RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 MC5RP33032 325 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 TMEM200BQ69YZ2 307 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 OR52M1Q8NGK5 317 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 GPR146Q96CH1 333 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 ZNF479Q96JC4 524 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 GPHA2Q96T91 129 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 TMEM222Q9H0R3 208 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 TAAR5O14804 337 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 IGLV2-14P01704 120 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 MSMO1Q15800 293 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 Q6ZRG5 221 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 LRTM2Q8N967 370 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 OR51H1Q8NH63 302 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 MSI2Q96DH6 328 aaKnown RBP6.64□□□□□ -1.35
CCDC39-201ENST00000442201 SEC22AQ96IW7 307 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 CCL19Q99731 98 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 NMES1Q9C002 83 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 TANC2Q9HCD6 1990 aa6.64□□□□□ -1.35
CCDC39-201ENST00000442201 RNF212BA8MTL3 300 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 H0Y980 276 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 J3QKU1 62 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 AGPAT2O15120 278 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 WNT2P09544 360 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 CCL3L1P16619 93 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 CYCSP99999 105 aaKnown RBP6.63□□□□□ -1.35
CCDC39-201ENST00000442201 FBLN7Q53RD9 439 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 KIAA2026Q5HYC2 2103 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 ZNF841Q6ZN19 808 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 IGFBPL1Q8WX77 278 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 TMEM18Q96B42 140 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 AGMATQ9BSE5 352 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 OR5AC2Q9NZP5 309 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 RPUSD1Q9UJJ7 312 aaKnown RBP6.63□□□□□ -1.35
CCDC39-201ENST00000442201 USF3Q68DE3 2245 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 K7EPK0 472 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 UCP1P25874 307 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 BSXQ3C1V8 233 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 PRAMEF5Q5TYX0 476 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 WDR25Q64LD2 544 aaPredicted RBP6.63□□□□□ -1.35
CCDC39-201ENST00000442201 FAM71E2Q8N5Q1 922 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 OR4S2Q8NH73 311 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 ABHD14BQ96IU4 210 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 PATZ1Q9HBE1 687 aaKnown RBP6.63□□□□□ -1.35
CCDC39-201ENST00000442201 LIN7CQ9NUP9 197 aaKnown RBP6.63□□□□□ -1.35
CCDC39-201ENST00000442201 LRBAP50851 2863 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 PIGBOS1A0A0B4J2F0 54 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 ZNF727A8MUV8 499 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 IGHV3-7P01780 117 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 GAPDHP04406 335 aaKnown RBP6.63□□□□□ -1.35
CCDC39-201ENST00000442201 SERPINE2P07093 398 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 PLA2G2AP14555 144 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 GPR12P47775 334 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 LGALS7P47929 136 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 ELLP55199 621 aaPredicted RBP6.63□□□□□ -1.35
CCDC39-201ENST00000442201 UBE2KP61086 200 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 ZNF695Q8IW36 515 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 STPG4Q8N801 248 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 GINS3Q9BRX5 216 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 ABHD14AQ9BUJ0 271 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 FKBP11Q9NYL4 201 aa6.63□□□□□ -1.35
CCDC39-201ENST00000442201 B4DEV8 164 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 CDS2O95674 445 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 CATR1Q13166 79 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 C5orf64Q2M2E5 130 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 LYZL2Q7Z4W2 148 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 ZNF738Q8NE65 137 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 OR4X1Q8NH49 305 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 LEAP2Q969E1 77 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 MRPL27Q9P0M9 148 aaKnown RBP6.62□□□□□ -1.35
CCDC39-201ENST00000442201 RAI1Q7Z5J4 1906 aaPredicted RBP6.62□□□□□ -1.35
CCDC39-201ENST00000442201 IGHV4-39P01824 125 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 OR5G3P0C626 314 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 GNB2P62879 340 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 IAH1Q2TAA2 248 aaPredicted RBP6.62□□□□□ -1.35
CCDC39-201ENST00000442201 LRRC37A5PQ49AS3 106 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 CT45A1Q5HYN5 189 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 SELENOHQ8IZQ5 122 aaKnown RBP6.62□□□□□ -1.35
CCDC39-201ENST00000442201 ZNF525Q8N782 197 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 CT45A3Q8NHU0 189 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 C18orf12Q96KH6 178 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 C2orf50Q96LR7 162 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 IFI27L2Q9H2X8 130 aa6.62□□□□□ -1.35
CCDC39-201ENST00000442201 H0YIZ8 118 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 K7ERU9 68 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 TSPAN15O95858 294 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 ZNF134P52741 427 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 LDLRAD2Q5SZI1 272 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 ZNF66Q6ZN08 573 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 S100A7AQ86SG5 101 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 OR4C5Q8NGB2 326 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 DCUN1D4Q92564 292 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 IL22RA2Q969J5 263 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 OR10C1Q96KK4 312 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 HSD17B10Q99714 261 aaKnown RBP6.61□□□□□ -1.35
CCDC39-201ENST00000442201 PPIAL4CA0A0B4J2A2 164 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 DUXBA0A1W2PPF3 345 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 PPIAL4GP0DN37 164 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 SLAQ13239 276 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 MIDNQ504T8 468 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 ZNF439Q8NDP4 499 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms