RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 A0A1B0GTL3 188 aa14.08□□□□□ -0.16
RIF1-204ENST00000430328 GFI1BQ5VTD9 330 aa14.08□□□□□ -0.16
RIF1-204ENST00000430328 GDF15Q99988 308 aa14.08□□□□□ -0.16
RIF1-204ENST00000430328 GBF1Q92538 1859 aa14.08□□□□□ -0.16
RIF1-204ENST00000430328 FDCSPQ8NFU4 85 aa14.07□□□□□ -0.16
RIF1-204ENST00000430328 DUTP33316 252 aaKnown RBP14.07□□□□□ -0.16
RIF1-204ENST00000430328 GAGE2AQ6NT46 116 aa14.07□□□□□ -0.16
RIF1-204ENST00000430328 TCF19Q9Y242 345 aa14.07□□□□□ -0.16
RIF1-204ENST00000430328 SCN11AQ9UI33 1791 aa14.07□□□□□ -0.16
RIF1-204ENST00000430328 TRACP01848 142 aa14.07□□□□□ -0.16
RIF1-204ENST00000430328 EGR1P18146 543 aa14.07□□□□□ -0.16
RIF1-204ENST00000430328 TMEM30BQ3MIR4 351 aa14.07□□□□□ -0.16
RIF1-204ENST00000430328 UCP2P55851 309 aa14.07□□□□□ -0.16
RIF1-204ENST00000430328 CD5LO43866 347 aa14.07□□□□□ -0.16
RIF1-204ENST00000430328 CD7P09564 240 aa14.07□□□□□ -0.16
RIF1-204ENST00000430328 TUBGCP6Q96RT7 1819 aa14.07□□□□□ -0.16
RIF1-204ENST00000430328 ERVH48-1M5A8F1 160 aa14.07□□□□□ -0.16
RIF1-204ENST00000430328 CGAP01215 116 aa14.07□□□□□ -0.16
RIF1-204ENST00000430328 TRGV3P03979 118 aa14.07□□□□□ -0.16
RIF1-204ENST00000430328 SCO2A0A1W2PP80 73 aa14.06□□□□□ -0.16
RIF1-204ENST00000430328 LINC01549A6NIU2 74 aa14.06□□□□□ -0.16
RIF1-204ENST00000430328 LINC01559Q495D7 138 aa14.06□□□□□ -0.16
RIF1-204ENST00000430328 WDR81Q562E7 1941 aa14.06□□□□□ -0.16
RIF1-204ENST00000430328 IGLV3-27P01718 113 aa14.06□□□□□ -0.16
RIF1-204ENST00000430328 LAMB1P07942 1786 aa14.06□□□□□ -0.16
RIF1-204ENST00000430328 IGHV3-64A0A075B6Q5 118 aa14.06□□□□□ -0.16
RIF1-204ENST00000430328 TCRBV5S1A1TA0A578 114 aa14.06□□□□□ -0.16
RIF1-204ENST00000430328 GTF3AQ92664 365 aaKnown RBP14.06□□□□□ -0.16
RIF1-204ENST00000430328 RGPD2P0DJD1 1756 aa14.06□□□□□ -0.16
RIF1-204ENST00000430328 IGHV3-66A0A0C4DH42 116 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 CHCHD1Q96BP2 118 aaKnown RBP14.05□□□□□ -0.16
RIF1-204ENST00000430328 ZNF385AQ96PM9 386 aaKnown RBP14.05□□□□□ -0.16
RIF1-204ENST00000430328 ASCL2Q99929 193 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 PPBPP02775 128 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 CT62P0C5K7 136 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 NPC2P61916 151 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 LRP10Q7Z4F1 713 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 GPBAR1Q8TDU6 330 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 SPANXDQ9BXN6 97 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 IGHV3-35A0A0C4DH35 117 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 ZNF625Q96I27 306 aaPredicted RBP14.05□□□□□ -0.16
RIF1-204ENST00000430328 PTGDSP41222 190 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 TMEM186Q96B77 213 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 LHX9Q9NQ69 397 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 CT55Q8WUE5 264 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 UCN2Q96RP3 112 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 C1orf43Q9BWL3 253 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 A0A1W2PPC1 479 aa14.05□□□□□ -0.16
RIF1-204ENST00000430328 NTN1O95631 604 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 SPRED2Q7Z698 418 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 PROB1E7EW31 1015 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 CLEC7AQ9BXN2 247 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 PPIAL4CA0A0B4J2A2 164 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 FAM90A10PA6NDY2 464 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 FAM90A18PA6NE21 464 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 FAM90A16PA6NEW6 464 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 FAM90A20PA6NIJ5 464 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 FAM90A8PA6NJQ4 464 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 FAM90A7PA6NKC0 464 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 FAM90A22PA8MWA6 464 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 FAM90A12PA8MX19 464 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 FAM90A5PA8MXJ8 464 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 FAM90A23PA8MXZ1 464 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 LEPROTO15243 131 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 FAM90A15PP0C7V4 464 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 FAM90A13PP0C7W8 464 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 FAM90A14PP0C7W9 464 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 FAM90A24PP0C7X0 464 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 PPIAL4GP0DN37 164 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 COX6B1P14854 86 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 VEGFBP49765 207 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 RCC1LQ96I51 464 aaKnown RBP14.04□□□□□ -0.16
RIF1-204ENST00000430328 STHQ8IWL8 128 aa14.04□□□□□ -0.16
RIF1-204ENST00000430328 HOXB1P14653 301 aaPredicted RBP14.04□□□□□ -0.16
RIF1-204ENST00000430328 FSTP19883 344 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 C1QL3Q5VWW1 255 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 FABP5P3A8MUU1 101 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 ADMP35318 185 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 PLCE1Q9P212 2302 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 IGKV1D-42A0A075B6H8 117 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 LOC105371242A0A075B767 164 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 C21orf140B9A014 251 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 H3BMM0 161 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 EFNB1P98172 346 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 LDLRAD1Q5T700 205 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 UBE2WQ96B02 151 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 IGHV3-49A0A0A0MS15 119 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 PNKDQ8N490 385 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 HS3ST3B1Q9Y662 390 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 SHANK1Q9Y566 2161 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 TRGV4A0A0C4DH28 118 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 CCL1P22362 96 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 P2RY6Q15077 328 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 TCTEX1D4Q5JR98 221 aa14.03□□□□□ -0.16
RIF1-204ENST00000430328 PPP1R3EQ9H7J1 279 aa14.02□□□□□ -0.16
RIF1-204ENST00000430328 DEFB124Q8NES8 71 aa14.02□□□□□ -0.16
RIF1-204ENST00000430328 IFI27L1Q96BM0 104 aa14.02□□□□□ -0.16
RIF1-204ENST00000430328 C5orf66Q9H5L9 145 aa14.02□□□□□ -0.16
RIF1-204ENST00000430328 ATP5L2Q7Z4Y8 100 aa14.02□□□□□ -0.16
RIF1-204ENST00000430328 JPT1Q9UK76 154 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms