RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 TRGV10A0A0A0MS01 117 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 DPRXA6NFQ7 191 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 GLRXP35754 106 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 FAM103A1Q9BTL3 118 aaKnown RBP12.85□□□□□ -0.35
SCARF1-203ENST00000434376 C11orf1Q9H5F2 150 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 SAP30LQ9HAJ7 183 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 TMEM140Q9NV12 185 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 SAA2-SAA4A0A096LPE2 208 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 MBD3L4A6NDZ8 208 aaPredicted RBP12.85□□□□□ -0.35
SCARF1-203ENST00000434376 MBD3L3A6NE82 208 aaPredicted RBP12.85□□□□□ -0.35
SCARF1-203ENST00000434376 MBD3L5A6NJ08 208 aaPredicted RBP12.85□□□□□ -0.35
SCARF1-203ENST00000434376 MGST3O14880 152 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 CRYABP02511 175 aaKnown RBP12.85□□□□□ -0.35
SCARF1-203ENST00000434376 REG1AP05451 166 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 SAA2P0DJI9 122 aaPredicted RBP12.85□□□□□ -0.35
SCARF1-203ENST00000434376 CT45A1Q5HYN5 189 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 CT45A3Q8NHU0 189 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 MBD3L2Q8NHZ7 208 aaPredicted RBP12.85□□□□□ -0.35
SCARF1-203ENST00000434376 CUBNO60494 3623 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 UTP20O75691 2785 aaKnown RBP12.85□□□□□ -0.35
SCARF1-203ENST00000434376 A0A1W2PPV4 95 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 TGOLN2O43493 480 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 KITLGP21583 273 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 DUTP33316 252 aaKnown RBP12.85□□□□□ -0.35
SCARF1-203ENST00000434376 C10orf55Q5SWW7 151 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 LYPD2Q6UXB3 125 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 TMEM108Q6UXF1 575 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 Q8TCH9 128 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 RAB24Q969Q5 203 aa12.85□□□□□ -0.35
SCARF1-203ENST00000434376 GUSBP1Q15486 140 aa12.84□□□□□ -0.35
SCARF1-203ENST00000434376 PRR31Q5SQ13 230 aa12.84□□□□□ -0.35
SCARF1-203ENST00000434376 CCDC168Q8NDH2 2452 aa12.84□□□□□ -0.35
SCARF1-203ENST00000434376 TMEM68Q96MH6 324 aa12.84□□□□□ -0.35
SCARF1-203ENST00000434376 AGMATQ9BSE5 352 aa12.84□□□□□ -0.35
SCARF1-203ENST00000434376 CTDSP1Q9GZU7 261 aa12.84□□□□□ -0.35
SCARF1-203ENST00000434376 ABCA12Q86UK0 2595 aa12.84□□□□□ -0.35
SCARF1-203ENST00000434376 HRASP01112 189 aa12.84□□□□□ -0.35
SCARF1-203ENST00000434376 IGLV1-44P01699 117 aa12.84□□□□□ -0.35
SCARF1-203ENST00000434376 PFN1P07737 140 aaKnown RBP12.84□□□□□ -0.35
SCARF1-203ENST00000434376 TNFSF4P23510 183 aa12.84□□□□□ -0.35
SCARF1-203ENST00000434376 THBS3P49746 956 aa12.84□□□□□ -0.35
SCARF1-203ENST00000434376 CNN1P51911 297 aaKnown RBP12.84□□□□□ -0.35
SCARF1-203ENST00000434376 RPL31P62899 125 aaKnown RBP12.84□□□□□ -0.35
SCARF1-203ENST00000434376 IGFL2Q6UWQ7 119 aa12.84□□□□□ -0.35
SCARF1-203ENST00000434376 OR10W1Q8NGF6 305 aa12.84□□□□□ -0.35
SCARF1-203ENST00000434376 IMMP2LQ96T52 175 aa12.84□□□□□ -0.35
SCARF1-203ENST00000434376 C19orf35Q6ZS72 473 aa12.83□□□□□ -0.35
SCARF1-203ENST00000434376 NEU1Q99519 415 aa12.83□□□□□ -0.35
SCARF1-203ENST00000434376 KBTBD11O94819 623 aa12.83□□□□□ -0.36
SCARF1-203ENST00000434376 GCGP01275 180 aa12.83□□□□□ -0.36
SCARF1-203ENST00000434376 TFPI2P48307 235 aa12.83□□□□□ -0.36
SCARF1-203ENST00000434376 KCNIP4Q6PIL6 250 aa12.83□□□□□ -0.36
SCARF1-203ENST00000434376 DERL1Q9BUN8 251 aa12.83□□□□□ -0.36
SCARF1-203ENST00000434376 ENY2Q9NPA8 101 aa12.83□□□□□ -0.36
SCARF1-203ENST00000434376 USP9XQ93008 2570 aaPredicted RBP12.83□□□□□ -0.36
SCARF1-203ENST00000434376 LSM10Q969L4 123 aaKnown RBP12.83□□□□□ -0.36
SCARF1-203ENST00000434376 TUBG2Q9NRH3 451 aa12.83□□□□□ -0.36
SCARF1-203ENST00000434376 PTPN13Q12923 2485 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 TRBV6-6A0A0A6YYG2 114 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 C15orf65H3BRN8 121 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 COX7A1P24310 79 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 CHRNB4P30926 498 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 LGALS4P56470 323 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 CYP2G1PQ6ZSU1 146 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 ACY3Q96HD9 319 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 SAMD10Q9BYL1 202 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 HES4Q9HCC6 221 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 NAGKQ9UJ70 344 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 RAXQ9Y2V3 346 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 C11orf94C9JXX5 98 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 NUPR1O60356 82 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 CD24P25063 80 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 LRRC75BQ2VPJ9 315 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 VN1R17PQ8TDU5 208 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 FAM216AQ8WUB2 273 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 ACTR3CQ9C0K3 210 aaPredicted RBP12.82□□□□□ -0.36
SCARF1-203ENST00000434376 NDUFB4O95168 129 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 NPSP0C0P6 89 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 TDRG1Q3Y452 100 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 FAM57AQ8TBR7 257 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 HIPK2Q9H2X6 1198 aa12.82□□□□□ -0.36
SCARF1-203ENST00000434376 TRAV34A0A0B4J273 112 aa12.81□□□□□ -0.36
SCARF1-203ENST00000434376 C1QTNF9P0C862 333 aa12.81□□□□□ -0.36
SCARF1-203ENST00000434376 LBHQ53QV2 105 aaPredicted RBP12.81□□□□□ -0.36
SCARF1-203ENST00000434376 DPPA3Q6W0C5 159 aa12.81□□□□□ -0.36
SCARF1-203ENST00000434376 RBM14Q96PK6 669 aaKnown RBP12.81□□□□□ -0.36
SCARF1-203ENST00000434376 SLC25A10Q9UBX3 287 aaPredicted RBP12.81□□□□□ -0.36
SCARF1-203ENST00000434376 GOLT1BQ9Y3E0 138 aa12.81□□□□□ -0.36
SCARF1-203ENST00000434376 NOTCH2Q04721 2471 aa12.81□□□□□ -0.36
SCARF1-203ENST00000434376 DUXBA0A1W2PPF3 345 aa12.81□□□□□ -0.36
SCARF1-203ENST00000434376 ATP5G3P48201 142 aa12.81□□□□□ -0.36
SCARF1-203ENST00000434376 GNB1P62873 340 aa12.81□□□□□ -0.36
SCARF1-203ENST00000434376 C1orf162Q8NEQ5 155 aaPredicted RBP12.81□□□□□ -0.36
SCARF1-203ENST00000434376 OR10X1Q8NGY0 326 aa12.81□□□□□ -0.36
SCARF1-203ENST00000434376 SGMS2Q8NHU3 365 aa12.81□□□□□ -0.36
SCARF1-203ENST00000434376 TMEM242Q9NWH2 141 aa12.81□□□□□ -0.36
SCARF1-203ENST00000434376 OR6C3Q9NZP0 311 aa12.81□□□□□ -0.36
SCARF1-203ENST00000434376 PPIAL4AQ9Y536 164 aa12.81□□□□□ -0.36
SCARF1-203ENST00000434376 IL3RAP26951 378 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 OR5I1Q13606 314 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms