RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 USP9YO00507 2555 aaPredicted RBP7.79□□□□□ -1.16
CUX1-206ENST00000437600 IGLV3-9A0A075B6K5 115 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 MGST3O14880 152 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 ADIPOQQ15848 244 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 C17orf58Q2M2W7 97 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 TMEM41BQ5BJD5 291 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 FAM169BQ8N8A8 192 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 ST6GALNAC3Q8NDV1 305 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 YPEL4Q96NS1 127 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 S1PR3Q99500 378 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 IFI27L2Q9H2X8 130 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 RPH3ALQ9UNE2 315 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 SAA2-SAA4A0A096LPE2 208 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 HBE1P02100 147 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 SAA2P0DJI9 122 aaPredicted RBP7.78□□□□□ -1.16
CUX1-206ENST00000437600 CCL3L1P16619 93 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 GATA2P23769 480 aaPredicted RBP7.78□□□□□ -1.16
CUX1-206ENST00000437600 CA7P43166 264 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 ADORA2A-AS1P86434 159 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 DIAPH2-AS1Q14236 149 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 CST9LP1Q5W188 147 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 MIC13Q5XKP0 118 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 WDR73Q6P4I2 378 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 SNX22Q96L94 193 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 SMIM7Q9BQ49 75 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 DERL1Q9BUN8 251 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 OR6C3Q9NZP0 311 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 GOLT1BQ9Y3E0 138 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 DOPEY2Q9Y3R5 2298 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 GOSR1O95249 250 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 CD1BP29016 333 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 ZNF709Q8N972 641 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 TMEM170AQ8WVE7 144 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 PACRGQ96M98 296 aaPredicted RBP7.78□□□□□ -1.16
CUX1-206ENST00000437600 HSD17B10Q99714 261 aaKnown RBP7.78□□□□□ -1.16
CUX1-206ENST00000437600 SIRT7Q9NRC8 400 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 TMEM140Q9NV12 185 aa7.78□□□□□ -1.16
CUX1-206ENST00000437600 SRRM4A7MD48 611 aaKnown RBP7.77□□□□□ -1.17
CUX1-206ENST00000437600 LYNX1G3V0Z9 82 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 RAB29O14966 203 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 LHBP01229 141 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 ADH4P08319 380 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 LYNX1P0DP58 116 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 MAS1LP35410 378 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 SERF2P84101 59 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 ELOVL1Q9BW60 279 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 A0A1B0GW64 132 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 APELAP0DMC3 54 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 PRSS8Q16651 343 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 TCF23Q7RTU1 214 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 ZBTB34Q8NCN2 500 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 MBD3L1Q8WWY6 194 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 VKORC1Q9BQB6 163 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 RNF7Q9UBF6 113 aa7.77□□□□□ -1.17
CUX1-206ENST00000437600 ACTL6BO94805 426 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 NPPCP23582 126 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 ATP5G3P48201 142 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 MRPS11P82912 194 aaKnown RBP7.76□□□□□ -1.17
CUX1-206ENST00000437600 HTD2P86397 168 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 MEF2BQ02080 365 aaPredicted RBP7.76□□□□□ -1.17
CUX1-206ENST00000437600 H1FXQ92522 213 aaKnown RBP7.76□□□□□ -1.17
CUX1-206ENST00000437600 TMEM147Q9BVK8 224 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 MS4A5Q9H3V2 200 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 CISD1Q9NZ45 108 aaKnown RBP7.76□□□□□ -1.17
CUX1-206ENST00000437600 VAX2Q9UIW0 290 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.76□□□□□ -1.17
CUX1-206ENST00000437600 EREGO14944 169 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 FCN3O75636 299 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 HPRT1P00492 218 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 TRGC1P0CF51 173 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 ZNF25P17030 456 aaPredicted RBP7.76□□□□□ -1.17
CUX1-206ENST00000437600 RELBQ01201 579 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 ASPHD1Q5U4P2 390 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 LYPD2Q6UXB3 125 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 ZNF66Q6ZN08 573 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 LHFPL4Q7Z7J7 247 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 OR10W1Q8NGF6 305 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 PSMG3Q9BT73 122 aaPredicted RBP7.76□□□□□ -1.17
CUX1-206ENST00000437600 SDF2L1Q9HCN8 221 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 TUBG2Q9NRH3 451 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 RAI1Q7Z5J4 1906 aaPredicted RBP7.76□□□□□ -1.17
CUX1-206ENST00000437600 FBN2P35556 2912 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 ELOA3CA0A087WX78 387 aaPredicted RBP7.76□□□□□ -1.17
CUX1-206ENST00000437600 FOXH1O75593 365 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 SPATA31B1PQ5VZV4 182 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 OR4A47Q6IF82 309 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 TREML4Q6UXN2 200 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 Q8N7P7 452 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 ABHD5Q8WTS1 349 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 SEPSECSQ9HD40 501 aaKnown RBP7.76□□□□□ -1.17
CUX1-206ENST00000437600 ELOVL5Q9NYP7 299 aa7.76□□□□□ -1.17
CUX1-206ENST00000437600 KBTBD11-OT1A0A1B0GTJ5 212 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 FAM90A26D6RGX4 464 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 YPEL1O60688 119 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 LY6HO94772 140 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 CHRNA7P36544 502 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 FAM3BP58499 235 aaPredicted RBP7.75□□□□□ -1.17
CUX1-206ENST00000437600 RBX1P62877 108 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 PPP1R35Q8TAP8 253 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 IGFBPL1Q8WX77 278 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms