RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 RPL12P30050 165 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 OR10J1P30954 320 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 CD200P41217 278 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 TAS2R45P59539 299 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 HLA-DRB3P79483 266 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 FABP5Q01469 135 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 EBPQ15125 230 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 ZNF181Q2M3W8 571 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 TMEM176BQ3YBM2 270 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 COQ5Q5HYK3 327 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 LRRN1Q6UXK5 716 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 COMMD7Q86VX2 200 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 BAP18Q8IXM2 172 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 RNF133Q8WVZ7 376 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 TESCQ96BS2 214 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 MND1Q9BWT6 205 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 SPZ1Q9BXG8 430 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 C16orf95Q9H693 158 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 HHLA2Q9UM44 414 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 MMACHCQ9Y4U1 282 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 FER1L6Q2WGJ9 1857 aa1.59□□□□□ -2.16
TRAPPC13-204ENST00000438419 DOT1LQ8TEK3 1739 aa1.59□□□□□ -2.16
TRAPPC13-204ENST00000438419 IFT172Q9UG01 1749 aa1.59□□□□□ -2.16
TRAPPC13-204ENST00000438419 DMDP11532 3685 aa1.59□□□□□ -2.16
TRAPPC13-204ENST00000438419 MRC1P22897 1456 aa1.59□□□□□ -2.16
TRAPPC13-204ENST00000438419 CREBBPQ92793 2442 aa1.59□□□□□ -2.16
TRAPPC13-204ENST00000438419 ANKRD36BQ8N2N9 1353 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 A0A0J9YX75 114 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 DHRS12A0PJE2 317 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 C21orf140B9A014 251 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 M0R381 172 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 E2F6O75461 281 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 REG1AP05451 166 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 IL3P08700 152 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 ZNF7P17097 686 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 SERPINB10P48595 397 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 TMEM33P57088 247 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 KRTAP12-4P60329 112 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 MAGOHP61326 146 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 ITGB3BPQ13352 177 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 JOSD1Q15040 202 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 N4BP2L1Q5TBK1 243 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 RASSF6Q6ZTQ3 369 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 OR4C16Q8NGL9 310 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 C16orf78Q8WTQ4 265 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 RAB8BQ92930 207 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 OR52B2Q96RD2 323 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 TMEM109Q9BVC6 243 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 C11orf1Q9H5F2 150 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 HES4Q9HCC6 221 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 SLC2A9Q9NRM0 540 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 EMC3Q9P0I2 261 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 DKKL1Q9UK85 242 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 POLR1DQ9Y2S0 133 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 ZNF337Q9Y3M9 751 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 PCYT1BQ9Y5K3 369 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 NF1P21359 2839 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 RELNP78509 3460 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 IQGAP3Q86VI3 1631 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 NBEAL1Q6ZS30 2694 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 FLT4P35916 1363 aa1.58□□□□□ -2.16
TRAPPC13-204ENST00000438419 UBE2L6O14933 153 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 CCL5P13501 91 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 CRYBB3P26998 211 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 BLVRBP30043 206 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 FUSP35637 526 aaKnown RBP eCLIP1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 AP2S1P53680 142 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 MYL6P60660 151 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 SNAP25P60880 206 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 RPS24P62847 133 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 SLC51BQ86UW2 128 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 C10orf67Q8IYJ2 551 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 C1orf174Q8IYL3 243 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 LRRC34Q8IZ02 419 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 TMEM161BQ8NDZ6 487 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 PHOSPHO2Q8TCD6 241 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 PTH2Q96A98 100 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 STACQ99469 402 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 PARD6GQ9BYG4 376 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 TXNL4BQ9NX01 149 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 BABAM2Q9NXR7 383 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 CCL26Q9Y258 94 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 BCORQ6W2J9 1755 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 DLEC1Q9Y238 1755 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 NYNRINQ9P2P1 1898 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 CEP162Q5TB80 1403 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 COL5A3P25940 1745 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 DNHD1Q96M86 4753 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 RP1L1Q8IWN7 2480 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 MYO3BQ8WXR4 1341 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 VPS13AQ96RL7 3174 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 TMED7-TICAM2A0A0A6YYA0 188 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 ODF3BA8MYP8 253 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 SLC17A3O00476 420 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 UBFD1O14562 309 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 TGOLN2O43493 480 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 AHSA1O95433 338 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 ISG15P05161 165 aa1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 CSRP1P21291 193 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-204ENST00000438419 NPPCP23582 126 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms