RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 GATAD1Q8WUU5 269 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 NPFFO15130 113 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 TMEM30BQ3MIR4 351 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 PET117Q6UWS5 81 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 RCC1LQ96I51 464 aaKnown RBP14.47□□□□□ -0.09
PTPRF-209ENST00000438120 GEMIN7Q9H840 131 aaKnown RBP14.47□□□□□ -0.09
PTPRF-209ENST00000438120 NBEAP1P0C6P0 100 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 OR10AG1Q8NH19 301 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 KIR2DL4Q99706 377 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 OTOFQ9HC10 1997 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 A0A0G2JK05 382 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 GAGE10A6NGK3 116 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 NHLRC3Q5JS37 347 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 WDR82Q6UXN9 313 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 NRXN2Q9P2S2 1712 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 TEX45Q8NA69 505 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 PLPPR1Q8TBJ4 325 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 TM2D1Q9BX74 207 aa14.47□□□□□ -0.09
PTPRF-209ENST00000438120 FOLR2P14207 255 aa14.46□□□□□ -0.09
PTPRF-209ENST00000438120 RTBDNQ9BSG5 229 aaPredicted RBP14.46□□□□□ -0.09
PTPRF-209ENST00000438120 C19orf24Q9BVV8 132 aa14.46□□□□□ -0.09
PTPRF-209ENST00000438120 OSR1Q8TAX0 266 aaPredicted RBP14.46□□□□□ -0.09
PTPRF-209ENST00000438120 MARVELD3Q96A59 401 aa14.46□□□□□ -0.09
PTPRF-209ENST00000438120 GP6Q9HCN6 339 aa14.46□□□□□ -0.09
PTPRF-209ENST00000438120 ZNF646O15015 1829 aaPredicted RBP14.46□□□□□ -0.09
PTPRF-209ENST00000438120 ARPC1AQ92747 370 aa14.46□□□□□ -0.09
PTPRF-209ENST00000438120 SDHCQ99643 169 aaPredicted RBP14.46□□□□□ -0.09
PTPRF-209ENST00000438120 LY6DQ14210 128 aa14.46□□□□□ -0.09
PTPRF-209ENST00000438120 DEPPQ9NTK1 212 aa14.46□□□□□ -0.09
PTPRF-209ENST00000438120 TBX6O95947 436 aaPredicted RBP14.46□□□□□ -0.1
PTPRF-209ENST00000438120 LHX2P50458 406 aa14.46□□□□□ -0.1
PTPRF-209ENST00000438120 RAB9AP51151 201 aa14.46□□□□□ -0.1
PTPRF-209ENST00000438120 SUMO2P61956 95 aaKnown RBP14.46□□□□□ -0.1
PTPRF-209ENST00000438120 TMEM160Q9NX00 188 aa14.46□□□□□ -0.1
PTPRF-209ENST00000438120 PRB4P10163 310 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-209ENST00000438120 SCGB1A1P11684 91 aa14.45□□□□□ -0.1
PTPRF-209ENST00000438120 ABCA7Q8IZY2 2146 aa14.45□□□□□ -0.1
PTPRF-209ENST00000438120 C17orf100A8MU93 164 aa14.45□□□□□ -0.1
PTPRF-209ENST00000438120 FABP2P12104 132 aa14.45□□□□□ -0.1
PTPRF-209ENST00000438120 SCO2A0A1W2PP80 73 aa14.45□□□□□ -0.1
PTPRF-209ENST00000438120 PMCHL1Q16048 86 aa14.45□□□□□ -0.1
PTPRF-209ENST00000438120 C21orf62Q9NYP8 219 aa14.45□□□□□ -0.1
PTPRF-209ENST00000438120 NEU4Q8WWR8 484 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-209ENST00000438120 IGLV3-19P01714 112 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 YAE1D1Q9NRH1 226 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 PINLYPA6NC86 204 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 HTN3P15516 51 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 OR13C6PQ8NH95 151 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 TM4SF5O14894 197 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 HLA-DRB1P01911 266 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 HBBP68871 147 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 LINC00114Q6XXX2 140 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 KCNS1Q96KK3 526 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 IMMP2LQ96T52 175 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 A0A1B0GTI1 187 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 ATP5G3P48201 142 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 SLC25A34Q6PIV7 304 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 MIR17HGQ75NE6 70 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 WNT10AQ9GZT5 417 aa14.44□□□□□ -0.1
PTPRF-209ENST00000438120 COTL1Q14019 142 aa14.43□□□□□ -0.1
PTPRF-209ENST00000438120 C1orf162Q8NEQ5 155 aaPredicted RBP14.43□□□□□ -0.1
PTPRF-209ENST00000438120 DUX3Q96PT4 197 aa14.43□□□□□ -0.1
PTPRF-209ENST00000438120 TUBGCP6Q96RT7 1819 aa14.43□□□□□ -0.1
PTPRF-209ENST00000438120 RNASE4P34096 147 aaKnown RBP14.43□□□□□ -0.1
PTPRF-209ENST00000438120 SAPCD1Q5SSQ6 148 aa14.43□□□□□ -0.1
PTPRF-209ENST00000438120 TMEM170BQ5T4T1 132 aa14.43□□□□□ -0.1
PTPRF-209ENST00000438120 GLMPQ8WWB7 406 aa14.43□□□□□ -0.1
PTPRF-209ENST00000438120 PSMG3Q9BT73 122 aaPredicted RBP14.43□□□□□ -0.1
PTPRF-209ENST00000438120 BRWD3Q6RI45 1802 aa14.43□□□□□ -0.1
PTPRF-209ENST00000438120 CXorf65A6NEN9 183 aa14.43□□□□□ -0.1
PTPRF-209ENST00000438120 ALPK2Q86TB3 2170 aa14.43□□□□□ -0.1
PTPRF-209ENST00000438120 ZDBF2Q9HCK1 2354 aa14.43□□□□□ -0.1
PTPRF-209ENST00000438120 IQCF6A8MYZ5 107 aa14.43□□□□□ -0.1
PTPRF-209ENST00000438120 CD8AP01732 235 aa14.43□□□□□ -0.1
PTPRF-209ENST00000438120 HIST1H2BAQ96A08 127 aa14.43□□□□□ -0.1
PTPRF-209ENST00000438120 SAA2-SAA4A0A096LPE2 208 aa14.42□□□□□ -0.1
PTPRF-209ENST00000438120 NPIPB7O75200 414 aa14.42□□□□□ -0.1
PTPRF-209ENST00000438120 SAA2P0DJI9 122 aaPredicted RBP14.42□□□□□ -0.1
PTPRF-209ENST00000438120 CIRBPQ14011 172 aaKnown RBP14.42□□□□□ -0.1
PTPRF-209ENST00000438120 TRAV8-6A0A0B4J262 113 aa14.42□□□□□ -0.1
PTPRF-209ENST00000438120 LDLRAD4O15165 306 aa14.42□□□□□ -0.1
PTPRF-209ENST00000438120 OR52E5Q8NH55 327 aa14.42□□□□□ -0.1
PTPRF-209ENST00000438120 WBP1Q96G27 269 aa14.42□□□□□ -0.1
PTPRF-209ENST00000438120 CBLN4Q9NTU7 201 aa14.42□□□□□ -0.1
PTPRF-209ENST00000438120 SELENOKQ9Y6D0 94 aa14.42□□□□□ -0.1
PTPRF-209ENST00000438120 UQCR10Q9UDW1 63 aa14.42□□□□□ -0.1
PTPRF-209ENST00000438120 PQLC2LA1A4F0 135 aa14.42□□□□□ -0.1
PTPRF-209ENST00000438120 SNAI2O43623 268 aa14.42□□□□□ -0.1
PTPRF-209ENST00000438120 SAA1P0DJI8 122 aaPredicted RBP14.42□□□□□ -0.1
PTPRF-209ENST00000438120 SCN10AQ9Y5Y9 1956 aa14.42□□□□□ -0.1
PTPRF-209ENST00000438120 LEMD1Q68G75 181 aa14.41□□□□□ -0.1
PTPRF-209ENST00000438120 LYZL4Q96KX0 146 aa14.41□□□□□ -0.1
PTPRF-209ENST00000438120 ASIPP42127 132 aa14.41□□□□□ -0.1
PTPRF-209ENST00000438120 TNFRSF18Q9Y5U5 241 aa14.41□□□□□ -0.1
PTPRF-209ENST00000438120 LRRC37AA6NMS7 1700 aa14.41□□□□□ -0.1
PTPRF-209ENST00000438120 UCP1P25874 307 aa14.41□□□□□ -0.1
PTPRF-209ENST00000438120 COLCA1Q6ZS62 124 aa14.41□□□□□ -0.1
PTPRF-209ENST00000438120 SPRR3Q9UBC9 169 aa14.41□□□□□ -0.1
PTPRF-209ENST00000438120 NUTF2P61970 127 aaKnown RBP14.41□□□□□ -0.1
PTPRF-209ENST00000438120 C11orf44Q8N8P7 122 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms