RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 OR51B2Q9Y5P1 312 aa18.38■□□□□ 0.53
CPNE1-217ENST00000439669 S4R3C0 116 aa18.38■□□□□ 0.53
CPNE1-217ENST00000439669 TEX50A0A1B0GTY4 177 aa18.37■□□□□ 0.53
CPNE1-217ENST00000439669 IGHV3-23P01764 117 aa18.37■□□□□ 0.53
CPNE1-217ENST00000439669 SERPINE2P07093 398 aa18.37■□□□□ 0.53
CPNE1-217ENST00000439669 CD69Q07108 199 aa18.37■□□□□ 0.53
CPNE1-217ENST00000439669 CADM3Q8N126 398 aa18.37■□□□□ 0.53
CPNE1-217ENST00000439669 ZFAND1Q8TCF1 268 aa18.37■□□□□ 0.53
CPNE1-217ENST00000439669 MRGPRFQ96AM1 343 aa18.37■□□□□ 0.53
CPNE1-217ENST00000439669 TSC22D3Q99576 134 aa18.37■□□□□ 0.53
CPNE1-217ENST00000439669 COPZ2Q9P299 210 aa18.37■□□□□ 0.53
CPNE1-217ENST00000439669 RSL24D1Q9UHA3 163 aaKnown RBP18.37■□□□□ 0.53
CPNE1-217ENST00000439669 IGLV11-55A0A075B6I3 123 aa18.36■□□□□ 0.53
CPNE1-217ENST00000439669 PPP5D1E7EU14 171 aa18.36■□□□□ 0.53
CPNE1-217ENST00000439669 PTBP1P26599 531 aaKnown RBP eCLIP18.36■□□□□ 0.53
CPNE1-217ENST00000439669 H2BFWTQ7Z2G1 175 aa18.36■□□□□ 0.53
CPNE1-217ENST00000439669 HSD17B13Q7Z5P4 300 aaPredicted RBP18.36■□□□□ 0.53
CPNE1-217ENST00000439669 OR13C8Q8NGS7 320 aa18.36■□□□□ 0.53
CPNE1-217ENST00000439669 EEF1AKMT3Q96AZ1 226 aa18.36■□□□□ 0.53
CPNE1-217ENST00000439669 DISC1C4P0D8 188 aa18.35■□□□□ 0.53
CPNE1-217ENST00000439669 H0Y980 276 aa18.35■□□□□ 0.53
CPNE1-217ENST00000439669 IGKV1-39P01597 117 aa18.35■□□□□ 0.53
CPNE1-217ENST00000439669 IGKV1D-39P04432 117 aa18.35■□□□□ 0.53
CPNE1-217ENST00000439669 AKAIN1P0CW23 69 aa18.35■□□□□ 0.53
CPNE1-217ENST00000439669 OR13C7P0DN81 318 aa18.35■□□□□ 0.53
CPNE1-217ENST00000439669 TNFSF8P32971 234 aa18.35■□□□□ 0.53
CPNE1-217ENST00000439669 CLEC19AQ6UXS0 136 aa18.35■□□□□ 0.53
CPNE1-217ENST00000439669 CCDC71LQ8N9Z2 235 aa18.35■□□□□ 0.53
CPNE1-217ENST00000439669 MARCH1Q8TCQ1 289 aa18.35■□□□□ 0.53
CPNE1-217ENST00000439669 LSM10Q969L4 123 aaKnown RBP18.35■□□□□ 0.53
CPNE1-217ENST00000439669 SEC22AQ96IW7 307 aa18.35■□□□□ 0.53
CPNE1-217ENST00000439669 NXF2Q9GZY0 626 aaKnown RBP18.35■□□□□ 0.53
CPNE1-217ENST00000439669 NDUFA4L2Q9NRX3 87 aa18.35■□□□□ 0.53
CPNE1-217ENST00000439669 FKBP11Q9NYL4 201 aa18.35■□□□□ 0.53
CPNE1-217ENST00000439669 LSM4Q9Y4Z0 139 aaKnown RBP18.35■□□□□ 0.53
CPNE1-217ENST00000439669 FABP12A6NFH5 140 aa18.34■□□□□ 0.53
CPNE1-217ENST00000439669 C15orf61A6NNL5 157 aa18.34■□□□□ 0.53
CPNE1-217ENST00000439669 CYB5BO43169 146 aa18.34■□□□□ 0.53
CPNE1-217ENST00000439669 GP9P14770 177 aa18.34■□□□□ 0.53
CPNE1-217ENST00000439669 MECP2P51608 486 aaKnown RBP18.34■□□□□ 0.53
CPNE1-217ENST00000439669 KLK9Q2XQG4 91 aa18.34■□□□□ 0.53
CPNE1-217ENST00000439669 GDPD1Q8N9F7 314 aa18.34■□□□□ 0.53
CPNE1-217ENST00000439669 OR4C16Q8NGL9 310 aa18.34■□□□□ 0.53
CPNE1-217ENST00000439669 OR5B3Q8NH48 314 aa18.34■□□□□ 0.53
CPNE1-217ENST00000439669 CCDC140Q96MF4 163 aa18.34■□□□□ 0.53
CPNE1-217ENST00000439669 TP53RKQ96S44 253 aa18.34■□□□□ 0.53
CPNE1-217ENST00000439669 B9D2Q9BPU9 175 aa18.34■□□□□ 0.53
CPNE1-217ENST00000439669 PEMTQ9UBM1 199 aa18.34■□□□□ 0.53
CPNE1-217ENST00000439669 KLK9Q9UKQ9 250 aa18.34■□□□□ 0.53
CPNE1-217ENST00000439669 SORL1Q92673 2214 aa18.33■□□□□ 0.53
CPNE1-217ENST00000439669 C3orf85A0A1B0GTC6 90 aa18.33■□□□□ 0.52
CPNE1-217ENST00000439669 MFSD2BA6NFX1 497 aa18.33■□□□□ 0.52
CPNE1-217ENST00000439669 GSTZ1O43708 216 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-217ENST00000439669 GGCTO75223 188 aaKnown RBP18.33■□□□□ 0.52
CPNE1-217ENST00000439669 IGLV1-51P01701 117 aa18.33■□□□□ 0.52
CPNE1-217ENST00000439669 WT1-ASQ06250 92 aa18.33■□□□□ 0.52
CPNE1-217ENST00000439669 IL34Q6ZMJ4 242 aa18.33■□□□□ 0.52
CPNE1-217ENST00000439669 OR4A16Q8NH70 328 aa18.33■□□□□ 0.52
CPNE1-217ENST00000439669 CXorf58Q96LI9 332 aa18.33■□□□□ 0.52
CPNE1-217ENST00000439669 TMEM14BQ9NUH8 114 aa18.33■□□□□ 0.52
CPNE1-217ENST00000439669 THYN1Q9P016 225 aa18.33■□□□□ 0.52
CPNE1-217ENST00000439669 C14orf166Q9Y224 244 aaKnown RBP18.33■□□□□ 0.52
CPNE1-217ENST00000439669 DBX1A6NMT0 343 aa18.32■□□□□ 0.52
CPNE1-217ENST00000439669 HLA-AP01891 365 aaKnown RBP18.32■□□□□ 0.52
CPNE1-217ENST00000439669 CTSDP07339 412 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-217ENST00000439669 ARL3P36405 182 aa18.32■□□□□ 0.52
CPNE1-217ENST00000439669 TRIM16LQ309B1 348 aa18.32■□□□□ 0.52
CPNE1-217ENST00000439669 TMEM56Q96MV1 263 aa18.32■□□□□ 0.52
CPNE1-217ENST00000439669 RBM38Q9H0Z9 239 aaKnown RBP18.32■□□□□ 0.52
CPNE1-217ENST00000439669 DMRT1Q9Y5R6 373 aa18.32■□□□□ 0.52
CPNE1-217ENST00000439669 TRBV7-1A0A0A6YYK4 115 aa18.31■□□□□ 0.52
CPNE1-217ENST00000439669 OR2C1O95371 312 aa18.31■□□□□ 0.52
CPNE1-217ENST00000439669 CSN3P07498 182 aa18.31■□□□□ 0.52
CPNE1-217ENST00000439669 AKR1C2P52895 323 aa18.31■□□□□ 0.52
CPNE1-217ENST00000439669 SP6Q3SY56 376 aa18.31■□□□□ 0.52
CPNE1-217ENST00000439669 SLC25A24Q6NUK1 477 aa18.31■□□□□ 0.52
CPNE1-217ENST00000439669 SMAD5-AS1Q9Y6J3 95 aa18.31■□□□□ 0.52
CPNE1-217ENST00000439669 ANKRD20A5PA0PJZ0 165 aa18.3■□□□□ 0.52
CPNE1-217ENST00000439669 PRRT1Q99946 306 aa18.3■□□□□ 0.52
CPNE1-217ENST00000439669 SOSTQ9BQB4 213 aa18.3■□□□□ 0.52
CPNE1-217ENST00000439669 F11RQ9Y624 299 aaKnown RBP18.3■□□□□ 0.52
CPNE1-217ENST00000439669 ATG12O94817 140 aa18.29■□□□□ 0.52
CPNE1-217ENST00000439669 S100A5P33763 92 aa18.29■□□□□ 0.52
CPNE1-217ENST00000439669 IZUMO4Q1ZYL8 232 aa18.29■□□□□ 0.52
CPNE1-217ENST00000439669 OR51S1Q8NGJ8 323 aa18.29■□□□□ 0.52
CPNE1-217ENST00000439669 ZC4H2Q9NQZ6 224 aa18.29■□□□□ 0.52
CPNE1-217ENST00000439669 TEX13DA0A0J9YY54 714 aaPredicted RBP18.28■□□□□ 0.52
CPNE1-217ENST00000439669 IGKV1-5P01602 117 aa18.28■□□□□ 0.52
CPNE1-217ENST00000439669 CLEC3BP05452 202 aa18.28■□□□□ 0.52
CPNE1-217ENST00000439669 GPR183P32249 361 aa18.28■□□□□ 0.52
CPNE1-217ENST00000439669 SURF2Q15527 256 aaPredicted RBP18.28■□□□□ 0.52
CPNE1-217ENST00000439669 RNASE11Q8TAA1 199 aaKnown RBP18.28■□□□□ 0.52
CPNE1-217ENST00000439669 ZNF502Q8TBZ5 544 aa18.28■□□□□ 0.52
CPNE1-217ENST00000439669 MCUBQ9NWR8 336 aa18.28■□□□□ 0.52
CPNE1-217ENST00000439669 SIGLEC8Q9NYZ4 499 aa18.28■□□□□ 0.52
CPNE1-217ENST00000439669 UCP1P25874 307 aa18.27■□□□□ 0.52
CPNE1-217ENST00000439669 PYDC2Q56P42 97 aa18.27■□□□□ 0.52
CPNE1-217ENST00000439669 C11orf87Q6NUJ2 197 aa18.27■□□□□ 0.52
CPNE1-217ENST00000439669 DYNLRB2Q8TF09 96 aa18.27■□□□□ 0.52
CPNE1-217ENST00000439669 RTBDNQ9BSG5 229 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms