RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 MAS1P04201 325 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 SERPINE1P05121 402 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 IGKV4-1P06312 121 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 MMP7P09237 267 aaPredicted RBP1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 GZMAP12544 262 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 GFAPP14136 432 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 OGNP20774 298 aaKnown RBP1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 CXCR1P25024 350 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 FKBP2P26885 142 aaKnown RBP1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 IL3RAP26951 378 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 GALR1P47211 349 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 IDH2P48735 452 aaKnown RBP1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 OR12D2P58182 307 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 MTPNP58546 118 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 RPS11P62280 158 aaKnown RBP eCLIP1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 HAMPP81172 84 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 RPL18AQ02543 176 aaKnown RBP1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 BTN1A1Q13410 526 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 NDUFAF6Q330K2 333 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 SLC48A1Q6P1K1 146 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 FAM131AQ6UXB0 335 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 MTERF4Q7Z6M4 381 aaKnown RBP1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 DAZ4Q86SG3 579 aaKnown RBP1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 LINC00596Q86U02 117 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 PDPNQ86YL7 162 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 DEFB125Q8N687 156 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 LINC00469Q8N7U9 141 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 SLC25A29Q8N8R3 303 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 ZIC4Q8N9L1 334 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 CYB561A3Q8NBI2 242 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 ZNF680Q8NEM1 530 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 ZNF675Q8TD23 568 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 KLF14Q8TD94 323 aaPredicted RBP1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 C4orf3Q8WVX3 66 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 TNFRSF14Q92956 283 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 DDIT4LQ96D03 193 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 FAM19A4Q96LR4 140 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 SEC22CQ9BRL7 303 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 TAPBPLQ9BX59 468 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 ALX4Q9H161 411 aaPredicted RBP1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 NCOR1P1Q9H4R4 102 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 ARMC7Q9H6L4 198 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 DAZ1Q9NQZ3 744 aaKnown RBP1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 TAS2R13Q9NYV9 303 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 LINC00527Q9UJ94 153 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 RAB22AQ9UL26 194 aa1.65□□□□□ -2.15
HMGB3P12-201ENST00000438745 TRAV8-6A0A0B4J262 113 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 IGKV1-6A0A0C4DH72 117 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 A0A1W2PQD3 144 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 OR11H12B2RN74 326 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 M0QZK8 103 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 M0R1W7 72 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 NDUFB3O43676 98 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 OR7C2O60412 319 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 UPK1BO75841 260 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 FSTL3O95633 263 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 SNAP29O95721 258 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 IGKV1-39P01597 117 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 IGKV1D-16P01601 117 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 MBP02144 154 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 IGKV1D-39P04432 117 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 KLK1P06870 262 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 SRMP19623 302 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 AQP5P55064 265 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 GRB2P62993 217 aaKnown RBP1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 DYNC1I2Q13409 638 aaKnown RBP1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 C1DQ13901 141 aaKnown RBP1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 HES1Q14469 280 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 TSNQ15631 228 aaKnown RBP1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 UAP1Q16222 522 aaPredicted RBP1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 MAPK14Q16539 360 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 ZNF181Q2M3W8 571 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 C18orf21Q32NC0 220 aaPredicted RBP1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 SP6Q3SY56 376 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 HHATQ5VTY9 493 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 C8orf74Q6P047 294 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 LINC00322Q6ZN03 302 aaPredicted RBP1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 TMEM136Q6ZRR5 245 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 PAGE2Q7Z2X7 111 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 SLC7A5P1Q8MH63 180 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 OR5AS1Q8N127 324 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 FBXO36Q8NEA4 188 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 C1orf64Q8NEQ6 169 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 NDNFQ8TB73 568 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 TMEM106AQ96A25 262 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 ZNF75AQ96N20 296 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 C1orf50Q9BV19 199 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 NDEL1Q9GZM8 345 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 IL22Q9GZX6 179 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 IFNKQ9P0W0 207 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 VAX2Q9UIW0 290 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 DNAH6Q9C0G6 4158 aa1.64□□□□□ -2.15
HMGB3P12-201ENST00000438745 SORL1Q92673 2214 aa1.63□□□□□ -2.15
HMGB3P12-201ENST00000438745 TRAV10A0A0B4J240 114 aa1.63□□□□□ -2.15
HMGB3P12-201ENST00000438745 TRAV8-4A0A0B4J246 113 aa1.63□□□□□ -2.15
HMGB3P12-201ENST00000438745 C5orf49A4QMS7 147 aa1.63□□□□□ -2.15
HMGB3P12-201ENST00000438745 H3BSA7 217 aa1.63□□□□□ -2.15
HMGB3P12-201ENST00000438745 J3QT63 122 aa1.63□□□□□ -2.15
HMGB3P12-201ENST00000438745 APOC4-APOC2K7ER74 178 aa1.63□□□□□ -2.15
HMGB3P12-201ENST00000438745 STK16O75716 305 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms