RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 HOXC12P31275 282 aa11.71□□□□□ -0.53
ERCC3-203ENST00000445889 ZNF718Q3SXZ3 478 aa11.71□□□□□ -0.53
ERCC3-203ENST00000445889 MRPL54Q6P161 138 aaKnown RBP11.71□□□□□ -0.53
ERCC3-203ENST00000445889 GNB4Q9HAV0 340 aa11.71□□□□□ -0.53
ERCC3-203ENST00000445889 FBXL7Q9UJT9 491 aa11.71□□□□□ -0.53
ERCC3-203ENST00000445889 PRSS46E5RG02 174 aa11.71□□□□□ -0.54
ERCC3-203ENST00000445889 PAFAH1B2P68402 229 aa11.71□□□□□ -0.54
ERCC3-203ENST00000445889 C21orf62-AS1Q17RA5 79 aa11.71□□□□□ -0.54
ERCC3-203ENST00000445889 TMEM183BQ1AE95 376 aa11.71□□□□□ -0.54
ERCC3-203ENST00000445889 SIGLECL1Q8N7X8 197 aa11.71□□□□□ -0.54
ERCC3-203ENST00000445889 EAF1Q96JC9 268 aaPredicted RBP11.71□□□□□ -0.54
ERCC3-203ENST00000445889 LINC00479Q96M42 142 aa11.71□□□□□ -0.54
ERCC3-203ENST00000445889 NPVFQ9HCQ7 196 aa11.71□□□□□ -0.54
ERCC3-203ENST00000445889 SERTAD4Q9NUC0 356 aa11.71□□□□□ -0.54
ERCC3-203ENST00000445889 TACC2O95359 2948 aa11.71□□□□□ -0.54
ERCC3-203ENST00000445889 A0A1B0GWJ7 208 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 MGST1P10620 155 aaKnown RBP11.7□□□□□ -0.54
ERCC3-203ENST00000445889 BRS3P32247 399 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 CCL11P51671 97 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 SELENOTP62341 195 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 TEX43Q6ZNM6 134 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 LHFPL4Q7Z7J7 247 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 ATOH7Q8N100 152 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 FAM19A2Q8N3H0 131 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 WDR31Q8NA23 367 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 SNRNP40Q96DI7 357 aaKnown RBP11.7□□□□□ -0.54
ERCC3-203ENST00000445889 GMPPAQ96IJ6 420 aaPredicted RBP11.7□□□□□ -0.54
ERCC3-203ENST00000445889 RCHY1Q96PM5 261 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 A8MXE2 369 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 LGALS4P56470 323 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 RPP30P78346 268 aaKnown RBP11.7□□□□□ -0.54
ERCC3-203ENST00000445889 RPEL1Q2QD12 228 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 CENPWQ5EE01 88 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 TEPPQ6URK8 271 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 FAM214BQ7L5A3 538 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 UHRF2Q96PU4 802 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 LPAR2Q9HBW0 351 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 SPRY3O43610 288 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 OR7C2O60412 319 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 MPDU1O75352 247 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 BTF3P20290 206 aaKnown RBP11.7□□□□□ -0.54
ERCC3-203ENST00000445889 RANP62826 216 aaKnown RBP11.7□□□□□ -0.54
ERCC3-203ENST00000445889 LYG1Q8N1E2 194 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 SSBP3Q9BWW4 388 aaPredicted RBP11.7□□□□□ -0.54
ERCC3-203ENST00000445889 IFI27L2Q9H2X8 130 aa11.7□□□□□ -0.54
ERCC3-203ENST00000445889 PTPRBP23467 1997 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 YLPM1P49750 1951 aaKnown RBP11.69□□□□□ -0.54
ERCC3-203ENST00000445889 TRAV34A0A0B4J273 112 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 PCNX2A6NKB5 2137 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 NPY1RP25929 384 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 AMTP48728 403 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 MMDQ15546 238 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 OR4A47Q6IF82 309 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 MOGAT3Q86VF5 341 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 C9orf106Q8NAJ2 232 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 OPN3Q9H1Y3 402 aaPredicted RBP11.69□□□□□ -0.54
ERCC3-203ENST00000445889 TBL2Q9Y4P3 447 aaKnown RBP11.69□□□□□ -0.54
ERCC3-203ENST00000445889 TPRP12270 2363 aaKnown RBP11.69□□□□□ -0.54
ERCC3-203ENST00000445889 COMPP49747 757 aaPredicted RBP11.69□□□□□ -0.54
ERCC3-203ENST00000445889 GNG4P50150 75 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 LOXL3P58215 753 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 RHOBP62745 196 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 SUMO1P63165 101 aaKnown RBP11.69□□□□□ -0.54
ERCC3-203ENST00000445889 DMRTA1Q5VZB9 504 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 SLC24A4Q8NFF2 622 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 SGK494Q96LW2 274 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 ZPBPQ9BS86 351 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 WNT10AQ9GZT5 417 aa11.69□□□□□ -0.54
ERCC3-203ENST00000445889 BDP1A6H8Y1 2624 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 POLEQ07864 2286 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 IGKV1OR2-108A0A075B7D4 117 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 HELTA6NFD8 242 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 DIRC3C9JPN6 131 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 KIR2DL2P43627 348 aaPredicted RBP11.68□□□□□ -0.54
ERCC3-203ENST00000445889 CT45A1Q5HYN5 189 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 Q6ZT83 130 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 TCTEX1D1Q8N7M0 179 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 CT45A3Q8NHU0 189 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 RND1Q92730 232 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 C20orf144Q9BQM9 153 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 LSM4Q9Y4Z0 139 aaKnown RBP11.68□□□□□ -0.54
ERCC3-203ENST00000445889 V9GYV3 84 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 TRAV5A0A0B4J249 113 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 ADH4P08319 380 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 TMEM249Q2WGJ8 235 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 INO80CQ6PI98 192 aaPredicted RBP11.68□□□□□ -0.54
ERCC3-203ENST00000445889 GCSAMQ8N6F7 178 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 PLXNB1O43157 2135 aa11.68□□□□□ -0.54
ERCC3-203ENST00000445889 SAA2-SAA4A0A096LPE2 208 aa11.67□□□□□ -0.54
ERCC3-203ENST00000445889 M0QZK8 103 aa11.67□□□□□ -0.54
ERCC3-203ENST00000445889 NKX2-8O15522 239 aa11.67□□□□□ -0.54
ERCC3-203ENST00000445889 ZNF253O75346 499 aa11.67□□□□□ -0.54
ERCC3-203ENST00000445889 MMP23AO75900 390 aa11.67□□□□□ -0.54
ERCC3-203ENST00000445889 IGKV1-16P04430 117 aa11.67□□□□□ -0.54
ERCC3-203ENST00000445889 SAA2P0DJI9 122 aaPredicted RBP11.67□□□□□ -0.54
ERCC3-203ENST00000445889 NTF3P20783 257 aa11.67□□□□□ -0.54
ERCC3-203ENST00000445889 PEAR1Q5VY43 1037 aaPredicted RBP11.67□□□□□ -0.54
ERCC3-203ENST00000445889 FAM90A1Q86YD7 464 aa11.67□□□□□ -0.54
ERCC3-203ENST00000445889 UBALD2Q8IYN6 164 aa11.67□□□□□ -0.54
ERCC3-203ENST00000445889 FAM168AQ92567 244 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms