2Q99626 313 aaPredicted RBP11.53□□□□□ -0.56
VPS52-212ENST00000445902 HINT2Q9BX68 163 aa11.53□□□□□ -0.56
VPS52-212ENST00000445902 GSX1Q9H4S2 264 aaPredicted RBP11.53□□□□□ -0.56
VPS52-212ENST00000445902 HES4Q9HCC6 221 aa11.53□□□□□ -0.56
VPS52-212ENST00000445902 ARFGEF3Q5TH69 2177 aa11.53□□□□□ -0.56
VPS52-212ENST00000445902 TRAV30A0A087WSZ9 112 aa11.52□□□□□ -0.56
VPS52-212ENST00000445902 PRSS46E5RG02 174 aa11.52□□□□□ -0.56
VPS52-212ENST00000445902 ERVK11-1P61568 191 aa11.52□□□□□ -0.56
VPS52-212ENST00000445902 UBE2G1P62253 170 aa11.52□□□□□ -0.56
VPS52-212ENST00000445902 OCIAD2Q56VL3 154 aa11.52□□□□□ -0.56
VPS52-212ENST00000445902 METRNQ9UJH8 293 aa11.52□□□□□ -0.56
VPS52-212ENST00000445902 ARL2-SNX15V9GYD0 113 aa11.52□□□□□ -0.56
VPS52-212ENST00000445902 AHCTF1Q8WYP5 2266 aa11.52□□□□□ -0.56
VPS52-212ENST00000445902 hDV102S1A0JD36 115 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 NUDT3O95989 172 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 CCL4P13236 92 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 CAMPP49913 170 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 SELENOVP59797 346 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 MOB3BQ86TA1 216 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 SPACA3Q8IXA5 215 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 ZNF784Q8NCA9 323 aaPredicted RBP11.52□□□□□ -0.57
VPS52-212ENST00000445902 OR13A1Q8NGR1 328 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 OR5B3Q8NH48 314 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 COQ2Q96H96 371 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 OR8B2Q96RD0 313 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 NPVFQ9HCQ7 196 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 DYSFO75923 2080 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 OOEPA6NGQ2 149 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 MYOD1P15172 320 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 CD24P25063 80 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 MFAP2P55001 183 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 AMMECR1LQ6DCA0 310 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 SPINK14Q6IE38 97 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 TEPPQ6URK8 271 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 MCRIP2Q9BUT9 160 aaKnown RBP11.52□□□□□ -0.57
VPS52-212ENST00000445902 ZNF355PQ9NSJ1 428 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 POLDIP2Q9Y2S7 368 aa11.52□□□□□ -0.57
VPS52-212ENST00000445902 GGTLC3B5MD39 225 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 VDAC2P45880 294 aaPredicted RBP11.51□□□□□ -0.57
VPS52-212ENST00000445902 EDDM3AQ14507 147 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 ZNF146Q15072 292 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 OR1C1Q15619 314 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 RPL39P5Q59GN2 51 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 GDF5OSQ5U4N7 250 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 SMIM15Q7Z3B0 74 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 TMEM45BQ96B21 275 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 PLEKHA3Q9HB20 300 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 OSTCQ9NRP0 149 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 IL19Q9UHD0 177 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 LY96Q9Y6Y9 160 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 MUC21A0A0G2JKD1 596 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 MUC21A0A140T8X8 626 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 H0YJW9 148 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 TAX1BP3O14907 124 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 PROP1O75360 226 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 ARR3P36575 388 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 MUC21Q5SSG8 566 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 WDR54Q9H977 334 aa11.51□□□□□ -0.57
VPS52-212ENST00000445902 LSM4Q9Y4Z0 139 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms