RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 KLK9Q2XQG4 91 aa13.9□□□□□ -0.18
HMGN1-207ENST00000436324 DYNLRB2Q8TF09 96 aa13.9□□□□□ -0.18
HMGN1-207ENST00000436324 C15orf40Q8WUR7 153 aa13.9□□□□□ -0.18
HMGN1-207ENST00000436324 NDUFA4L2Q9NRX3 87 aa13.9□□□□□ -0.18
HMGN1-207ENST00000436324 SIGLEC8Q9NYZ4 499 aa13.9□□□□□ -0.18
HMGN1-207ENST00000436324 KLK9Q9UKQ9 250 aa13.9□□□□□ -0.18
HMGN1-207ENST00000436324 PRNDQ9UKY0 176 aa13.9□□□□□ -0.18
HMGN1-207ENST00000436324 SELENOKQ9Y6D0 94 aa13.9□□□□□ -0.18
HMGN1-207ENST00000436324 IGHV3-21A0A0B4J1V1 117 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 ZNF320A2RRD8 509 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 DBX1A6NMT0 343 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 IGKV1-39P01597 117 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 IGKV1D-39P04432 117 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 CLEC3BP05452 202 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 SERPINE2P07093 398 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 FGF2P09038 288 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 MECP2P51608 486 aaKnown RBP13.89□□□□□ -0.19
HMGN1-207ENST00000436324 SCGB2B2Q4G0G5 96 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 THOC7Q6I9Y2 204 aaKnown RBP13.89□□□□□ -0.19
HMGN1-207ENST00000436324 LCN12Q6JVE5 192 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 Q8N402 240 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 GDPD1Q8N9F7 314 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 TMEM229BQ8NBD8 167 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 DYNC2LI1Q8TCX1 351 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 MRGPRFQ96AM1 343 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 CXorf58Q96LI9 332 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 WWC2-AS2Q96NR7 200 aa13.89□□□□□ -0.19
HMGN1-207ENST00000436324 TRBV7-1A0A0A6YYK4 115 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 C2orf70A6NJV1 201 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 NOL3O60936 208 aaKnown RBP13.88□□□□□ -0.19
HMGN1-207ENST00000436324 TPPPO94811 219 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 RAB3DO95716 219 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 IGHV4-30-4P0DP06 118 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 GPR183P32249 361 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 RPL5P46777 297 aaKnown RBP13.88□□□□□ -0.19
HMGN1-207ENST00000436324 TMBIM6P55061 237 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 PIGPP57054 158 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 TAS2R19P59542 299 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 CD300EQ496F6 205 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-207ENST00000436324 H2BFWTQ7Z2G1 175 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 LHFPL1Q86WI0 220 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 SGPP2Q8IWX5 399 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 ARRDC1Q8N5I2 433 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 LSM10Q969L4 123 aaKnown RBP13.88□□□□□ -0.19
HMGN1-207ENST00000436324 DIRAS2Q96HU8 199 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 SEC22AQ96IW7 307 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 THYN1Q9P016 225 aa13.88□□□□□ -0.19
HMGN1-207ENST00000436324 CCDC59Q9P031 241 aaKnown RBP13.88□□□□□ -0.19
HMGN1-207ENST00000436324 IGHV3-35A0A0C4DH35 117 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 GABARAPH6UMI1 98 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 CYB5BO43169 146 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 FOLR2P14207 255 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 TBPP20226 339 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 IL18Q14116 193 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 FAM106AQ4KMX7 169 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 FAAP20Q6NZ36 180 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 STEAP1BQ6NZ63 245 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 HSD17B13Q7Z5P4 300 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-207ENST00000436324 GPHB5Q86YW7 130 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 CADM3Q8N126 398 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 OR4A16Q8NH70 328 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 ZNF502Q8TBZ5 544 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 CACNG8Q8WXS5 425 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 TSC22D3Q99576 134 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 C6orf62Q9GZU0 229 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-207ENST00000436324 FAM212BQ9NTI7 297 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-207ENST00000436324 FKBP11Q9NYL4 201 aa13.87□□□□□ -0.19
HMGN1-207ENST00000436324 C15orf61A6NNL5 157 aa13.86□□□□□ -0.19
HMGN1-207ENST00000436324 LGALS9O00182 355 aa13.86□□□□□ -0.19
HMGN1-207ENST00000436324 CD74P04233 296 aa13.86□□□□□ -0.19
HMGN1-207ENST00000436324 PTBP1P26599 531 aaKnown RBP eCLIP13.86□□□□□ -0.19
HMGN1-207ENST00000436324 MFAP2P55001 183 aa13.86□□□□□ -0.19
HMGN1-207ENST00000436324 RND3P61587 244 aa13.86□□□□□ -0.19
HMGN1-207ENST00000436324 IZUMO4Q1ZYL8 232 aa13.86□□□□□ -0.19
HMGN1-207ENST00000436324 DEFB114Q30KQ6 69 aa13.86□□□□□ -0.19
HMGN1-207ENST00000436324 TERB2Q8NHR7 220 aa13.86□□□□□ -0.19
HMGN1-207ENST00000436324 ZNF486Q96H40 463 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-207ENST00000436324 TMEM56Q96MV1 263 aa13.86□□□□□ -0.19
HMGN1-207ENST00000436324 BCL7BQ9BQE9 202 aa13.86□□□□□ -0.19
HMGN1-207ENST00000436324 TMEM14BQ9NUH8 114 aa13.86□□□□□ -0.19
HMGN1-207ENST00000436324 F11RQ9Y624 299 aaKnown RBP13.86□□□□□ -0.19
HMGN1-207ENST00000436324 H3BMQ9 156 aa13.85□□□□□ -0.19
HMGN1-207ENST00000436324 GUCA2BQ16661 112 aa13.85□□□□□ -0.19
HMGN1-207ENST00000436324 SP6Q3SY56 376 aa13.85□□□□□ -0.19
HMGN1-207ENST00000436324 PLET1Q6UQ28 207 aa13.85□□□□□ -0.19
HMGN1-207ENST00000436324 GTSCR1Q86UQ5 136 aa13.85□□□□□ -0.19
HMGN1-207ENST00000436324 OR13C8Q8NGS7 320 aa13.85□□□□□ -0.19
HMGN1-207ENST00000436324 OR2K2Q8NGT1 345 aa13.85□□□□□ -0.19
HMGN1-207ENST00000436324 OR5B3Q8NH48 314 aa13.85□□□□□ -0.19
HMGN1-207ENST00000436324 ZFAND1Q8TCF1 268 aa13.85□□□□□ -0.19
HMGN1-207ENST00000436324 MARCH1Q8TCQ1 289 aa13.85□□□□□ -0.19
HMGN1-207ENST00000436324 TP53RKQ96S44 253 aa13.85□□□□□ -0.19
HMGN1-207ENST00000436324 THAP7Q9BT49 309 aaPredicted RBP13.85□□□□□ -0.19
HMGN1-207ENST00000436324 COPZ2Q9P299 210 aa13.85□□□□□ -0.19
HMGN1-207ENST00000436324 OR2T8A6NH00 312 aa13.84□□□□□ -0.19
HMGN1-207ENST00000436324 CBLN1P23435 193 aa13.84□□□□□ -0.19
HMGN1-207ENST00000436324 MRPS10P82664 201 aaKnown RBP13.84□□□□□ -0.19
HMGN1-207ENST00000436324 TM4SF20Q53R12 229 aa13.84□□□□□ -0.19
HMGN1-207ENST00000436324 SPINK9Q5DT21 86 aa13.84□□□□□ -0.19
HMGN1-207ENST00000436324 UNQ9165/PRO28630Q6UXU0 137 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms