RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 SSX9Q7RTT3 188 aa5.89□□□□□ -1.47
CD44-211ENST00000442151 NR2C2APQ86WQ0 139 aa5.89□□□□□ -1.47
CD44-211ENST00000442151 OR52B4Q8NGK2 314 aa5.89□□□□□ -1.47
CD44-211ENST00000442151 OR5H2Q8NGV7 314 aa5.89□□□□□ -1.47
CD44-211ENST00000442151 C15orf40Q8WUR7 153 aa5.89□□□□□ -1.47
CD44-211ENST00000442151 QTRT1Q9BXR0 403 aaKnown RBP5.89□□□□□ -1.47
CD44-211ENST00000442151 C6orf62Q9GZU0 229 aaPredicted RBP5.89□□□□□ -1.47
CD44-211ENST00000442151 ZC4H2Q9NQZ6 224 aa5.89□□□□□ -1.47
CD44-211ENST00000442151 ELF5Q9UKW6 265 aaPredicted RBP5.89□□□□□ -1.47
CD44-211ENST00000442151 PRNDQ9UKY0 176 aa5.89□□□□□ -1.47
CD44-211ENST00000442151 IGLV11-55A0A075B6I3 123 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 SULT1C2O00338 296 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 UBE2CO00762 179 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 EREGO14944 169 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 NDUFB8O95169 186 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 IGLV2-14P01704 120 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 TRBV12-3P01733 135 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 PRH1P02810 166 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 CLEC3BP05452 202 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 CD5P06127 495 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 F2RP25116 425 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 TSPAN5P62079 268 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 NEDD8Q15843 81 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 SLC25A24Q6NUK1 477 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 HAPLN4Q86UW8 402 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 TMEM17Q86X19 198 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 VKORC1L1Q8N0U8 176 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 THAP7Q9BT49 309 aaPredicted RBP5.88□□□□□ -1.47
CD44-211ENST00000442151 SCPEP1Q9HB40 452 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 EHFQ9NZC4 300 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 ADAM30Q9UKF2 790 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 LOC102724200A0A096LPH7 203 aaPredicted RBP5.88□□□□□ -1.47
CD44-211ENST00000442151 ZNF785A8K8V0 405 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 A8MWP6 167 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 GPR31O00270 319 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 TNFSF12O43508 249 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 SCGB2A1O75556 95 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 APOC4P55056 127 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 OR2B8PP59922 312 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 C10orf55Q5SWW7 151 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 MZT2AQ6P582 158 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 OR2C3Q8N628 320 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 UXS1Q8NBZ7 420 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 OR5H6Q8NGV6 325 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 BSCL2Q96G97 398 aaPredicted RBP5.88□□□□□ -1.47
CD44-211ENST00000442151 FANCD2OSQ96PS1 177 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 C5orf66Q9H5L9 145 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 SRD5A3Q9H8P0 318 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 EDA2RQ9HAV5 297 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 TMEM140Q9NV12 185 aa5.88□□□□□ -1.47
CD44-211ENST00000442151 LCE6AA0A183 80 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 PPP5D1E7EU14 171 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 K7EMT4 169 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 TNFAIP8O95379 198 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 SERPINE2P07093 398 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 NAT1P18440 290 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 RELQ04864 619 aaPredicted RBP5.87□□□□□ -1.47
CD44-211ENST00000442151 LINC00322Q6ZN03 302 aaPredicted RBP5.87□□□□□ -1.47
CD44-211ENST00000442151 TMEM217Q8N7C4 229 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 GVQW1Q8N7I0 195 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 OR5B3Q8NH48 314 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 OR51H1Q8NH63 302 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 LSM10Q969L4 123 aaKnown RBP5.87□□□□□ -1.47
CD44-211ENST00000442151 MOB3AQ96BX8 217 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 DGCR14Q96DF8 476 aaKnown RBP5.87□□□□□ -1.47
CD44-211ENST00000442151 TXN2Q99757 166 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 SPAG8Q99932 426 aaPredicted RBP5.87□□□□□ -1.47
CD44-211ENST00000442151 ZNF2Q9BSG1 426 aaPredicted RBP5.87□□□□□ -1.47
CD44-211ENST00000442151 GGTLC1Q9BX51 225 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 HIPK2Q9H2X6 1198 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 PLEKHA3Q9HB20 300 aa5.87□□□□□ -1.47
CD44-211ENST00000442151 IZUMO1RA6ND01 250 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 NDUFA4O00483 81 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 PGLYRP1O75594 196 aaPredicted RBP5.86□□□□□ -1.47
CD44-211ENST00000442151 APOA1P02647 267 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 CLEC2LP0C7M8 214 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 C8orf88P0DMB2 117 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 OR13C7P0DN81 318 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 AREGP15514 252 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 RPA2P15927 270 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 LPAR6P43657 344 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 UCP3P55916 312 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 PAFAH1B2P68402 229 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 ERHP84090 104 aaKnown RBP5.86□□□□□ -1.47
CD44-211ENST00000442151 DEFA5Q01523 94 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 ZNF585BQ52M93 769 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 ZFAND6Q6FIF0 208 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 ZNF818PQ6ZRF7 136 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 SAMD12Q8N8I0 201 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 GDPD1Q8N9F7 314 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 OR4A16Q8NH70 328 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 ZNF502Q8TBZ5 544 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 SLC25A38Q96DW6 304 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 ZNF436Q9C0F3 470 aaPredicted RBP5.86□□□□□ -1.47
CD44-211ENST00000442151 OR51B2Q9Y5P1 312 aa5.86□□□□□ -1.47
CD44-211ENST00000442151 TEX50A0A1B0GTY4 177 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 OR4C46A6NHA9 309 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 NUPL2O15504 423 aaKnown RBP5.85□□□□□ -1.47
CD44-211ENST00000442151 TGOLN2O43493 480 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 PMP2P02689 132 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms