RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 PRSS54Q6PEW0 395 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 SLC25A34Q6PIV7 304 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 SBSNQ6UWP8 590 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 CLEC19AQ6UXS0 136 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 UNQ9165/PRO28630Q6UXU0 137 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 FBXW12Q6X9E4 464 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 SCGB1D4Q6XE38 83 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 Q6ZRU5 148 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 ZNF767PQ75MW2 155 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 PRNTQ86SH4 94 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 PCP2Q8IVA1 136 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 C20orf196Q8IYI0 205 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 MMGT1Q8N4V1 131 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 ZDHHC22Q8N966 263 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 ZNF709Q8N972 641 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 OR5A1Q8NGJ0 315 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 OR51A4Q8NGJ6 313 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 SLC25A40Q8TBP6 338 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 FAM3DQ96BQ1 224 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 GPR146Q96CH1 333 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 ADAT3Q96EY9 351 aaPredicted RBP1.76□□□□□ -2.13
CLK1-204ENST00000432425 CNBD2Q96M20 576 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 TSPAN32Q96QS1 320 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 OR2M4Q96R27 311 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 MGLLQ99685 303 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 MRPL57Q9BQC6 102 aaKnown RBP1.76□□□□□ -2.13
CLK1-204ENST00000432425 PSMG3Q9BT73 122 aaPredicted RBP1.76□□□□□ -2.13
CLK1-204ENST00000432425 ADAT1Q9BUB4 502 aaKnown RBP1.76□□□□□ -2.13
CLK1-204ENST00000432425 NOX3Q9HBY0 568 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 CCL28Q9NRJ3 127 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 SPANXCQ9NY87 97 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 SCP2D1Q9UJQ7 156 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 ANAPC10Q9UM13 185 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 BOKQ9UMX3 212 aaPredicted RBP1.76□□□□□ -2.13
CLK1-204ENST00000432425 KLF13Q9Y2Y9 288 aaPredicted RBP1.76□□□□□ -2.13
CLK1-204ENST00000432425 COQ4Q9Y3A0 265 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 KCNE3Q9Y6H6 103 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 UBR2Q8IWV8 1755 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 KIF20BQ96Q89 1820 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 ANKRD31Q8N7Z5 1873 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 CHD3Q12873 2000 aaKnown RBP1.75□□□□□ -2.13
CLK1-204ENST00000432425 IGLV11-55A0A075B6I3 123 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 TRAV8-3A0A0A6YYJ7 113 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 TRAV38-1A0A0B4J264 116 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 SMIM31A0A1B0GVY4 71 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 J3QQQ9 107 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 ISLRO14498 428 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 TRBV12-3P01733 135 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 SMIM17P0DL12 118 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 INAFM2P0DMQ5 153 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 GADD45AP24522 165 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 LPAR6P43657 344 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 DAD1P61803 113 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 PSG9Q00887 426 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 FABP5Q01469 135 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 EIF3IQ13347 325 aaKnown RBP1.75□□□□□ -2.13
CLK1-204ENST00000432425 ENDOGQ14249 297 aaKnown RBP1.75□□□□□ -2.13
CLK1-204ENST00000432425 KIAA0087Q14695 138 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 BATFQ16520 125 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 SP6Q3SY56 376 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 C6orf99Q4VX62 202 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 PYY3Q5JQD4 70 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 COL5A1-AS1Q5SY13 56 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 LYRM7Q5U5X0 104 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 WDR59Q6PJI9 974 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 ZNF493Q6ZR52 646 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 TCF23Q7RTU1 214 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 VN1R4Q7Z5H5 301 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 TCTE3Q8IZS6 198 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 LINC00471Q8N535 108 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 TMEM75Q8N9X5 138 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 OR11H7Q8NGC8 314 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 OR2T27Q8NH04 317 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 OR5K1Q8NHB7 308 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 LMX1AQ8TE12 382 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 GALNT14Q96FL9 552 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 ERMAPQ96PL5 475 aaPredicted RBP1.75□□□□□ -2.13
CLK1-204ENST00000432425 SFXN3Q9BWM7 321 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 ZNF436Q9C0F3 470 aaPredicted RBP1.75□□□□□ -2.13
CLK1-204ENST00000432425 CXorf21Q9HAI6 301 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 PARP11Q9NR21 331 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 HEBP1Q9NRV9 189 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 PCTPQ9UKL6 214 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 NFASCO94856 1347 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 TMEM2Q9UHN6 1383 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 PZPP20742 1482 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 ZFYVE16Q7Z3T8 1539 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 KDM5DQ9BY66 1539 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 PARP14Q460N5 1801 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 NLRC5Q86WI3 1866 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 MYH13Q9UKX3 1938 aa1.75□□□□□ -2.13
CLK1-204ENST00000432425 EML6Q6ZMW3 1958 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 DENND4CQ5VZ89 1909 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ANAPC1Q9H1A4 1944 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 N4BP2Q86UW6 1770 aaPredicted RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 CPSF1Q10570 1443 aaKnown RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 ARHGAP31Q2M1Z3 1444 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ANKRD36BQ8N2N9 1353 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 IGKV1-27A0A075B6S5 117 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 TRAV39A0A0B4J263 110 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms