RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 OR10W1Q8NGF6 305 aa13.9□□□□□ -0.18
AC004540.1-201ENST00000439120 OR52B4Q8NGK2 314 aa13.9□□□□□ -0.18
AC004540.1-201ENST00000439120 OR1L8Q8NGR8 309 aa13.9□□□□□ -0.18
AC004540.1-201ENST00000439120 HINT2Q9BX68 163 aa13.9□□□□□ -0.18
AC004540.1-201ENST00000439120 WFDC10AQ9H1F0 79 aa13.9□□□□□ -0.18
AC004540.1-201ENST00000439120 RETNQ9HD89 108 aa13.9□□□□□ -0.18
AC004540.1-201ENST00000439120 ANAPC10Q9UM13 185 aa13.9□□□□□ -0.18
AC004540.1-201ENST00000439120 KRASP01116 189 aa13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 OR13C7P0DN81 318 aa13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 PTBP1P26599 531 aaKnown RBP eCLIP13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 LPAR6P43657 344 aa13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 ANKRD55Q3KP44 614 aa13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 SLC25A24Q6NUK1 477 aa13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 BTNL8Q6UX41 500 aa13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 TMEM61Q8N0U2 210 aa13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 ZNF502Q8TBZ5 544 aa13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 MARC2Q969Z3 335 aa13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 DGCR14Q96DF8 476 aaKnown RBP13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 FAM110AQ9BQ89 295 aa13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 HIPK2Q9H2X6 1198 aa13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 MLXQ9UH92 298 aa13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 UFC1Q9Y3C8 167 aa13.89□□□□□ -0.19
AC004540.1-201ENST00000439120 TEX50A0A1B0GTY4 177 aa13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 GPR31O00270 319 aa13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 SCAF4O95104 1147 aaKnown RBP13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 SERPINE2P07093 398 aa13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 NAT1P18440 290 aa13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 HLA-DMAP28067 261 aa13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 HRH1P35367 487 aa13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 TSPAN5P62079 268 aa13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 TM4SF20Q53R12 229 aa13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 LINC00322Q6ZN03 302 aaPredicted RBP13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 RBPMS2Q6ZRY4 209 aaKnown RBP13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 VN1R17PQ8TDU5 208 aa13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 SLC25A46Q96AG3 418 aa13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 FXYD6Q9H0Q3 95 aa13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 COMMD3Q9UBI1 195 aa13.88□□□□□ -0.19
AC004540.1-201ENST00000439120 IGHV3-35A0A0C4DH35 117 aa13.87□□□□□ -0.19
AC004540.1-201ENST00000439120 RBMY1BA6NDE4 496 aaKnown RBP13.87□□□□□ -0.19
AC004540.1-201ENST00000439120 RBMY1EA6NEQ0 496 aaKnown RBP13.87□□□□□ -0.19
AC004540.1-201ENST00000439120 RBMY1DP0C7P1 496 aaKnown RBP13.87□□□□□ -0.19
AC004540.1-201ENST00000439120 G6PCP35575 357 aa13.87□□□□□ -0.19
AC004540.1-201ENST00000439120 ZNF585BQ52M93 769 aa13.87□□□□□ -0.19
AC004540.1-201ENST00000439120 LPCAT3Q6P1A2 487 aa13.87□□□□□ -0.19
AC004540.1-201ENST00000439120 UNQ9165/PRO28630Q6UXU0 137 aa13.87□□□□□ -0.19
AC004540.1-201ENST00000439120 IL17DQ8TAD2 202 aa13.87□□□□□ -0.19
AC004540.1-201ENST00000439120 FCAMRQ8WWV6 532 aa13.87□□□□□ -0.19
AC004540.1-201ENST00000439120 LSM10Q969L4 123 aaKnown RBP13.87□□□□□ -0.19
AC004540.1-201ENST00000439120 OR51B2Q9Y5P1 312 aa13.87□□□□□ -0.19
AC004540.1-201ENST00000439120 LCE6AA0A183 80 aa13.86□□□□□ -0.19
AC004540.1-201ENST00000439120 OR2T8A6NH00 312 aa13.86□□□□□ -0.19
AC004540.1-201ENST00000439120 TGOLN2O43493 480 aa13.86□□□□□ -0.19
AC004540.1-201ENST00000439120 EIF4EP06730 217 aaKnown RBP13.86□□□□□ -0.19
AC004540.1-201ENST00000439120 ELLP55199 621 aaPredicted RBP13.86□□□□□ -0.19
AC004540.1-201ENST00000439120 WT1-ASQ06250 92 aa13.86□□□□□ -0.19
AC004540.1-201ENST00000439120 PHLDA2Q53GA4 152 aa13.86□□□□□ -0.19
AC004540.1-201ENST00000439120 TMEM56Q96MV1 263 aa13.86□□□□□ -0.19
AC004540.1-201ENST00000439120 TSC22D3Q99576 134 aa13.86□□□□□ -0.19
AC004540.1-201ENST00000439120 FKBP11Q9NYL4 201 aa13.86□□□□□ -0.19
AC004540.1-201ENST00000439120 MRPL27Q9P0M9 148 aaKnown RBP13.86□□□□□ -0.19
AC004540.1-201ENST00000439120 PRNDQ9UKY0 176 aa13.86□□□□□ -0.19
AC004540.1-201ENST00000439120 NSG2Q9Y328 171 aa13.86□□□□□ -0.19
AC004540.1-201ENST00000439120 APOA1P02647 267 aa13.85□□□□□ -0.19
AC004540.1-201ENST00000439120 NCS1P62166 190 aa13.85□□□□□ -0.19
AC004540.1-201ENST00000439120 SNX29P2Q8IUI4 249 aa13.85□□□□□ -0.19
AC004540.1-201ENST00000439120 LYSMD2Q8IV50 215 aa13.85□□□□□ -0.19
AC004540.1-201ENST00000439120 OR1L6Q8NGR2 347 aa13.85□□□□□ -0.19
AC004540.1-201ENST00000439120 BSCL2Q96G97 398 aaPredicted RBP13.85□□□□□ -0.19
AC004540.1-201ENST00000439120 SCPEP1Q9HB40 452 aa13.85□□□□□ -0.19
AC004540.1-201ENST00000439120 NDUFA4L2Q9NRX3 87 aa13.85□□□□□ -0.19
AC004540.1-201ENST00000439120 GAR1Q9NY12 217 aaKnown RBP13.85□□□□□ -0.19
AC004540.1-201ENST00000439120 F11RQ9Y624 299 aaKnown RBP13.85□□□□□ -0.19
AC004540.1-201ENST00000439120 TRAV25A0A0B4J276 109 aa13.84□□□□□ -0.19
AC004540.1-201ENST00000439120 SPSB3Q6PJ21 355 aa13.84□□□□□ -0.19
AC004540.1-201ENST00000439120 SLC38A6Q8IZM9 456 aa13.84□□□□□ -0.19
AC004540.1-201ENST00000439120 UBAC2Q8NBM4 344 aa13.84□□□□□ -0.19
AC004540.1-201ENST00000439120 OR5B3Q8NH48 314 aa13.84□□□□□ -0.19
AC004540.1-201ENST00000439120 GPX8Q8TED1 209 aa13.84□□□□□ -0.19
AC004540.1-201ENST00000439120 FUNDC2Q9BWH2 189 aa13.84□□□□□ -0.19
AC004540.1-201ENST00000439120 GGTLC1Q9BX51 225 aa13.84□□□□□ -0.19
AC004540.1-201ENST00000439120 ZNF436Q9C0F3 470 aaPredicted RBP13.84□□□□□ -0.19
AC004540.1-201ENST00000439120 C21orf62Q9NYP8 219 aa13.84□□□□□ -0.19
AC004540.1-201ENST00000439120 IGHV3-21A0A0B4J1V1 117 aa13.83□□□□□ -0.2
AC004540.1-201ENST00000439120 C8orf88P0DMB2 117 aa13.83□□□□□ -0.2
AC004540.1-201ENST00000439120 RCVRNP35243 200 aa13.83□□□□□ -0.2
AC004540.1-201ENST00000439120 VBP1P61758 197 aa13.83□□□□□ -0.2
AC004540.1-201ENST00000439120 Q56UQ5 140 aa13.83□□□□□ -0.2
AC004540.1-201ENST00000439120 CADM3Q8N126 398 aa13.83□□□□□ -0.2
AC004540.1-201ENST00000439120 TMEM190Q8WZ59 177 aa13.83□□□□□ -0.2
AC004540.1-201ENST00000439120 CMTM3Q96MX0 182 aa13.83□□□□□ -0.2
AC004540.1-201ENST00000439120 DAZ1Q9NQZ3 744 aaKnown RBP13.83□□□□□ -0.2
AC004540.1-201ENST00000439120 LOC102724200A0A096LPH7 203 aaPredicted RBP13.82□□□□□ -0.2
AC004540.1-201ENST00000439120 LAMTOR1Q6IAA8 161 aa13.82□□□□□ -0.2
AC004540.1-201ENST00000439120 TBC1D26Q86UD7 250 aa13.82□□□□□ -0.2
AC004540.1-201ENST00000439120 OR4A16Q8NH70 328 aa13.82□□□□□ -0.2
AC004540.1-201ENST00000439120 ATP6V0BQ99437 205 aa13.82□□□□□ -0.2
AC004540.1-201ENST00000439120 C20orf24Q9BUV8 137 aa13.82□□□□□ -0.2
AC004540.1-201ENST00000439120 C5orf66Q9H5L9 145 aa13.82□□□□□ -0.2
AC004540.1-201ENST00000439120 FAM212BQ9NTI7 297 aaPredicted RBP13.82□□□□□ -0.2
AC004540.1-201ENST00000439120 TENM2Q9NT68 2774 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms