RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 C22orf39Q6P5X5 142 aa8.58□□□□□ -1.04
SYNE2-206ENST00000441438 TMEM91Q6ZNR0 172 aa8.58□□□□□ -1.04
SYNE2-206ENST00000441438 MRGPREQ86SM8 312 aa8.58□□□□□ -1.04
SYNE2-206ENST00000441438 GNB1LQ9BYB4 327 aa8.58□□□□□ -1.04
SYNE2-206ENST00000441438 TCEAL2Q9H3H9 227 aaPredicted RBP8.58□□□□□ -1.04
SYNE2-206ENST00000441438 ARID1BQ8NFD5 2236 aaPredicted RBP8.58□□□□□ -1.04
SYNE2-206ENST00000441438 SCN3AQ9NY46 2000 aa8.58□□□□□ -1.04
SYNE2-206ENST00000441438 A0A0G2JNJ9 132 aa8.58□□□□□ -1.04
SYNE2-206ENST00000441438 C2CD4DB7Z1M9 353 aa8.58□□□□□ -1.04
SYNE2-206ENST00000441438 MRPS12O15235 138 aaKnown RBP8.58□□□□□ -1.04
SYNE2-206ENST00000441438 SGPP2Q8IWX5 399 aa8.58□□□□□ -1.04
SYNE2-206ENST00000441438 OR52R1Q8NGF1 315 aa8.58□□□□□ -1.04
SYNE2-206ENST00000441438 Q9UFV3 132 aa8.58□□□□□ -1.04
SYNE2-206ENST00000441438 SPTBP11277 2137 aa8.58□□□□□ -1.04
SYNE2-206ENST00000441438 RIIAD1A6NNX1 92 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 FFAR1O14842 300 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 NDUFC2O95298 119 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 ELK1P19419 428 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 COA6Q5JTJ3 125 aaKnown RBP8.57□□□□□ -1.04
SYNE2-206ENST00000441438 KCNIP2Q9NS61 270 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 MDFICQ9P1T7 246 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 IER3IP1Q9Y5U9 82 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 J3QQQ9 107 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 IGHMP01871 453 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 HNRNPA3P51991 378 aaKnown RBP8.57□□□□□ -1.04
SYNE2-206ENST00000441438 SMIM11AP58511 58 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 LY6G5CQ5SRR4 150 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 SLC35E4Q6ICL7 350 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 TCEANCQ8N8B7 351 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 TRAV26-2A0A0B4J265 109 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 IGLC7A0M8Q6 106 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 F5H697 171 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 CDC42EP2O14613 210 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 TIAF1O95411 115 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 LAGE3Q14657 143 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 TRPT1Q86TN4 253 aaKnown RBP8.57□□□□□ -1.04
SYNE2-206ENST00000441438 CIARTQ8N365 385 aaPredicted RBP8.57□□□□□ -1.04
SYNE2-206ENST00000441438 OR5AK2Q8NH90 309 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 PNPLA2Q96AD5 504 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 NTMQ9P121 344 aa8.57□□□□□ -1.04
SYNE2-206ENST00000441438 CACNA1IQ9P0X4 2223 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 K7ESM1 405 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 REM1O75628 298 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 ZFAND5O76080 213 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 CFPP27918 469 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 GUCA1AP43080 201 aaPredicted RBP8.56□□□□□ -1.04
SYNE2-206ENST00000441438 TGIF1Q15583 401 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 SFTPA1Q8IWL2 248 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 DLX4Q92988 240 aaPredicted RBP8.56□□□□□ -1.04
SYNE2-206ENST00000441438 TMEM147Q9BVK8 224 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 PROCRQ9UNN8 238 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 DUS4LO95620 317 aaKnown RBP8.56□□□□□ -1.04
SYNE2-206ENST00000441438 SPINT3P49223 89 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 LIM2P55344 173 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 CAV3P56539 151 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 Q6AWC8 147 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 SFRP4Q6FHJ7 346 aaPredicted RBP8.56□□□□□ -1.04
SYNE2-206ENST00000441438 SFTPA2Q8IWL1 248 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 SSC4DQ8WTU2 575 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 MBD6Q96DN6 1003 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 RPS10P5Q9NQ39 176 aa8.56□□□□□ -1.04
SYNE2-206ENST00000441438 OR2T8A6NH00 312 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 OVOL1O14753 267 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 PRDX1Q06830 199 aaKnown RBP8.55□□□□□ -1.04
SYNE2-206ENST00000441438 HMGN3Q15651 99 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 ZNF471Q9BX82 626 aaPredicted RBP8.55□□□□□ -1.04
SYNE2-206ENST00000441438 RERGLQ9H628 205 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 MTFP1Q9UDX5 166 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 TRPM6Q9BX84 2022 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 BDP1A6H8Y1 2624 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 ALPK2Q86TB3 2170 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 HIST1H1DP16402 221 aaKnown RBP8.55□□□□□ -1.04
SYNE2-206ENST00000441438 OR5D14Q8NGL3 314 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 ZNF417Q8TAU3 575 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 VOPP1Q96AW1 172 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 ARRDC1-AS1Q9H2J1 176 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 TRGV10A0A0A0MS01 117 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 GGT3PA6NGU5 568 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 GGTLC3B5MD39 225 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 GSTZ1O43708 216 aaPredicted RBP8.55□□□□□ -1.04
SYNE2-206ENST00000441438 HRASP01112 189 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 KRASP01116 189 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 NGFP01138 241 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 PGA4P0DJD7 388 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 SUB1P53999 127 aaKnown RBP eCLIP8.55□□□□□ -1.04
SYNE2-206ENST00000441438 ENDOGQ14249 297 aaKnown RBP8.55□□□□□ -1.04
SYNE2-206ENST00000441438 TMEM18Q96B42 140 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 AP1S3Q96PC3 154 aa8.55□□□□□ -1.04
SYNE2-206ENST00000441438 ZNF318Q5VUA4 2279 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 TECTAO75443 2155 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 TRAV5A0A0B4J249 113 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 FAM236AA0A1B0GUQ0 79 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 FAM236BA0A1B0GV22 79 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 LY6LH3BQJ8 138 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 HOXA3O43365 443 aaPredicted RBP8.54□□□□□ -1.04
SYNE2-206ENST00000441438 IGHA1P01876 353 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 PGA5P0DJD9 388 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 KLRD1Q13241 179 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 VAX1Q5SQQ9 334 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 TMEM14EPQ6UXP3 125 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms