RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 DEFB135Q30KP9 77 aa10.61□□□□□ -0.71
SMARCE1-205ENST00000431889 OR5AP2Q8NGF4 316 aa10.61□□□□□ -0.71
SMARCE1-205ENST00000431889 OR4A5Q8NH83 315 aa10.61□□□□□ -0.71
SMARCE1-205ENST00000431889 CXorf58Q96LI9 332 aa10.61□□□□□ -0.71
SMARCE1-205ENST00000431889 CHRDL1Q9BU40 450 aa10.61□□□□□ -0.71
SMARCE1-205ENST00000431889 IFT46Q9NQC8 304 aa10.61□□□□□ -0.71
SMARCE1-205ENST00000431889 ETV7Q9Y603 341 aa10.61□□□□□ -0.71
SMARCE1-205ENST00000431889 IGKV3-7A0A075B6H7 116 aa10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 CXorf65A6NEN9 183 aa10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 DBX1A6NMT0 343 aa10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 TGOLN2O43493 480 aa10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 MRPS14O60783 128 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 LY6G6CO95867 125 aa10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 KRASP01116 189 aa10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 HERV-K104P61576 105 aa10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 IL17DQ8TAD2 202 aa10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 ZNF2Q9BSG1 426 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 QTRT1Q9BXR0 403 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 DIABLOQ9NR28 239 aa10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 TRAPPC2P0DI81 140 aa10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 TRAPPC2BP0DI82 140 aa10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 LPAR6P43657 344 aa10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 OR5B3Q8NH48 314 aa10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 FCAMRQ8WWV6 532 aa10.6□□□□□ -0.71
SMARCE1-205ENST00000431889 MARCH11A6NNE9 402 aa10.59□□□□□ -0.71
SMARCE1-205ENST00000431889 PGLYRP1O75594 196 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-205ENST00000431889 SERPINE2P07093 398 aa10.59□□□□□ -0.71
SMARCE1-205ENST00000431889 TFPI2P48307 235 aa10.59□□□□□ -0.71
SMARCE1-205ENST00000431889 PHLDA2Q53GA4 152 aa10.59□□□□□ -0.71
SMARCE1-205ENST00000431889 APRG1Q8IVJ8 170 aa10.59□□□□□ -0.71
SMARCE1-205ENST00000431889 OR2C3Q8N628 320 aa10.59□□□□□ -0.71
SMARCE1-205ENST00000431889 GDPD1Q8N9F7 314 aa10.59□□□□□ -0.71
SMARCE1-205ENST00000431889 ZBTB34Q8NCN2 500 aa10.59□□□□□ -0.71
SMARCE1-205ENST00000431889 GIMAP1Q8WWP7 306 aa10.59□□□□□ -0.71
SMARCE1-205ENST00000431889 FXYD6Q9H0Q3 95 aa10.59□□□□□ -0.71
SMARCE1-205ENST00000431889 MRPL27Q9P0M9 148 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-205ENST00000431889 UFC1Q9Y3C8 167 aa10.59□□□□□ -0.71
SMARCE1-205ENST00000431889 IGHV3OR16-13A0A075B7E8 117 aa10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 IGHV3-74A0A0B4J1X5 117 aa10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 F8W735 103 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 RBFOX2O43251 390 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 C8orf88P0DMB2 117 aa10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 PTBP1P26599 531 aaKnown RBP eCLIP10.58□□□□□ -0.722e-22■■■■■ 51.6
SMARCE1-205ENST00000431889 HLA-DMAP28067 261 aa10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 KLK9Q2XQG4 91 aa10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 Q56UQ5 140 aa10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 SCARB1Q8WTV0 552 aa10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 TMEM190Q8WZ59 177 aa10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 ZNF436Q9C0F3 470 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 PLEKHA2Q9HB19 425 aa10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 KLK9Q9UKQ9 250 aa10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 OR51B2Q9Y5P1 312 aa10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 KMT2AQ03164 3969 aa10.58□□□□□ -0.72
SMARCE1-205ENST00000431889 RPS19P39019 145 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-205ENST00000431889 TAS2R20P59543 309 aa10.57□□□□□ -0.72
SMARCE1-205ENST00000431889 ERVK-16P61578 105 aa10.57□□□□□ -0.72
SMARCE1-205ENST00000431889 POU2AF1Q16633 256 aa10.57□□□□□ -0.72
SMARCE1-205ENST00000431889 ANKRD55Q3KP44 614 aa10.57□□□□□ -0.72
SMARCE1-205ENST00000431889 ODF3L2Q3SX64 289 aa10.57□□□□□ -0.72
SMARCE1-205ENST00000431889 SPINK9Q5DT21 86 aa10.57□□□□□ -0.72
SMARCE1-205ENST00000431889 LYG2Q86SG7 212 aa10.57□□□□□ -0.72
SMARCE1-205ENST00000431889 SAMD12Q8N8I0 201 aa10.57□□□□□ -0.72
SMARCE1-205ENST00000431889 AIFM2Q9BRQ8 373 aa10.57□□□□□ -0.72
SMARCE1-205ENST00000431889 Q9H521 79 aa10.57□□□□□ -0.72
SMARCE1-205ENST00000431889 THYN1Q9P016 225 aa10.57□□□□□ -0.72
SMARCE1-205ENST00000431889 XRCC3O43542 346 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 SPRY2O43597 315 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 FCGR2BP31994 310 aaPredicted RBP10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 ADMP35318 185 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 TNFRSF9Q07011 255 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 MSMO1Q15800 293 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 RNASE12Q5GAN4 147 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 TMEM69Q5SWH9 247 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 GBGT1Q8N5D6 347 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 TSPAN14Q8NG11 270 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 OR1L8Q8NGR8 309 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 OR5H2Q8NGV7 314 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 LINC00476Q8WZB0 136 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 MOB3AQ96BX8 217 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 S100A16Q96FQ6 103 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 ZNF414Q96IQ9 312 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 NDUFA4L2Q9NRX3 87 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 C21orf62Q9NYP8 219 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 K7EIM0 57 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 CTSDP07339 412 aaPredicted RBP10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 F2RP25116 425 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 HRH1P35367 487 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 IZUMO4Q1ZYL8 232 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 UBE2NLQ5JXB2 153 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 SLC38A6Q8IZM9 456 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 VN1R17PQ8TDU5 208 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 DGCR14Q96DF8 476 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 MISP3Q96FF7 219 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 C5orf66Q9H5L9 145 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 COMMD9Q9P000 198 aa10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 F11RQ9Y624 299 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-205ENST00000431889 A0A0A6YYH2 397 aa10.55□□□□□ -0.72
SMARCE1-205ENST00000431889 A6NJ64 397 aa10.55□□□□□ -0.72
SMARCE1-205ENST00000431889 SNAPC5O75971 98 aa10.55□□□□□ -0.72
SMARCE1-205ENST00000431889 YIF1AO95070 293 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms