RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 MGAT4CQ9UBM8 478 aa13.18□□□□□ -0.3
CALD1-209ENST00000436461 RNF114Q9Y508 228 aa13.18□□□□□ -0.3
CALD1-209ENST00000436461 TRAV41A0A0B4J266 112 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 A0A1W2PN81 502 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 TRAPPC2P0DI81 140 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 TRAPPC2BP0DI82 140 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 CXCL3P19876 107 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 CHRNA7P36544 502 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 FCN2Q15485 313 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 Q6ZNX1 250 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 OR5T1Q8NG75 326 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 OR5M8Q8NGP6 311 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 OR5B3Q8NH48 314 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 SPIN2AQ99865 258 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 SPIN2BQ9BPZ2 258 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 COA4Q9NYJ1 87 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 hCG_2014768A0A024R1R8 64 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 IGLC7A0M8Q6 106 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 CLPSL1A2RUU4 121 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 SOX15O60248 233 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 SCGB1D2O95969 90 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 FGF2P09038 288 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 H2BFSP57053 126 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 PRCDQ00LT1 54 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 WT1-ASQ06250 92 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 GSG1LQ6UXU4 331 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 KLHDC1Q8N7A1 406 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 ZBTB8BQ8NAP8 495 aaPredicted RBP13.17□□□□□ -0.3
CALD1-209ENST00000436461 OR11H7Q8NGC8 314 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 OR4D5Q8NGN0 318 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 MAGT1Q9H0U3 335 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 MED28Q9H204 178 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 ZNF257Q9Y2Q1 563 aa13.17□□□□□ -0.3
CALD1-209ENST00000436461 A0A1B0GVG6 124 aa13.16□□□□□ -0.3
CALD1-209ENST00000436461 PRH1P02810 166 aa13.16□□□□□ -0.3
CALD1-209ENST00000436461 SLC25A6P12236 298 aa13.16□□□□□ -0.3
CALD1-209ENST00000436461 TNFRSF9Q07011 255 aa13.16□□□□□ -0.3
CALD1-209ENST00000436461 AARDQ4LEZ3 155 aa13.16□□□□□ -0.3
CALD1-209ENST00000436461 C19orf54Q5BKX5 351 aa13.16□□□□□ -0.3
CALD1-209ENST00000436461 LCNL1Q6ZST4 164 aa13.16□□□□□ -0.3
CALD1-209ENST00000436461 WNT10AQ9GZT5 417 aa13.16□□□□□ -0.3
CALD1-209ENST00000436461 PSMB11A5LHX3 300 aa13.15□□□□□ -0.3
CALD1-209ENST00000436461 CEBPZOSA8MTT3 80 aa13.15□□□□□ -0.3
CALD1-209ENST00000436461 OR13C7P0DN81 318 aa13.15□□□□□ -0.3
CALD1-209ENST00000436461 PPIFP30405 207 aaKnown RBP13.15□□□□□ -0.3
CALD1-209ENST00000436461 HOXA1P49639 335 aaPredicted RBP13.15□□□□□ -0.3
CALD1-209ENST00000436461 CRIP2P52943 208 aaPredicted RBP13.15□□□□□ -0.3
CALD1-209ENST00000436461 SPCS3P61009 180 aa13.15□□□□□ -0.3
CALD1-209ENST00000436461 RRAS2P62070 204 aaPredicted RBP13.15□□□□□ -0.3
CALD1-209ENST00000436461 DEFA5Q01523 94 aa13.15□□□□□ -0.3
CALD1-209ENST00000436461 CFHR3Q02985 330 aa13.15□□□□□ -0.3
CALD1-209ENST00000436461 CENPVQ7Z7K6 275 aaPredicted RBP13.15□□□□□ -0.3
CALD1-209ENST00000436461 C11orf44Q8N8P7 122 aa13.15□□□□□ -0.3
CALD1-209ENST00000436461 C2orf50Q96LR7 162 aa13.15□□□□□ -0.3
CALD1-209ENST00000436461 RBKSQ9H477 322 aa13.15□□□□□ -0.3
CALD1-209ENST00000436461 PLEKHA3Q9HB20 300 aa13.15□□□□□ -0.3
CALD1-209ENST00000436461 HSPB7Q9UBY9 170 aa13.15□□□□□ -0.3
CALD1-209ENST00000436461 TMEM89A2RUT3 159 aa13.14□□□□□ -0.31
CALD1-209ENST00000436461 IAPPP10997 89 aa13.14□□□□□ -0.31
CALD1-209ENST00000436461 PROK1P58294 105 aa13.14□□□□□ -0.31
CALD1-209ENST00000436461 POLR2GP62487 172 aaKnown RBP eCLIP13.14□□□□□ -0.31
CALD1-209ENST00000436461 SRSF4Q08170 494 aaKnown RBP13.14□□□□□ -0.31
CALD1-209ENST00000436461 TMEM267Q0VDI3 215 aaPredicted RBP13.14□□□□□ -0.31
CALD1-209ENST00000436461 AKIRIN2Q53H80 203 aa13.14□□□□□ -0.31
CALD1-209ENST00000436461 AWAT1Q58HT5 328 aa13.14□□□□□ -0.31
CALD1-209ENST00000436461 OR52E5Q8NH55 327 aa13.14□□□□□ -0.31
CALD1-209ENST00000436461 NKX2-1P43699 371 aaPredicted RBP13.13□□□□□ -0.31
CALD1-209ENST00000436461 KRTAP10-3P60369 221 aa13.13□□□□□ -0.31
CALD1-209ENST00000436461 FOXL1Q12952 345 aa13.13□□□□□ -0.31
CALD1-209ENST00000436461 MS4A10Q96PG2 267 aa13.13□□□□□ -0.31
CALD1-209ENST00000436461 MBPP02686 304 aaPredicted RBP13.13□□□□□ -0.31
CALD1-209ENST00000436461 PSMB6P28072 239 aa13.13□□□□□ -0.31
CALD1-209ENST00000436461 LRRC37A5PQ49AS3 106 aa13.13□□□□□ -0.31
CALD1-209ENST00000436461 OR5AU1Q8NGC0 362 aa13.13□□□□□ -0.31
CALD1-209ENST00000436461 KLK15Q9H2R5 256 aa13.13□□□□□ -0.31
CALD1-209ENST00000436461 ZNF355PQ9NSJ1 428 aa13.13□□□□□ -0.31
CALD1-209ENST00000436461 WRBO00258 174 aa13.12□□□□□ -0.31
CALD1-209ENST00000436461 SSSCA1O60232 199 aa13.12□□□□□ -0.31
CALD1-209ENST00000436461 FBXO24O75426 580 aa13.12□□□□□ -0.31
CALD1-209ENST00000436461 CTRB1P17538 263 aa13.12□□□□□ -0.31
CALD1-209ENST00000436461 ID3Q02535 119 aa13.12□□□□□ -0.31
CALD1-209ENST00000436461 PDLIM3Q53GG5 364 aaPredicted RBP13.12□□□□□ -0.31
CALD1-209ENST00000436461 CTRB2Q6GPI1 263 aa13.12□□□□□ -0.31
CALD1-209ENST00000436461 TTC9CQ8N5M4 171 aa13.12□□□□□ -0.31
CALD1-209ENST00000436461 FAM110DQ8TAY7 271 aaPredicted RBP13.12□□□□□ -0.31
CALD1-209ENST00000436461 DTD1Q8TEA8 209 aa13.12□□□□□ -0.31
CALD1-209ENST00000436461 WIPF2Q8TF74 440 aaPredicted RBP13.12□□□□□ -0.31
CALD1-209ENST00000436461 TMEM158Q8WZ71 300 aa13.12□□□□□ -0.31
CALD1-209ENST00000436461 ENY2Q9NPA8 101 aa13.12□□□□□ -0.31
CALD1-209ENST00000436461 ZNF580Q9UK33 172 aa13.12□□□□□ -0.31
CALD1-209ENST00000436461 LSM5Q9Y4Y9 91 aaKnown RBP13.12□□□□□ -0.31
CALD1-209ENST00000436461 DMRT1Q9Y5R6 373 aa13.12□□□□□ -0.31
CALD1-209ENST00000436461 S100A10P60903 97 aa13.11□□□□□ -0.31
CALD1-209ENST00000436461 SLC35B1P78383 322 aa13.11□□□□□ -0.31
CALD1-209ENST00000436461 IL15RAQ13261 267 aa13.11□□□□□ -0.31
CALD1-209ENST00000436461 RAB32Q13637 225 aa13.11□□□□□ -0.31
CALD1-209ENST00000436461 TCTEX1D4Q5JR98 221 aa13.11□□□□□ -0.31
CALD1-209ENST00000436461 OR2C3Q8N628 320 aa13.11□□□□□ -0.31
CALD1-209ENST00000436461 CHAC2Q8WUX2 184 aa13.11□□□□□ -0.31
CALD1-209ENST00000436461 HEYLQ9NQ87 328 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms