RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 CBLN4Q9NTU7 201 aa12.62□□□□□ -0.39
APP-208ENST00000439274 TMEM14BQ9NUH8 114 aa12.62□□□□□ -0.39
APP-208ENST00000439274 ZNRD1Q9P1U0 126 aa12.62□□□□□ -0.39
APP-208ENST00000439274 TNCP24821 2201 aa12.62□□□□□ -0.39
APP-208ENST00000439274 FTH1P19P0C7X4 201 aa12.61□□□□□ -0.39
APP-208ENST00000439274 KIR2DS2P43631 304 aa12.61□□□□□ -0.39
APP-208ENST00000439274 DEFB108BQ8NET1 73 aa12.61□□□□□ -0.39
APP-208ENST00000439274 FAM216AQ8WUB2 273 aa12.61□□□□□ -0.39
APP-208ENST00000439274 BTF3L4Q96K17 158 aa12.61□□□□□ -0.39
APP-208ENST00000439274 ENY2Q9NPA8 101 aa12.61□□□□□ -0.39
APP-208ENST00000439274 NAGKQ9UJ70 344 aa12.61□□□□□ -0.39
APP-208ENST00000439274 FOXA2Q9Y261 457 aaPredicted RBP12.61□□□□□ -0.39
APP-208ENST00000439274 GATA2P23769 480 aaPredicted RBP12.61□□□□□ -0.39
APP-208ENST00000439274 LINC00310P59036 64 aa12.61□□□□□ -0.39
APP-208ENST00000439274 BEND2Q8NDZ0 799 aa12.61□□□□□ -0.39
APP-208ENST00000439274 CMTM2Q8TAZ6 248 aa12.61□□□□□ -0.39
APP-208ENST00000439274 LRFN3Q9BTN0 628 aa12.61□□□□□ -0.39
APP-208ENST00000439274 IL36BQ9NZH7 164 aa12.61□□□□□ -0.39
APP-208ENST00000439274 F2Z2F3 143 aa12.6□□□□□ -0.39
APP-208ENST00000439274 MMP23AO75900 390 aa12.6□□□□□ -0.39
APP-208ENST00000439274 LINC00869P0C866 280 aa12.6□□□□□ -0.39
APP-208ENST00000439274 MRPS11P82912 194 aaKnown RBP12.6□□□□□ -0.39
APP-208ENST00000439274 EAF1Q96JC9 268 aaPredicted RBP12.6□□□□□ -0.39
APP-208ENST00000439274 MRPL18Q9H0U6 180 aaKnown RBP12.6□□□□□ -0.39
APP-208ENST00000439274 TP53TG5Q9Y2B4 290 aa12.6□□□□□ -0.39
APP-208ENST00000439274 OR51B2Q9Y5P1 312 aa12.6□□□□□ -0.39
APP-208ENST00000439274 TRAV17A0A0B4J275 112 aa12.6□□□□□ -0.39
APP-208ENST00000439274 LHBP01229 141 aa12.6□□□□□ -0.39
APP-208ENST00000439274 RPL29P47914 159 aaKnown RBP12.6□□□□□ -0.39
APP-208ENST00000439274 RAB7AP51149 207 aa12.6□□□□□ -0.39
APP-208ENST00000439274 PRR20EP86478 221 aa12.6□□□□□ -0.39
APP-208ENST00000439274 PRR20CP86479 221 aa12.6□□□□□ -0.39
APP-208ENST00000439274 PRR20DP86480 221 aa12.6□□□□□ -0.39
APP-208ENST00000439274 PRR20BP86481 221 aa12.6□□□□□ -0.39
APP-208ENST00000439274 PRR20AP86496 221 aa12.6□□□□□ -0.39
APP-208ENST00000439274 KRTCAP3Q53RY4 240 aa12.6□□□□□ -0.39
APP-208ENST00000439274 ATG101Q9BSB4 218 aa12.6□□□□□ -0.39
APP-208ENST00000439274 KBTBD11-OT1A0A1B0GTJ5 212 aa12.59□□□□□ -0.39
APP-208ENST00000439274 ZNF705FA8MVS1 300 aaPredicted RBP12.59□□□□□ -0.39
APP-208ENST00000439274 ZNF705DP0CH99 300 aaPredicted RBP12.59□□□□□ -0.39
APP-208ENST00000439274 ZNF705BP0CI00 300 aaPredicted RBP12.59□□□□□ -0.39
APP-208ENST00000439274 CFHR2P36980 270 aa12.59□□□□□ -0.39
APP-208ENST00000439274 IER3P46695 156 aa12.59□□□□□ -0.39
APP-208ENST00000439274 KLF3P57682 345 aaPredicted RBP12.59□□□□□ -0.39
APP-208ENST00000439274 PSG5Q15238 335 aa12.59□□□□□ -0.39
APP-208ENST00000439274 RPRMLQ8N4K4 120 aa12.59□□□□□ -0.39
APP-208ENST00000439274 OR1L6Q8NGR2 347 aa12.59□□□□□ -0.39
APP-208ENST00000439274 SNRNP40Q96DI7 357 aaKnown RBP12.59□□□□□ -0.39
APP-208ENST00000439274 IGKV1OR2-108A0A075B7D4 117 aa12.59□□□□□ -0.39
APP-208ENST00000439274 SPINK4O60575 86 aa12.59□□□□□ -0.39
APP-208ENST00000439274 IGKV1-16P04430 117 aa12.59□□□□□ -0.39
APP-208ENST00000439274 CRYBB3P26998 211 aa12.59□□□□□ -0.39
APP-208ENST00000439274 ERVFC1-1P60608 527 aa12.59□□□□□ -0.39
APP-208ENST00000439274 RAB31Q13636 194 aa12.59□□□□□ -0.39
APP-208ENST00000439274 MLANAQ16655 118 aa12.59□□□□□ -0.39
APP-208ENST00000439274 Q6ZWC4 215 aa12.59□□□□□ -0.39
APP-208ENST00000439274 ZCCHC14Q8WYQ9 949 aaKnown RBP12.59□□□□□ -0.39
APP-208ENST00000439274 C11orf52Q96A22 123 aa12.59□□□□□ -0.39
APP-208ENST00000439274 TBX15Q96SF7 602 aa12.59□□□□□ -0.39
APP-208ENST00000439274 DMXL1Q9Y485 3027 aa12.59□□□□□ -0.39
APP-208ENST00000439274 DSCAML1Q8TD84 2053 aa12.58□□□□□ -0.39
APP-208ENST00000439274 TRGV10A0A0A0MS01 117 aa12.58□□□□□ -0.4
APP-208ENST00000439274 SERF1AO75920 110 aa12.58□□□□□ -0.4
APP-208ENST00000439274 LBHQ53QV2 105 aaPredicted RBP12.58□□□□□ -0.4
APP-208ENST00000439274 NEUROG1Q92886 237 aa12.58□□□□□ -0.4
APP-208ENST00000439274 UHRF2Q96PU4 802 aa12.58□□□□□ -0.4
APP-208ENST00000439274 SNHG12Q9BXW3 62 aa12.58□□□□□ -0.4
APP-208ENST00000439274 YLPM1P49750 1951 aaKnown RBP12.58□□□□□ -0.4
APP-208ENST00000439274 SRRM4A7MD48 611 aaKnown RBP12.58□□□□□ -0.4
APP-208ENST00000439274 J3QR06 171 aa12.58□□□□□ -0.4
APP-208ENST00000439274 MT-CO2P00403 227 aa12.58□□□□□ -0.4
APP-208ENST00000439274 LGALS4P56470 323 aa12.58□□□□□ -0.4
APP-208ENST00000439274 SELENOTP62341 195 aa12.58□□□□□ -0.4
APP-208ENST00000439274 TDRG1Q3Y452 100 aa12.58□□□□□ -0.4
APP-208ENST00000439274 CENPWQ5EE01 88 aa12.58□□□□□ -0.4
APP-208ENST00000439274 ZNF474Q6S9Z5 364 aaPredicted RBP12.58□□□□□ -0.4
APP-208ENST00000439274 IGFL2Q6UWQ7 119 aa12.58□□□□□ -0.4
APP-208ENST00000439274 DOLPP1Q86YN1 238 aa12.58□□□□□ -0.4
APP-208ENST00000439274 MMD2Q8IY49 270 aa12.58□□□□□ -0.4
APP-208ENST00000439274 OR8I2Q8N0Y5 310 aa12.58□□□□□ -0.4
APP-208ENST00000439274 CCL13Q99616 98 aa12.58□□□□□ -0.4
APP-208ENST00000439274 NABP2Q9BQ15 211 aa12.58□□□□□ -0.4
APP-208ENST00000439274 PLCE1Q9P212 2302 aa12.58□□□□□ -0.4
APP-208ENST00000439274 RP1L1Q8IWN7 2480 aaPredicted RBP12.58□□□□□ -0.4
APP-208ENST00000439274 C9JCJ5 164 aa12.57□□□□□ -0.4
APP-208ENST00000439274 FCN1O00602 326 aa12.57□□□□□ -0.4
APP-208ENST00000439274 CRISP2P16562 243 aa12.57□□□□□ -0.4
APP-208ENST00000439274 C1orf194Q5T5A4 169 aa12.57□□□□□ -0.4
APP-208ENST00000439274 FAM216BQ8N7L0 139 aa12.57□□□□□ -0.4
APP-208ENST00000439274 ZNF439Q8NDP4 499 aa12.57□□□□□ -0.4
APP-208ENST00000439274 ZNF503Q96F45 646 aa12.57□□□□□ -0.4
APP-208ENST00000439274 DCAF16Q9NXF7 216 aa12.57□□□□□ -0.4
APP-208ENST00000439274 SLC45A2Q9UMX9 530 aa12.57□□□□□ -0.4
APP-208ENST00000439274 V9GYV3 84 aa12.57□□□□□ -0.4
APP-208ENST00000439274 RAI1Q7Z5J4 1906 aaPredicted RBP12.57□□□□□ -0.4
APP-208ENST00000439274 OR10J4P0C629 311 aa12.57□□□□□ -0.4
APP-208ENST00000439274 OR10J1P30954 320 aa12.57□□□□□ -0.4
APP-208ENST00000439274 DEFB109BQ30KR1 87 aa12.57□□□□□ -0.4
APP-208ENST00000439274 PQLC2Q6ZP29 291 aa12.57□□□□□ -0.4
APP-208ENST00000439274 RNASE7Q9H1E1 156 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms